RNA–Protein interactions for RNA: ENST00000428308.6

PAPD4-203, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-203ENST00000428308 KIAA0556O60303 1618 aa10□□□□□ -0.81
PAPD4-203ENST00000428308 CARMIL2Q6F5E8 1435 aa10□□□□□ -0.81
PAPD4-203ENST00000428308 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
PAPD4-203ENST00000428308 FHOD3Q2V2M9 1422 aa9.99□□□□□ -0.81
PAPD4-203ENST00000428308 KDM6BO15054 1643 aa9.99□□□□□ -0.81
PAPD4-203ENST00000428308 KIF21BO75037 1637 aa9.99□□□□□ -0.81
PAPD4-203ENST00000428308 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
PAPD4-203ENST00000428308 EEA1Q15075 1411 aa9.98□□□□□ -0.81
PAPD4-203ENST00000428308 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
PAPD4-203ENST00000428308 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
PAPD4-203ENST00000428308 PROM2Q8N271 834 aa9.97□□□□□ -0.81
PAPD4-203ENST00000428308 UGGT2Q9NYU1 1516 aa9.97□□□□□ -0.81
PAPD4-203ENST00000428308 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.82
PAPD4-203ENST00000428308 GOLGA3Q08378 1498 aa9.96□□□□□ -0.82
PAPD4-203ENST00000428308 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
PAPD4-203ENST00000428308 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
PAPD4-203ENST00000428308 ATP1B4Q9UN42 357 aaPredicted RBP9.94□□□□□ -0.82
PAPD4-203ENST00000428308 EPRSP07814 1512 aaKnown RBP9.92□□□□□ -0.82
PAPD4-203ENST00000428308 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
PAPD4-203ENST00000428308 UHRF1BP1LA0JNW5 1464 aa9.92□□□□□ -0.82
PAPD4-203ENST00000428308 SAMD9Q5K651 1589 aa9.91□□□□□ -0.82
PAPD4-203ENST00000428308 CHGAP10645 457 aaKnown RBP9.91□□□□□ -0.82
PAPD4-203ENST00000428308 KDM5BQ9UGL1 1544 aa9.91□□□□□ -0.82
PAPD4-203ENST00000428308 ADGRL1O94910 1474 aa9.91□□□□□ -0.82
PAPD4-203ENST00000428308 ARHGAP35Q9NRY4 1499 aa9.91□□□□□ -0.82
PAPD4-203ENST00000428308 ARID3AQ99856 593 aa9.9□□□□□ -0.83
PAPD4-203ENST00000428308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.89□□□□□ -0.83
PAPD4-203ENST00000428308 HNRNPUL2Q1KMD3 747 aaKnown RBP9.89□□□□□ -0.83
PAPD4-203ENST00000428308 PPRC1Q5VV67 1664 aaKnown RBP9.89□□□□□ -0.83
PAPD4-203ENST00000428308 ZCCHC11Q5TAX3 1644 aaKnown RBP9.88□□□□□ -0.83
PAPD4-203ENST00000428308 GLI2P10070 1586 aa9.87□□□□□ -0.83
PAPD4-203ENST00000428308 CD109Q6YHK3 1445 aa9.86□□□□□ -0.83
PAPD4-203ENST00000428308 ABCA8O94911 1581 aa9.86□□□□□ -0.83
PAPD4-203ENST00000428308 CDK13Q14004 1512 aaKnown RBP9.85□□□□□ -0.83
PAPD4-203ENST00000428308 WDR7Q9Y4E6 1490 aa9.85□□□□□ -0.83
PAPD4-203ENST00000428308 LRRIQ1Q96JM4 1722 aa9.85□□□□□ -0.83
PAPD4-203ENST00000428308 ZBTB7CA1YPR0 619 aa9.84□□□□□ -0.83
PAPD4-203ENST00000428308 RAPGEF3O95398 923 aa9.84□□□□□ -0.83
PAPD4-203ENST00000428308 ZMYND15Q9H091 742 aa9.84□□□□□ -0.83
PAPD4-203ENST00000428308 NUP153P49790 1475 aaKnown RBP9.84□□□□□ -0.83
PAPD4-203ENST00000428308 CLIP1P30622 1438 aa9.84□□□□□ -0.83
PAPD4-203ENST00000428308 NEUROD2Q15784 382 aa9.84□□□□□ -0.83
PAPD4-203ENST00000428308 RSPH6AQ9H0K4 717 aa9.84□□□□□ -0.83
PAPD4-203ENST00000428308 RAPGEF6Q8TEU7 1601 aa9.84□□□□□ -0.83
PAPD4-203ENST00000428308 CEP162Q5TB80 1403 aa9.83□□□□□ -0.84
PAPD4-203ENST00000428308 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
PAPD4-203ENST00000428308 ATP10BO94823 1461 aa9.82□□□□□ -0.84
PAPD4-203ENST00000428308 MAP3K4Q9Y6R4 1608 aa9.82□□□□□ -0.84
PAPD4-203ENST00000428308 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
PAPD4-203ENST00000428308 PCF11O94913 1555 aaKnown RBP9.81□□□□□ -0.84
PAPD4-203ENST00000428308 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
PAPD4-203ENST00000428308 LMOD2Q6P5Q4 547 aa9.8□□□□□ -0.84
PAPD4-203ENST00000428308 NECTIN2Q92692 538 aa9.8□□□□□ -0.84
PAPD4-203ENST00000428308 EFCAB5A4FU69 1503 aa9.79□□□□□ -0.84
PAPD4-203ENST00000428308 IGSF3O75054 1194 aa9.78□□□□□ -0.84
PAPD4-203ENST00000428308 HECW2Q9P2P5 1572 aa9.78□□□□□ -0.84
PAPD4-203ENST00000428308 MAGI3Q5TCQ9 1506 aa9.77□□□□□ -0.84
PAPD4-203ENST00000428308 PPARGC1BQ86YN6 1023 aaKnown RBP9.76□□□□□ -0.85
PAPD4-203ENST00000428308 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
PAPD4-203ENST00000428308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
PAPD4-203ENST00000428308 ARID4BQ4LE39 1312 aaPredicted RBP9.75□□□□□ -0.85
PAPD4-203ENST00000428308 CACNB1Q02641 598 aaPredicted RBP9.75□□□□□ -0.85
PAPD4-203ENST00000428308 KIF14Q15058 1648 aa9.74□□□□□ -0.85
PAPD4-203ENST00000428308 FMN1Q68DA7 1419 aa9.74□□□□□ -0.85
PAPD4-203ENST00000428308 TTC37Q6PGP7 1564 aa9.72□□□□□ -0.85
PAPD4-203ENST00000428308 HECW1Q76N89 1606 aa9.72□□□□□ -0.85
PAPD4-203ENST00000428308 HOXD11P31277 338 aaPredicted RBP9.71□□□□□ -0.85
PAPD4-203ENST00000428308 HSPA2P54652 639 aa9.71□□□□□ -0.85
PAPD4-203ENST00000428308 PLEKHD1A6NEE1 506 aa9.71□□□□□ -0.86
PAPD4-203ENST00000428308 ARAP3Q8WWN8 1544 aa9.7□□□□□ -0.86
PAPD4-203ENST00000428308 MLECQ14165 292 aa9.7□□□□□ -0.86
PAPD4-203ENST00000428308 CASKIN1Q8WXD9 1431 aa9.69□□□□□ -0.86
PAPD4-203ENST00000428308 KANK4Q5T7N3 995 aaPredicted RBP9.69□□□□□ -0.86
PAPD4-203ENST00000428308 HS6ST3Q8IZP7 471 aa9.69□□□□□ -0.86
PAPD4-203ENST00000428308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.69□□□□□ -0.86
PAPD4-203ENST00000428308 PTPRMP28827 1452 aa9.68□□□□□ -0.86
PAPD4-203ENST00000428308 CFAP43Q8NDM7 1665 aa9.68□□□□□ -0.86
PAPD4-203ENST00000428308 CDK11BP21127 795 aaKnown RBP9.66□□□□□ -0.86
PAPD4-203ENST00000428308 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
PAPD4-203ENST00000428308 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
PAPD4-203ENST00000428308 FBXO41Q8TF61 875 aa9.65□□□□□ -0.86
PAPD4-203ENST00000428308 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
PAPD4-203ENST00000428308 ZNF777Q9ULD5 760 aaPredicted RBP9.65□□□□□ -0.86
PAPD4-203ENST00000428308 ABCA9Q8IUA7 1624 aa9.65□□□□□ -0.86
PAPD4-203ENST00000428308 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
PAPD4-203ENST00000428308 VPS8Q8N3P4 1428 aa9.64□□□□□ -0.87
PAPD4-203ENST00000428308 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
PAPD4-203ENST00000428308 YEATS2Q9ULM3 1422 aa9.64□□□□□ -0.87
PAPD4-203ENST00000428308 PHLDB1Q86UU1 1377 aa9.64□□□□□ -0.87
PAPD4-203ENST00000428308 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
PAPD4-203ENST00000428308 CEBPAP49715 358 aaPredicted RBP9.64□□□□□ -0.87
PAPD4-203ENST00000428308 ZNF644Q9H582 1327 aaPredicted RBP9.63□□□□□ -0.87
PAPD4-203ENST00000428308 NEO1Q92859 1461 aa9.63□□□□□ -0.87
PAPD4-203ENST00000428308 TROQ12816 1431 aaPredicted RBP9.62□□□□□ -0.87
PAPD4-203ENST00000428308 MKRN4PQ13434 485 aaPredicted RBP9.62□□□□□ -0.87
PAPD4-203ENST00000428308 FRMPD1Q5SYB0 1578 aa9.62□□□□□ -0.87
PAPD4-203ENST00000428308 FANCAO15360 1455 aa9.62□□□□□ -0.87
PAPD4-203ENST00000428308 DENND4BO75064 1496 aaPredicted RBP9.62□□□□□ -0.87
PAPD4-203ENST00000428308 CDC42BPBQ9Y5S2 1711 aa9.62□□□□□ -0.87
PAPD4-203ENST00000428308 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms