RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
GHDC-203ENST00000428494 NCOA1Q15788 1441 aa21.67■■□□□ 1.06
GHDC-203ENST00000428494 CNGB1Q14028 1251 aaPredicted RBP21.67■■□□□ 1.06
GHDC-203ENST00000428494 AKNAQ7Z591 1439 aa21.66■■□□□ 1.06
GHDC-203ENST00000428494 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
GHDC-203ENST00000428494 MIA2Q96PC5 1412 aa21.65■■□□□ 1.06
GHDC-203ENST00000428494 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
GHDC-203ENST00000428494 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
GHDC-203ENST00000428494 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.05
GHDC-203ENST00000428494 KIF7Q2M1P5 1343 aa21.63■■□□□ 1.05
GHDC-203ENST00000428494 PPP4R2Q9NY27 417 aa21.63■■□□□ 1.05
GHDC-203ENST00000428494 IQGAP2Q13576 1575 aa21.62■■□□□ 1.05
GHDC-203ENST00000428494 B4GALNT3Q6L9W6 998 aa21.62■■□□□ 1.05
GHDC-203ENST00000428494 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
GHDC-203ENST00000428494 DAPK1P53355 1430 aa21.6■■□□□ 1.05
GHDC-203ENST00000428494 FANCIQ9NVI1 1328 aa21.59■■□□□ 1.05
GHDC-203ENST00000428494 WDR62O43379 1518 aa21.59■■□□□ 1.05
GHDC-203ENST00000428494 ABCC5O15440 1437 aa21.58■■□□□ 1.05
GHDC-203ENST00000428494 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
GHDC-203ENST00000428494 TEX14Q8IWB6 1497 aa21.57■■□□□ 1.04
GHDC-203ENST00000428494 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
GHDC-203ENST00000428494 SENP3-EIF4A1A0A087X0R7 540 aa21.56■■□□□ 1.04
GHDC-203ENST00000428494 ERICH6BQ5W0A0 696 aa21.56■■□□□ 1.04
GHDC-203ENST00000428494 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
GHDC-203ENST00000428494 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
GHDC-203ENST00000428494 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
GHDC-203ENST00000428494 ROCK1Q13464 1354 aa21.53■■□□□ 1.04
GHDC-203ENST00000428494 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
GHDC-203ENST00000428494 DNMT1P26358 1616 aaKnown RBP21.48■■□□□ 1.03
GHDC-203ENST00000428494 ERICH6Q7L0X2 663 aa21.48■■□□□ 1.03
GHDC-203ENST00000428494 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
GHDC-203ENST00000428494 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
GHDC-203ENST00000428494 PZPP20742 1482 aa21.44■■□□□ 1.02
GHDC-203ENST00000428494 DHX29Q7Z478 1369 aaKnown RBP21.44■■□□□ 1.02
GHDC-203ENST00000428494 CFDP1Q9UEE9 299 aaPredicted RBP21.44■■□□□ 1.02
GHDC-203ENST00000428494 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
GHDC-203ENST00000428494 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
GHDC-203ENST00000428494 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
GHDC-203ENST00000428494 PKD2Q13563 968 aa21.42■■□□□ 1.02
GHDC-203ENST00000428494 USP47Q96K76 1375 aa21.41■■□□□ 1.02
GHDC-203ENST00000428494 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
GHDC-203ENST00000428494 BCORL1Q5H9F3 1711 aa21.39■■□□□ 1.01
GHDC-203ENST00000428494 KIAA0556O60303 1618 aa21.38■■□□□ 1.01
GHDC-203ENST00000428494 KIAA0586Q9BVV6 1533 aa21.36■■□□□ 1.01
GHDC-203ENST00000428494 CAMSAP2Q08AD1 1489 aa21.36■■□□□ 1.01
GHDC-203ENST00000428494 SMG6Q86US8 1419 aaKnown RBP21.35■■□□□ 1.01
GHDC-203ENST00000428494 RAPGEF6Q8TEU7 1601 aa21.35■■□□□ 1.01
GHDC-203ENST00000428494 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
GHDC-203ENST00000428494 KIAA1107Q9UPP5 1409 aa21.34■■□□□ 1.01
GHDC-203ENST00000428494 MBD5Q9P267 1494 aa21.34■■□□□ 1.01
GHDC-203ENST00000428494 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
GHDC-203ENST00000428494 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
GHDC-203ENST00000428494 GPATCH8Q9UKJ3 1502 aaKnown RBP21.31■■□□□ 1
GHDC-203ENST00000428494 PNISRQ8TF01 805 aaKnown RBP21.31■■□□□ 1
GHDC-203ENST00000428494 KDM2AQ9Y2K7 1162 aa21.31■■□□□ 1
GHDC-203ENST00000428494 PLB1Q6P1J6 1458 aa21.3■■□□□ 1
GHDC-203ENST00000428494 TMC1Q8TDI8 760 aa21.3■■□□□ 1
GHDC-203ENST00000428494 CCDC136Q96JN2 1154 aa21.29■■□□□ 1
GHDC-203ENST00000428494 CARD11Q9BXL7 1154 aa21.28■■□□□ 1
GHDC-203ENST00000428494 KIF14Q15058 1648 aa21.28■■□□□ 1
GHDC-203ENST00000428494 RNF123Q5XPI4 1314 aa21.27■■□□□ 1
GHDC-203ENST00000428494 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
GHDC-203ENST00000428494 KDM5CP41229 1560 aa21.26■□□□□ 0.99
GHDC-203ENST00000428494 ST20-MTHFSA0A0A6YYL1 179 aa21.25■□□□□ 0.99
GHDC-203ENST00000428494 FBLN2P98095 1184 aa21.25■□□□□ 0.99
GHDC-203ENST00000428494 ANKRD30AQ9BXX3 1397 aa21.25■□□□□ 0.99
GHDC-203ENST00000428494 ANKRD50Q9ULJ7 1429 aa21.25■□□□□ 0.99
GHDC-203ENST00000428494 GRIN2AQ12879 1464 aa21.25■□□□□ 0.99
GHDC-203ENST00000428494 NUP155O75694 1391 aa21.25■□□□□ 0.99
GHDC-203ENST00000428494 IFT140Q96RY7 1462 aa21.23■□□□□ 0.99
GHDC-203ENST00000428494 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
GHDC-203ENST00000428494 ADGBQ8N7X0 1667 aa21.22■□□□□ 0.99
GHDC-203ENST00000428494 ADGRL2O95490 1459 aa21.21■□□□□ 0.99
GHDC-203ENST00000428494 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
GHDC-203ENST00000428494 SALL2Q9Y467 1007 aaPredicted RBP21.21■□□□□ 0.99
GHDC-203ENST00000428494 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
GHDC-203ENST00000428494 DCAF11Q8TEB1 546 aa21.21■□□□□ 0.99
GHDC-203ENST00000428494 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
GHDC-203ENST00000428494 NBR1Q14596 966 aa21.19■□□□□ 0.98
GHDC-203ENST00000428494 ITSN2Q9NZM3 1697 aa21.18■□□□□ 0.98
GHDC-203ENST00000428494 UHRF1BP1Q6BDS2 1440 aa21.17■□□□□ 0.98
GHDC-203ENST00000428494 RALGAPBQ86X10 1494 aa21.17■□□□□ 0.98
GHDC-203ENST00000428494 CROCC2H7BZ55 1655 aa21.16■□□□□ 0.98
GHDC-203ENST00000428494 KIF15Q9NS87 1388 aa21.16■□□□□ 0.98
GHDC-203ENST00000428494 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
GHDC-203ENST00000428494 HNRNPMP52272 730 aaKnown RBP eCLIP21.15■□□□□ 0.98
GHDC-203ENST00000428494 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.98
GHDC-203ENST00000428494 JPH4Q96JJ6 628 aa21.14■□□□□ 0.98
GHDC-203ENST00000428494 DEKP35659 375 aaKnown RBP21.14■□□□□ 0.97
GHDC-203ENST00000428494 EIF4G3O43432 1585 aaKnown RBP21.13■□□□□ 0.97
GHDC-203ENST00000428494 C9orf84Q5VXU9 1444 aa21.13■□□□□ 0.97
GHDC-203ENST00000428494 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
GHDC-203ENST00000428494 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
GHDC-203ENST00000428494 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
GHDC-203ENST00000428494 LRPPRCP42704 1394 aaKnown RBP21.12■□□□□ 0.97
GHDC-203ENST00000428494 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
GHDC-203ENST00000428494 EXOC6Q8TAG9 804 aa21.1■□□□□ 0.97
GHDC-203ENST00000428494 ADCY10Q96PN6 1610 aa21.1■□□□□ 0.97
GHDC-203ENST00000428494 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
GHDC-203ENST00000428494 RALBP1Q15311 655 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms