RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 DNMT1P26358 1616 aaKnown RBP33.78■■■■□ 3
FAAP20-209ENST00000428120 CAMSAP2Q08AD1 1489 aa33.77■■■■□ 3
FAAP20-209ENST00000428120 AKNAQ7Z591 1439 aa33.75■■■□□ 2.99
FAAP20-209ENST00000428120 KDM6BO15054 1643 aa33.75■■■□□ 2.99
FAAP20-209ENST00000428120 ABCC10Q5T3U5 1492 aa33.72■■■□□ 2.99
FAAP20-209ENST00000428120 CDC42BPAQ5VT25 1732 aa33.69■■■□□ 2.98
FAAP20-209ENST00000428120 TRIM52Q96A61 297 aa33.67■■■□□ 2.98
FAAP20-209ENST00000428120 ABCC2Q92887 1545 aa33.65■■■□□ 2.98
FAAP20-209ENST00000428120 ROCK1Q13464 1354 aa33.65■■■□□ 2.98
FAAP20-209ENST00000428120 DENND4BO75064 1496 aaPredicted RBP33.53■■■□□ 2.96
FAAP20-209ENST00000428120 CROCC2H7BZ55 1655 aa33.51■■■□□ 2.96
FAAP20-209ENST00000428120 NCOA1Q15788 1441 aa33.51■■■□□ 2.95
FAAP20-209ENST00000428120 TIMELESSQ9UNS1 1208 aa33.51■■■□□ 2.95
FAAP20-209ENST00000428120 MPHOSPH9Q99550 1183 aa33.49■■■□□ 2.95
FAAP20-209ENST00000428120 ADGBQ8N7X0 1667 aa33.48■■■□□ 2.95
FAAP20-209ENST00000428120 KCNH8Q96L42 1107 aa33.48■■■□□ 2.95
FAAP20-209ENST00000428120 TTC37Q6PGP7 1564 aa33.47■■■□□ 2.95
FAAP20-209ENST00000428120 TONSLQ96HA7 1378 aa33.46■■■□□ 2.95
FAAP20-209ENST00000428120 HNRNPMP52272 730 aaKnown RBP eCLIP33.46■■■□□ 2.95
FAAP20-209ENST00000428120 CDC42BPBQ9Y5S2 1711 aa33.46■■■□□ 2.95
FAAP20-209ENST00000428120 ZCCHC11Q5TAX3 1644 aaKnown RBP33.45■■■□□ 2.95
FAAP20-209ENST00000428120 PREX2Q70Z35 1606 aa33.45■■■□□ 2.94
FAAP20-209ENST00000428120 FOXD1Q16676 465 aa33.44■■■□□ 2.94
FAAP20-209ENST00000428120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.44■■■□□ 2.945e-8■■■□□ 16
FAAP20-209ENST00000428120 UHRF1BP1LA0JNW5 1464 aa33.43■■■□□ 2.94
FAAP20-209ENST00000428120 ADGRL2O95490 1459 aa33.43■■■□□ 2.94
FAAP20-209ENST00000428120 PPP1R15AO75807 674 aaPredicted RBP33.42■■■□□ 2.94
FAAP20-209ENST00000428120 ANKRD30AQ9BXX3 1397 aa33.41■■■□□ 2.94
FAAP20-209ENST00000428120 SAMD9LQ8IVG5 1584 aa33.4■■■□□ 2.94
FAAP20-209ENST00000428120 C9orf84Q5VXU9 1444 aa33.39■■■□□ 2.94
FAAP20-209ENST00000428120 KDM5BQ9UGL1 1544 aa33.39■■■□□ 2.94
FAAP20-209ENST00000428120 ARHGAP5Q13017 1502 aa33.36■■■□□ 2.93
FAAP20-209ENST00000428120 TSPY4P0CV99 314 aa33.36■■■□□ 2.93
FAAP20-209ENST00000428120 TSPY10P0CW01 314 aa33.36■■■□□ 2.93
FAAP20-209ENST00000428120 MBD5Q9P267 1494 aa33.35■■■□□ 2.93
FAAP20-209ENST00000428120 SHANK2Q9UPX8 1470 aa33.35■■■□□ 2.93
FAAP20-209ENST00000428120 MIER1Q8N108 512 aa33.34■■■□□ 2.93
FAAP20-209ENST00000428120 OSCARQ8IYS5 282 aa33.33■■■□□ 2.93
FAAP20-209ENST00000428120 SLC4A1APQ9BWU0 796 aaKnown RBP33.33■■■□□ 2.93
FAAP20-209ENST00000428120 ARHGEF5Q12774 1597 aa33.31■■■□□ 2.92
FAAP20-209ENST00000428120 ANKRD50Q9ULJ7 1429 aa33.3■■■□□ 2.92
FAAP20-209ENST00000428120 MYO5CQ9NQX4 1742 aa33.29■■■□□ 2.92
FAAP20-209ENST00000428120 ACIN1Q9UKV3 1341 aaKnown RBP33.29■■■□□ 2.92
FAAP20-209ENST00000428120 SYCP2Q9BX26 1530 aa33.28■■■□□ 2.92
FAAP20-209ENST00000428120 CCDC141Q6ZP82 1450 aa33.27■■■□□ 2.92
FAAP20-209ENST00000428120 PZPP20742 1482 aa33.25■■■□□ 2.91
FAAP20-209ENST00000428120 KIF15Q9NS87 1388 aa33.23■■■□□ 2.91
FAAP20-209ENST00000428120 ANKRD30BQ9BXX2 1392 aa33.22■■■□□ 2.91
FAAP20-209ENST00000428120 HIRIP3Q9BW71 556 aaPredicted RBP33.19■■■□□ 2.9
FAAP20-209ENST00000428120 PLCH2O75038 1416 aa33.18■■■□□ 2.9
FAAP20-209ENST00000428120 RSPH4AQ5TD94 716 aa33.18■■■□□ 2.9
FAAP20-209ENST00000428120 NUP155O75694 1391 aa33.12■■■□□ 2.89
FAAP20-209ENST00000428120 ARHGEF12Q9NZN5 1544 aa33.12■■■□□ 2.89
FAAP20-209ENST00000428120 WDR7Q9Y4E6 1490 aa33.12■■■□□ 2.89
FAAP20-209ENST00000428120 EFCAB2Q5VUJ9 269 aa33.11■■■□□ 2.89
FAAP20-209ENST00000428120 PKD2Q13563 968 aa33.11■■■□□ 2.89
FAAP20-209ENST00000428120 L3MBTL2Q969R5 705 aa33.11■■■□□ 2.89
FAAP20-209ENST00000428120 KIAA1107Q9UPP5 1409 aa33.11■■■□□ 2.89
FAAP20-209ENST00000428120 RPRD2Q5VT52 1461 aaKnown RBP33.1■■■□□ 2.89
FAAP20-209ENST00000428120 PLEKHH2Q8IVE3 1493 aa33.1■■■□□ 2.89
FAAP20-209ENST00000428120 MAST1Q9Y2H9 1570 aa33.03■■■□□ 2.88
FAAP20-209ENST00000428120 ASXL2Q76L83 1435 aa33.01■■■□□ 2.88
FAAP20-209ENST00000428120 ABCC1P33527 1531 aa33.01■■■□□ 2.88
FAAP20-209ENST00000428120 YTHDC1Q96MU7 727 aaKnown RBP33■■■□□ 2.87
FAAP20-209ENST00000428120 TEX14Q8IWB6 1497 aa32.98■■■□□ 2.87
FAAP20-209ENST00000428120 TRAPPC8Q9Y2L5 1435 aa32.98■■■□□ 2.87
FAAP20-209ENST00000428120 KDM5DQ9BY66 1539 aa32.97■■■□□ 2.87
FAAP20-209ENST00000428120 DDX10Q13206 875 aaKnown RBP32.96■■■□□ 2.87
FAAP20-209ENST00000428120 PLXNC1O60486 1568 aa32.94■■■□□ 2.86
FAAP20-209ENST00000428120 NPM1P06748 294 aaKnown RBP eCLIP32.93■■■□□ 2.86
FAAP20-209ENST00000428120 ABCA9Q8IUA7 1624 aa32.92■■■□□ 2.86
FAAP20-209ENST00000428120 ARAP3Q8WWN8 1544 aa32.91■■■□□ 2.86
FAAP20-209ENST00000428120 AFAP1Q8N556 730 aa32.91■■■□□ 2.86
FAAP20-209ENST00000428120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.9■■■□□ 2.86
FAAP20-209ENST00000428120 FANCAO15360 1455 aa32.89■■■□□ 2.86
FAAP20-209ENST00000428120 NBPF8Q3BBV2 869 aa32.89■■■□□ 2.86
FAAP20-209ENST00000428120 FAM135AQ9P2D6 1515 aa32.88■■■□□ 2.85
FAAP20-209ENST00000428120 DUOX2Q9NRD8 1548 aa32.85■■■□□ 2.85
FAAP20-209ENST00000428120 SPAG9O60271 1321 aaKnown RBP32.84■■■□□ 2.85
FAAP20-209ENST00000428120 CENPBP07199 599 aaPredicted RBP32.84■■■□□ 2.85
FAAP20-209ENST00000428120 HSPA5P11021 654 aaKnown RBP32.82■■■□□ 2.84
FAAP20-209ENST00000428120 UNC13BO14795 1591 aa32.81■■■□□ 2.84
FAAP20-209ENST00000428120 ERBINQ96RT1 1412 aa32.78■■■□□ 2.84
FAAP20-209ENST00000428120 ADGRL1O94910 1474 aa32.77■■■□□ 2.84
FAAP20-209ENST00000428120 EIF4G2P78344 907 aaKnown RBP eCLIP32.77■■■□□ 2.84
FAAP20-209ENST00000428120 ZFYVE16Q7Z3T8 1539 aa32.76■■■□□ 2.83
FAAP20-209ENST00000428120 ZNF326Q5BKZ1 582 aaKnown RBP32.75■■■□□ 2.83
FAAP20-209ENST00000428120 SCAPERQ9BY12 1400 aa32.75■■■□□ 2.83
FAAP20-209ENST00000428120 RTEL1-TNFRSF6BF6WH68 1400 aa32.71■■■□□ 2.83
FAAP20-209ENST00000428120 MYT1LQ9UL68 1186 aa32.71■■■□□ 2.83
FAAP20-209ENST00000428120 IQGAP3Q86VI3 1631 aa32.7■■■□□ 2.82
FAAP20-209ENST00000428120 MAGI2Q86UL8 1455 aa32.67■■■□□ 2.82
FAAP20-209ENST00000428120 ATP7AQ04656 1500 aa32.66■■■□□ 2.82
FAAP20-209ENST00000428120 CD109Q6YHK3 1445 aa32.65■■■□□ 2.82
FAAP20-209ENST00000428120 CYB5RLQ6IPT4 315 aa32.64■■■□□ 2.82
FAAP20-209ENST00000428120 INO80Q9ULG1 1556 aaPredicted RBP32.64■■■□□ 2.82
FAAP20-209ENST00000428120 SCAF1Q9H7N4 1312 aaKnown RBP32.64■■■□□ 2.82
FAAP20-209ENST00000428120 WASHC2AQ641Q2 1341 aa32.63■■■□□ 2.81
FAAP20-209ENST00000428120 PLA2R1Q13018 1463 aa32.62■■■□□ 2.81
FAAP20-209ENST00000428120 CCDC144AA2RUR9 1427 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 443 ms