RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 OSCARQ8IYS5 282 aa39.21■■■■□ 3.87
SH3GL3-202ENST00000427482 ABCC5O15440 1437 aa39.2■■■■□ 3.87
SH3GL3-202ENST00000427482 KDM5BQ9UGL1 1544 aa39.2■■■■□ 3.87
SH3GL3-202ENST00000427482 CROCC2H7BZ55 1655 aa39.15■■■■□ 3.86
SH3GL3-202ENST00000427482 PREX2Q70Z35 1606 aa39.14■■■■□ 3.86
SH3GL3-202ENST00000427482 CHIC2Q9UKJ5 165 aa39.13■■■■□ 3.85
SH3GL3-202ENST00000427482 ROCK1Q13464 1354 aa39.12■■■■□ 3.85
SH3GL3-202ENST00000427482 CDC42BPBQ9Y5S2 1711 aa39.11■■■■□ 3.85
SH3GL3-202ENST00000427482 ADGBQ8N7X0 1667 aa39.09■■■■□ 3.85
SH3GL3-202ENST00000427482 RRP7BPQ9NSQ0 103 aa39.09■■■■□ 3.85
SH3GL3-202ENST00000427482 TTC37Q6PGP7 1564 aa39.09■■■■□ 3.85
SH3GL3-202ENST00000427482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.07■■■■□ 3.851e-7■■□□□ 13.4
SH3GL3-202ENST00000427482 ZNF777Q9ULD5 760 aaPredicted RBP39.04■■■■□ 3.84
SH3GL3-202ENST00000427482 KDM6BO15054 1643 aa39.03■■■■□ 3.84
SH3GL3-202ENST00000427482 MYO5CQ9NQX4 1742 aa39.02■■■■□ 3.84
SH3GL3-202ENST00000427482 SAMD9LQ8IVG5 1584 aa38.97■■■■□ 3.83
SH3GL3-202ENST00000427482 ADGRL2O95490 1459 aa38.96■■■■□ 3.83
SH3GL3-202ENST00000427482 ARHGEF5Q12774 1597 aa38.95■■■■□ 3.83
SH3GL3-202ENST00000427482 SHANK2Q9UPX8 1470 aa38.93■■■■□ 3.82
SH3GL3-202ENST00000427482 ARHGAP5Q13017 1502 aa38.88■■■■□ 3.82
SH3GL3-202ENST00000427482 NCOA1Q15788 1441 aa38.88■■■■□ 3.81
SH3GL3-202ENST00000427482 MBD5Q9P267 1494 aa38.86■■■■□ 3.81
SH3GL3-202ENST00000427482 ACIN1Q9UKV3 1341 aaKnown RBP38.83■■■■□ 3.81
SH3GL3-202ENST00000427482 KCNH8Q96L42 1107 aa38.83■■■■□ 3.81
SH3GL3-202ENST00000427482 WDR7Q9Y4E6 1490 aa38.82■■■■□ 3.8
SH3GL3-202ENST00000427482 C9orf84Q5VXU9 1444 aa38.8■■■■□ 3.8
SH3GL3-202ENST00000427482 ANKRD30AQ9BXX3 1397 aa38.8■■■■□ 3.8
SH3GL3-202ENST00000427482 CCDC141Q6ZP82 1450 aa38.78■■■■□ 3.8
SH3GL3-202ENST00000427482 PLCH2O75038 1416 aa38.77■■■■□ 3.8
SH3GL3-202ENST00000427482 SYCP2Q9BX26 1530 aa38.76■■■■□ 3.8
SH3GL3-202ENST00000427482 PLEKHH2Q8IVE3 1493 aa38.75■■■■□ 3.79
SH3GL3-202ENST00000427482 SIN3AQ96ST3 1273 aa38.75■■■■□ 3.79
SH3GL3-202ENST00000427482 HNRNPMP52272 730 aaKnown RBP eCLIP38.74■■■■□ 3.794e-6■■■■□ 24.7
SH3GL3-202ENST00000427482 DENND4BO75064 1496 aaPredicted RBP38.73■■■■□ 3.79
SH3GL3-202ENST00000427482 TRIM52Q96A61 297 aa38.73■■■■□ 3.79
SH3GL3-202ENST00000427482 ARAP3Q8WWN8 1544 aa38.71■■■■□ 3.79
SH3GL3-202ENST00000427482 KIAA1107Q9UPP5 1409 aa38.71■■■■□ 3.79
SH3GL3-202ENST00000427482 ZNF316A6NFI3 1004 aaPredicted RBP38.7■■■■□ 3.79
SH3GL3-202ENST00000427482 RSPH4AQ5TD94 716 aa38.7■■■■□ 3.79
SH3GL3-202ENST00000427482 MAST1Q9Y2H9 1570 aa38.69■■■■□ 3.78
SH3GL3-202ENST00000427482 ABCA9Q8IUA7 1624 aa38.68■■■■□ 3.78
SH3GL3-202ENST00000427482 TSPY4P0CV99 314 aa38.68■■■■□ 3.78
SH3GL3-202ENST00000427482 TSPY10P0CW01 314 aa38.68■■■■□ 3.78
SH3GL3-202ENST00000427482 TIMELESSQ9UNS1 1208 aa38.67■■■■□ 3.78
SH3GL3-202ENST00000427482 ASXL2Q76L83 1435 aa38.66■■■■□ 3.78
SH3GL3-202ENST00000427482 NEUROD1Q13562 356 aa38.66■■■■□ 3.78
SH3GL3-202ENST00000427482 ABCC1P33527 1531 aa38.62■■■■□ 3.77
SH3GL3-202ENST00000427482 MPHOSPH9Q99550 1183 aa38.62■■■■□ 3.77
SH3GL3-202ENST00000427482 ANKRD50Q9ULJ7 1429 aa38.62■■■■□ 3.77
SH3GL3-202ENST00000427482 EFCAB2Q5VUJ9 269 aa38.59■■■■□ 3.77
SH3GL3-202ENST00000427482 ARHGEF12Q9NZN5 1544 aa38.59■■■■□ 3.77
SH3GL3-202ENST00000427482 KIF15Q9NS87 1388 aa38.56■■■■□ 3.76
SH3GL3-202ENST00000427482 NPM1P06748 294 aaKnown RBP eCLIP38.54■■■■□ 3.76
SH3GL3-202ENST00000427482 PZPP20742 1482 aa38.53■■■■□ 3.76
SH3GL3-202ENST00000427482 PLXNC1O60486 1568 aa38.53■■■■□ 3.76
SH3GL3-202ENST00000427482 TONSLQ96HA7 1378 aa38.46■■■■□ 3.75
SH3GL3-202ENST00000427482 KDM5DQ9BY66 1539 aa38.45■■■■□ 3.75
SH3GL3-202ENST00000427482 RIMBP3CA6NJZ7 1639 aa38.44■■■■□ 3.74
SH3GL3-202ENST00000427482 RIMBP3BA6NNM3 1639 aa38.44■■■■□ 3.74
SH3GL3-202ENST00000427482 RIMBP3Q9UFD9 1639 aa38.44■■■■□ 3.74
SH3GL3-202ENST00000427482 FANCAO15360 1455 aa38.43■■■■□ 3.74
SH3GL3-202ENST00000427482 SLC4A1APQ9BWU0 796 aaKnown RBP38.42■■■■□ 3.74
SH3GL3-202ENST00000427482 DIEXFQ68CQ4 756 aaKnown RBP38.4■■■■□ 3.74
SH3GL3-202ENST00000427482 TRAPPC8Q9Y2L5 1435 aa38.4■■■■□ 3.74
SH3GL3-202ENST00000427482 ANKRD30BQ9BXX2 1392 aa38.4■■■■□ 3.74
SH3GL3-202ENST00000427482 PPP1R15AO75807 674 aaPredicted RBP38.38■■■■□ 3.73
SH3GL3-202ENST00000427482 FOXD1Q16676 465 aa38.35■■■■□ 3.73
SH3GL3-202ENST00000427482 DUOX2Q9NRD8 1548 aa38.33■■■■□ 3.73
SH3GL3-202ENST00000427482 UNC13BO14795 1591 aa38.31■■■■□ 3.72
SH3GL3-202ENST00000427482 NUP155O75694 1391 aa38.31■■■■□ 3.72
SH3GL3-202ENST00000427482 ZFYVE16Q7Z3T8 1539 aa38.28■■■■□ 3.72
SH3GL3-202ENST00000427482 RPRD2Q5VT52 1461 aaKnown RBP38.28■■■■□ 3.72
SH3GL3-202ENST00000427482 RTEL1-TNFRSF6BF6WH68 1400 aa38.27■■■■□ 3.72
SH3GL3-202ENST00000427482 CFAP74Q9C0B2 1584 aa38.27■■■■□ 3.72
SH3GL3-202ENST00000427482 ADGRL1O94910 1474 aa38.27■■■■□ 3.72
SH3GL3-202ENST00000427482 INO80Q9ULG1 1556 aaPredicted RBP38.24■■■■□ 3.71
SH3GL3-202ENST00000427482 ERBINQ96RT1 1412 aa38.24■■■■□ 3.71
SH3GL3-202ENST00000427482 CD109Q6YHK3 1445 aa38.21■■■■□ 3.71
SH3GL3-202ENST00000427482 SPAG9O60271 1321 aaKnown RBP38.2■■■■□ 3.71
SH3GL3-202ENST00000427482 PKD2Q13563 968 aa38.2■■■■□ 3.71
SH3GL3-202ENST00000427482 CYB5RLQ6IPT4 315 aa38.2■■■■□ 3.71
SH3GL3-202ENST00000427482 SCAPERQ9BY12 1400 aa38.2■■■■□ 3.71
SH3GL3-202ENST00000427482 FAM135AQ9P2D6 1515 aa38.19■■■■□ 3.7
SH3GL3-202ENST00000427482 AFAP1Q8N556 730 aa38.18■■■■□ 3.7
SH3GL3-202ENST00000427482 ATP7AQ04656 1500 aa38.17■■■■□ 3.7
SH3GL3-202ENST00000427482 IQGAP3Q86VI3 1631 aa38.16■■■■□ 3.7
SH3GL3-202ENST00000427482 MAGI2Q86UL8 1455 aa38.15■■■■□ 3.7
SH3GL3-202ENST00000427482 TEX14Q8IWB6 1497 aa38.13■■■■□ 3.69
SH3GL3-202ENST00000427482 MAP3K4Q9Y6R4 1608 aa38.07■■■■□ 3.69
SH3GL3-202ENST00000427482 L3MBTL2Q969R5 705 aa38.05■■■■□ 3.68
SH3GL3-202ENST00000427482 ZNF518AQ6AHZ1 1483 aa38.05■■■■□ 3.68
SH3GL3-202ENST00000427482 GLI2P10070 1586 aa38.05■■■■□ 3.68
SH3GL3-202ENST00000427482 KIDINS220Q9ULH0 1771 aa38.03■■■■□ 3.68
SH3GL3-202ENST00000427482 NEO1Q92859 1461 aa38.02■■■■□ 3.68
SH3GL3-202ENST00000427482 KDM5CP41229 1560 aa38.01■■■■□ 3.67
SH3GL3-202ENST00000427482 DEPDC5O75140 1603 aa38■■■■□ 3.67
SH3GL3-202ENST00000427482 POGZQ7Z3K3 1410 aa37.99■■■■□ 3.67
SH3GL3-202ENST00000427482 EIF2AK4Q9P2K8 1649 aaKnown RBP37.98■■■■□ 3.67
SH3GL3-202ENST00000427482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.95■■■■□ 3.67
SH3GL3-202ENST00000427482 DIP2BQ9P265 1576 aa37.92■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms