RNA–Protein interactions for RNA: ENST00000428007.1

PAICSP3-201, Transcript of phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3, humanhuman

BASIC

Gene PAICSP3, Length 1,168 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICSP3-201ENST00000428007 MAP3K4Q9Y6R4 1608 aa14.04□□□□□ -0.16
PAICSP3-201ENST00000428007 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
PAICSP3-201ENST00000428007 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
PAICSP3-201ENST00000428007 NEO1Q92859 1461 aa14.01□□□□□ -0.17
PAICSP3-201ENST00000428007 VPS8Q8N3P4 1428 aa14.01□□□□□ -0.17
PAICSP3-201ENST00000428007 APLP2Q06481 763 aa14.01□□□□□ -0.17
PAICSP3-201ENST00000428007 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
PAICSP3-201ENST00000428007 EFCAB2Q5VUJ9 269 aa13.99□□□□□ -0.17
PAICSP3-201ENST00000428007 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
PAICSP3-201ENST00000428007 CDK13Q14004 1512 aaKnown RBP13.98□□□□□ -0.17
PAICSP3-201ENST00000428007 MTUS2Q5JR59 1369 aa13.97□□□□□ -0.17
PAICSP3-201ENST00000428007 PCF11O94913 1555 aaKnown RBP13.97□□□□□ -0.17
PAICSP3-201ENST00000428007 PLCH2O75038 1416 aa13.97□□□□□ -0.17
PAICSP3-201ENST00000428007 KIF14Q15058 1648 aa13.96□□□□□ -0.17
PAICSP3-201ENST00000428007 CFAP74Q9C0B2 1584 aa13.96□□□□□ -0.18
PAICSP3-201ENST00000428007 KDM6BO15054 1643 aa13.94□□□□□ -0.18
PAICSP3-201ENST00000428007 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
PAICSP3-201ENST00000428007 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
PAICSP3-201ENST00000428007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
PAICSP3-201ENST00000428007 FANCAO15360 1455 aa13.93□□□□□ -0.18
PAICSP3-201ENST00000428007 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
PAICSP3-201ENST00000428007 AKNAQ7Z591 1439 aa13.9□□□□□ -0.18
PAICSP3-201ENST00000428007 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
PAICSP3-201ENST00000428007 PPRC1Q5VV67 1664 aaKnown RBP13.9□□□□□ -0.18
PAICSP3-201ENST00000428007 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.19
PAICSP3-201ENST00000428007 PLEKHH2Q8IVE3 1493 aa13.88□□□□□ -0.19
PAICSP3-201ENST00000428007 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
PAICSP3-201ENST00000428007 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
PAICSP3-201ENST00000428007 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
PAICSP3-201ENST00000428007 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
PAICSP3-201ENST00000428007 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
PAICSP3-201ENST00000428007 TIAM1Q13009 1591 aa13.84□□□□□ -0.19
PAICSP3-201ENST00000428007 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
PAICSP3-201ENST00000428007 ADGRL1O94910 1474 aa13.84□□□□□ -0.19
PAICSP3-201ENST00000428007 LRRC9Q6ZRR7 1453 aa13.84□□□□□ -0.19
PAICSP3-201ENST00000428007 ARHGAP5Q13017 1502 aa13.84□□□□□ -0.19
PAICSP3-201ENST00000428007 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.19
PAICSP3-201ENST00000428007 LRRIQ1Q96JM4 1722 aa13.83□□□□□ -0.2
PAICSP3-201ENST00000428007 SCAPERQ9BY12 1400 aa13.82□□□□□ -0.2
PAICSP3-201ENST00000428007 ZNF518AQ6AHZ1 1483 aa13.82□□□□□ -0.2
PAICSP3-201ENST00000428007 GPATCH8Q9UKJ3 1502 aaKnown RBP13.82□□□□□ -0.2
PAICSP3-201ENST00000428007 COL17A1Q9UMD9 1497 aaPredicted RBP13.81□□□□□ -0.2
PAICSP3-201ENST00000428007 SUPT6HQ7KZ85 1726 aaKnown RBP13.8□□□□□ -0.2
PAICSP3-201ENST00000428007 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
PAICSP3-201ENST00000428007 POGZQ7Z3K3 1410 aa13.79□□□□□ -0.2
PAICSP3-201ENST00000428007 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
PAICSP3-201ENST00000428007 RAPGEF3O95398 923 aa13.78□□□□□ -0.2
PAICSP3-201ENST00000428007 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
PAICSP3-201ENST00000428007 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
PAICSP3-201ENST00000428007 ZMYM4Q5VZL5 1548 aa13.77□□□□□ -0.21
PAICSP3-201ENST00000428007 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
PAICSP3-201ENST00000428007 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
PAICSP3-201ENST00000428007 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
PAICSP3-201ENST00000428007 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
PAICSP3-201ENST00000428007 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
PAICSP3-201ENST00000428007 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
PAICSP3-201ENST00000428007 CDC42BPAQ5VT25 1732 aa13.73□□□□□ -0.21
PAICSP3-201ENST00000428007 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
PAICSP3-201ENST00000428007 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
PAICSP3-201ENST00000428007 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
PAICSP3-201ENST00000428007 ABCC1P33527 1531 aa13.72□□□□□ -0.21
PAICSP3-201ENST00000428007 RTEL1-TNFRSF6BF6WH68 1400 aa13.72□□□□□ -0.21
PAICSP3-201ENST00000428007 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
PAICSP3-201ENST00000428007 KDM5CP41229 1560 aa13.71□□□□□ -0.21
PAICSP3-201ENST00000428007 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
PAICSP3-201ENST00000428007 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
PAICSP3-201ENST00000428007 AFAP1Q8N556 730 aa13.71□□□□□ -0.21
PAICSP3-201ENST00000428007 ATP10AO60312 1499 aa13.7□□□□□ -0.22
PAICSP3-201ENST00000428007 ZFYVE16Q7Z3T8 1539 aa13.69□□□□□ -0.22
PAICSP3-201ENST00000428007 C9orf84Q5VXU9 1444 aa13.68□□□□□ -0.22
PAICSP3-201ENST00000428007 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.22
PAICSP3-201ENST00000428007 FRMPD1Q5SYB0 1578 aa13.67□□□□□ -0.22
PAICSP3-201ENST00000428007 ARHGEF40Q8TER5 1519 aa13.67□□□□□ -0.22
PAICSP3-201ENST00000428007 ARID4BQ4LE39 1312 aaPredicted RBP13.66□□□□□ -0.22
PAICSP3-201ENST00000428007 TRAPPC8Q9Y2L5 1435 aa13.66□□□□□ -0.22
PAICSP3-201ENST00000428007 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
PAICSP3-201ENST00000428007 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
PAICSP3-201ENST00000428007 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
PAICSP3-201ENST00000428007 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
PAICSP3-201ENST00000428007 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
PAICSP3-201ENST00000428007 ARHGEF5Q12774 1597 aa13.65□□□□□ -0.22
PAICSP3-201ENST00000428007 CAMSAP2Q08AD1 1489 aa13.64□□□□□ -0.23
PAICSP3-201ENST00000428007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.64□□□□□ -0.23
PAICSP3-201ENST00000428007 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
PAICSP3-201ENST00000428007 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
PAICSP3-201ENST00000428007 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
PAICSP3-201ENST00000428007 AGLP35573 1532 aa13.62□□□□□ -0.23
PAICSP3-201ENST00000428007 ESF1Q9H501 851 aaKnown RBP13.61□□□□□ -0.23
PAICSP3-201ENST00000428007 YEATS2Q9ULM3 1422 aa13.61□□□□□ -0.23
PAICSP3-201ENST00000428007 ZNF644Q9H582 1327 aaPredicted RBP13.61□□□□□ -0.23
PAICSP3-201ENST00000428007 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
PAICSP3-201ENST00000428007 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
PAICSP3-201ENST00000428007 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
PAICSP3-201ENST00000428007 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.23
PAICSP3-201ENST00000428007 SHANK2Q9UPX8 1470 aa13.58□□□□□ -0.24
PAICSP3-201ENST00000428007 CNTLNQ9NXG0 1405 aa13.57□□□□□ -0.24
PAICSP3-201ENST00000428007 A2MP01023 1474 aa13.57□□□□□ -0.24
PAICSP3-201ENST00000428007 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
PAICSP3-201ENST00000428007 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
PAICSP3-201ENST00000428007 MAST1Q9Y2H9 1570 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms