RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
PEX1-203ENST00000428214 HFM1A2PYH4 1435 aa16.52■□□□□ 0.23
PEX1-203ENST00000428214 DAPK1P53355 1430 aa16.52■□□□□ 0.23
PEX1-203ENST00000428214 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
PEX1-203ENST00000428214 CDC42BPBQ9Y5S2 1711 aa16.5■□□□□ 0.23
PEX1-203ENST00000428214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.49■□□□□ 0.23
PEX1-203ENST00000428214 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
PEX1-203ENST00000428214 ITSN2Q9NZM3 1697 aa16.48■□□□□ 0.23
PEX1-203ENST00000428214 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
PEX1-203ENST00000428214 KDM5BQ9UGL1 1544 aa16.46■□□□□ 0.23
PEX1-203ENST00000428214 FOXD1Q16676 465 aa16.46■□□□□ 0.23
PEX1-203ENST00000428214 SAMD9LQ8IVG5 1584 aa16.44■□□□□ 0.22
PEX1-203ENST00000428214 DENND4BO75064 1496 aaPredicted RBP16.43■□□□□ 0.22
PEX1-203ENST00000428214 UHRF1BP1LA0JNW5 1464 aa16.43■□□□□ 0.22
PEX1-203ENST00000428214 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
PEX1-203ENST00000428214 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
PEX1-203ENST00000428214 TRIM52Q96A61 297 aa16.41■□□□□ 0.22
PEX1-203ENST00000428214 ARHGAP5Q13017 1502 aa16.4■□□□□ 0.22
PEX1-203ENST00000428214 AKNAQ7Z591 1439 aa16.39■□□□□ 0.21
PEX1-203ENST00000428214 CROCC2H7BZ55 1655 aa16.39■□□□□ 0.21
PEX1-203ENST00000428214 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
PEX1-203ENST00000428214 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
PEX1-203ENST00000428214 ARHGEF12Q9NZN5 1544 aa16.38■□□□□ 0.21
PEX1-203ENST00000428214 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
PEX1-203ENST00000428214 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
PEX1-203ENST00000428214 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
PEX1-203ENST00000428214 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
PEX1-203ENST00000428214 C9orf84Q5VXU9 1444 aa16.34■□□□□ 0.21
PEX1-203ENST00000428214 WDR7Q9Y4E6 1490 aa16.34■□□□□ 0.21
PEX1-203ENST00000428214 CLSPNQ9HAW4 1339 aa16.33■□□□□ 0.2
PEX1-203ENST00000428214 ROCK1Q13464 1354 aa16.32■□□□□ 0.2
PEX1-203ENST00000428214 ADGBQ8N7X0 1667 aa16.31■□□□□ 0.2
PEX1-203ENST00000428214 MPHOSPH9Q99550 1183 aa16.31■□□□□ 0.2
PEX1-203ENST00000428214 RIMBP3CA6NJZ7 1639 aa16.29■□□□□ 0.2
PEX1-203ENST00000428214 RIMBP3BA6NNM3 1639 aa16.29■□□□□ 0.2
PEX1-203ENST00000428214 RIMBP3Q9UFD9 1639 aa16.29■□□□□ 0.2
PEX1-203ENST00000428214 PLCH2O75038 1416 aa16.29■□□□□ 0.2
PEX1-203ENST00000428214 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
PEX1-203ENST00000428214 TRAPPC8Q9Y2L5 1435 aa16.29■□□□□ 0.2
PEX1-203ENST00000428214 ADGRL2O95490 1459 aa16.27■□□□□ 0.2
PEX1-203ENST00000428214 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
PEX1-203ENST00000428214 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
PEX1-203ENST00000428214 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.2
PEX1-203ENST00000428214 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
PEX1-203ENST00000428214 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
PEX1-203ENST00000428214 ANKRD50Q9ULJ7 1429 aa16.26■□□□□ 0.19
PEX1-203ENST00000428214 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
PEX1-203ENST00000428214 ARHGEF5Q12774 1597 aa16.25■□□□□ 0.19
PEX1-203ENST00000428214 PZPP20742 1482 aa16.25■□□□□ 0.19
PEX1-203ENST00000428214 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
PEX1-203ENST00000428214 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
PEX1-203ENST00000428214 ABCC1P33527 1531 aa16.23■□□□□ 0.19
PEX1-203ENST00000428214 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
PEX1-203ENST00000428214 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
PEX1-203ENST00000428214 SHANK2Q9UPX8 1470 aa16.22■□□□□ 0.19
PEX1-203ENST00000428214 ABCA9Q8IUA7 1624 aa16.22■□□□□ 0.19
PEX1-203ENST00000428214 FANCAO15360 1455 aa16.22■□□□□ 0.19
PEX1-203ENST00000428214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
PEX1-203ENST00000428214 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
PEX1-203ENST00000428214 NUP155O75694 1391 aa16.18■□□□□ 0.18
PEX1-203ENST00000428214 PLEKHH2Q8IVE3 1493 aa16.18■□□□□ 0.18
PEX1-203ENST00000428214 PKD2Q13563 968 aa16.17■□□□□ 0.18
PEX1-203ENST00000428214 KIAA1107Q9UPP5 1409 aa16.17■□□□□ 0.18
PEX1-203ENST00000428214 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
PEX1-203ENST00000428214 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
PEX1-203ENST00000428214 PPP1R15AO75807 674 aaPredicted RBP16.15■□□□□ 0.18
PEX1-203ENST00000428214 SCAPERQ9BY12 1400 aa16.15■□□□□ 0.18
PEX1-203ENST00000428214 ADGRL1O94910 1474 aa16.14■□□□□ 0.17
PEX1-203ENST00000428214 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
PEX1-203ENST00000428214 L3MBTL2Q969R5 705 aa16.12■□□□□ 0.17
PEX1-203ENST00000428214 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
PEX1-203ENST00000428214 SPAG9O60271 1321 aaKnown RBP16.12■□□□□ 0.17
PEX1-203ENST00000428214 ZFYVE16Q7Z3T8 1539 aa16.11■□□□□ 0.17
PEX1-203ENST00000428214 MAST1Q9Y2H9 1570 aa16.11■□□□□ 0.17
PEX1-203ENST00000428214 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
PEX1-203ENST00000428214 RSPH4AQ5TD94 716 aa16.09■□□□□ 0.17
PEX1-203ENST00000428214 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
PEX1-203ENST00000428214 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
PEX1-203ENST00000428214 TSPOAP1O95153 1857 aa16.08■□□□□ 0.16
PEX1-203ENST00000428214 FAM135AQ9P2D6 1515 aa16.08■□□□□ 0.16
PEX1-203ENST00000428214 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
PEX1-203ENST00000428214 RPRD2Q5VT52 1461 aaKnown RBP16.06■□□□□ 0.16
PEX1-203ENST00000428214 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
PEX1-203ENST00000428214 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
PEX1-203ENST00000428214 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
PEX1-203ENST00000428214 KIDINS220Q9ULH0 1771 aa16.04■□□□□ 0.16
PEX1-203ENST00000428214 TEX14Q8IWB6 1497 aa16.04■□□□□ 0.16
PEX1-203ENST00000428214 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
PEX1-203ENST00000428214 MIER1Q8N108 512 aa16.03■□□□□ 0.16
PEX1-203ENST00000428214 KDM5DQ9BY66 1539 aa16.02■□□□□ 0.16
PEX1-203ENST00000428214 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.15
PEX1-203ENST00000428214 UNC13BO14795 1591 aa16.02■□□□□ 0.15
PEX1-203ENST00000428214 PLA2R1Q13018 1463 aa16.01■□□□□ 0.15
PEX1-203ENST00000428214 KIF3BO15066 747 aa16■□□□□ 0.15
PEX1-203ENST00000428214 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
PEX1-203ENST00000428214 DIP2BQ9P265 1576 aa16■□□□□ 0.15
PEX1-203ENST00000428214 POGZQ7Z3K3 1410 aa15.99■□□□□ 0.15
PEX1-203ENST00000428214 TIMELESSQ9UNS1 1208 aa15.99■□□□□ 0.15
PEX1-203ENST00000428214 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
PEX1-203ENST00000428214 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms