RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 EFCAB2Q5VUJ9 269 aa25.43■■□□□ 1.66
HCG18-235ENST00000426882 GGT6Q6P531 493 aa25.43■■□□□ 1.66
HCG18-235ENST00000426882 SRPK2P78362 688 aaKnown RBP25.42■■□□□ 1.66
HCG18-235ENST00000426882 RCAN3Q9UKA8 241 aa25.42■■□□□ 1.66
HCG18-235ENST00000426882 SAFB2Q14151 953 aaKnown RBP eCLIP25.42■■□□□ 1.661e-6■■■□□ 15.2
HCG18-235ENST00000426882 CCDC18Q5T9S5 1454 aa25.41■■□□□ 1.66
HCG18-235ENST00000426882 HNRNPMP52272 730 aaKnown RBP eCLIP25.41■■□□□ 1.662e-7■□□□□ 10.1
HCG18-235ENST00000426882 TSHZ2Q9NRE2 1034 aa25.39■■□□□ 1.66
HCG18-235ENST00000426882 TRIM44Q96DX7 344 aaPredicted RBP25.38■■□□□ 1.65
HCG18-235ENST00000426882 CASC1Q6TDU7 716 aa25.38■■□□□ 1.65
HCG18-235ENST00000426882 PNNQ9H307 717 aaKnown RBP25.38■■□□□ 1.65
HCG18-235ENST00000426882 NCLP19338 710 aaKnown RBP25.37■■□□□ 1.65
HCG18-235ENST00000426882 CHMP4BQ9H444 224 aaKnown RBP25.37■■□□□ 1.65
HCG18-235ENST00000426882 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
HCG18-235ENST00000426882 A0A0G2JS52 829 aa25.32■■□□□ 1.64
HCG18-235ENST00000426882 IGF1RP08069 1367 aa25.32■■□□□ 1.64
HCG18-235ENST00000426882 JPH4Q96JJ6 628 aa25.31■■□□□ 1.64
HCG18-235ENST00000426882 GLIPR1L2Q4G1C9 344 aa25.31■■□□□ 1.64
HCG18-235ENST00000426882 STK26Q9P289 416 aa25.3■■□□□ 1.64
HCG18-235ENST00000426882 NLRP13Q86W25 1043 aa25.29■■□□□ 1.64
HCG18-235ENST00000426882 MLECQ14165 292 aa25.29■■□□□ 1.64
HCG18-235ENST00000426882 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
HCG18-235ENST00000426882 KIF3BO15066 747 aa25.26■■□□□ 1.63
HCG18-235ENST00000426882 U2AF1L5P0DN76 240 aaPredicted RBP25.24■■□□□ 1.63
HCG18-235ENST00000426882 U2AF1Q01081 240 aaKnown RBP eCLIP25.24■■□□□ 1.63
HCG18-235ENST00000426882 LMOD2Q6P5Q4 547 aa25.24■■□□□ 1.63
HCG18-235ENST00000426882 ST20-MTHFSA0A0A6YYL1 179 aa25.24■■□□□ 1.63
HCG18-235ENST00000426882 TCERG1O14776 1098 aaKnown RBP25.23■■□□□ 1.63
HCG18-235ENST00000426882 HSP90AB1P08238 724 aaKnown RBP25.22■■□□□ 1.63
HCG18-235ENST00000426882 SOX12O15370 315 aa25.22■■□□□ 1.63
HCG18-235ENST00000426882 PRKRIP1Q9H875 184 aaPredicted RBP25.22■■□□□ 1.63
HCG18-235ENST00000426882 FGD5Q6ZNL6 1462 aa25.22■■□□□ 1.63
HCG18-235ENST00000426882 KIF21BO75037 1637 aa25.21■■□□□ 1.63
HCG18-235ENST00000426882 SPAG9O60271 1321 aaKnown RBP25.19■■□□□ 1.62
HCG18-235ENST00000426882 HDGFL2Q7Z4V5 671 aaPredicted RBP25.19■■□□□ 1.62
HCG18-235ENST00000426882 HDGFP51858 240 aaKnown RBP25.19■■□□□ 1.62
HCG18-235ENST00000426882 RTN4Q9NQC3 1192 aaKnown RBP25.18■■□□□ 1.62
HCG18-235ENST00000426882 EIF3AQ14152 1382 aaKnown RBP25.18■■□□□ 1.62
HCG18-235ENST00000426882 PDE3BQ13370 1112 aa25.17■■□□□ 1.62
HCG18-235ENST00000426882 DEKP35659 375 aaKnown RBP25.17■■□□□ 1.62
HCG18-235ENST00000426882 GOLGA2Q08379 1002 aa25.17■■□□□ 1.62
HCG18-235ENST00000426882 HAP1P54257 671 aaPredicted RBP25.16■■□□□ 1.62
HCG18-235ENST00000426882 TPRNQ4KMQ1 711 aa25.15■■□□□ 1.62
HCG18-235ENST00000426882 KIF15Q9NS87 1388 aa25.15■■□□□ 1.62
HCG18-235ENST00000426882 HSCBQ8IWL3 235 aa25.15■■□□□ 1.62
HCG18-235ENST00000426882 PHLDB1Q86UU1 1377 aa25.13■■□□□ 1.61
HCG18-235ENST00000426882 MYBBP1AQ9BQG0 1328 aaKnown RBP25.13■■□□□ 1.61
HCG18-235ENST00000426882 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
HCG18-235ENST00000426882 PTMAP06454 111 aaKnown RBP25.13■■□□□ 1.61
HCG18-235ENST00000426882 RAD54L2Q9Y4B4 1467 aa25.12■■□□□ 1.61
HCG18-235ENST00000426882 CCDC144AA2RUR9 1427 aa25.12■■□□□ 1.61
HCG18-235ENST00000426882 CCDC146Q8IYE0 955 aa25.11■■□□□ 1.61
HCG18-235ENST00000426882 OS9Q13438 667 aaPredicted RBP25.11■■□□□ 1.61
HCG18-235ENST00000426882 FGD6Q6ZV73 1430 aa25.11■■□□□ 1.61
HCG18-235ENST00000426882 SPRYD3Q8NCJ5 442 aa25.09■■□□□ 1.61
HCG18-235ENST00000426882 USP47Q96K76 1375 aa25.09■■□□□ 1.61
HCG18-235ENST00000426882 RWDD1Q9H446 243 aaPredicted RBP25.09■■□□□ 1.61
HCG18-235ENST00000426882 PANK3Q9H999 370 aa25.08■■□□□ 1.61
HCG18-235ENST00000426882 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.61
HCG18-235ENST00000426882 ITPRIPQ8IWB1 547 aa25.06■■□□□ 1.6
HCG18-235ENST00000426882 LRRC9Q6ZRR7 1453 aa25.05■■□□□ 1.6
HCG18-235ENST00000426882 ZBED9Q6R2W3 1325 aa25.05■■□□□ 1.6
HCG18-235ENST00000426882 MYOM3Q5VTT5 1437 aa25.04■■□□□ 1.6
HCG18-235ENST00000426882 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
HCG18-235ENST00000426882 RTF1Q92541 710 aaKnown RBP25.03■■□□□ 1.6
HCG18-235ENST00000426882 IPO9Q96P70 1041 aaKnown RBP25.03■■□□□ 1.6
HCG18-235ENST00000426882 NUTM2DQ5VT03 806 aaPredicted RBP25.02■■□□□ 1.6
HCG18-235ENST00000426882 CALD1Q05682 793 aaKnown RBP25.02■■□□□ 1.6
HCG18-235ENST00000426882 WASHC2CQ9Y4E1 1318 aa25.01■■□□□ 1.59
HCG18-235ENST00000426882 PTPRGP23470 1445 aa25.01■■□□□ 1.59
HCG18-235ENST00000426882 CLUAP1Q96AJ1 413 aa25.01■■□□□ 1.59
HCG18-235ENST00000426882 UACAQ9BZF9 1416 aa25■■□□□ 1.59
HCG18-235ENST00000426882 TRAK1Q9UPV9 953 aa25■■□□□ 1.59
HCG18-235ENST00000426882 KCNJ4P48050 445 aa25■■□□□ 1.59
HCG18-235ENST00000426882 ZRSR1Q15695 479 aaKnown RBP25■■□□□ 1.59
HCG18-235ENST00000426882 TERF2IPQ9NYB0 399 aa25■■□□□ 1.59
HCG18-235ENST00000426882 ARAP1Q96P48 1450 aa25■■□□□ 1.59
HCG18-235ENST00000426882 ZNF644Q9H582 1327 aaPredicted RBP25■■□□□ 1.59
HCG18-235ENST00000426882 APBB1O00213 710 aa25■■□□□ 1.59
HCG18-235ENST00000426882 CENPJQ9HC77 1338 aaPredicted RBP25■■□□□ 1.59
HCG18-235ENST00000426882 SMC4Q9NTJ3 1288 aa24.99■■□□□ 1.59
HCG18-235ENST00000426882 PMFBP1Q8TBY8 1022 aa24.99■■□□□ 1.59
HCG18-235ENST00000426882 SLKQ9H2G2 1235 aaPredicted RBP24.97■■□□□ 1.59
HCG18-235ENST00000426882 DNTTIP2Q5QJE6 756 aaKnown RBP24.97■■□□□ 1.59
HCG18-235ENST00000426882 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
HCG18-235ENST00000426882 NAP1L5Q96NT1 182 aaPredicted RBP24.95■■□□□ 1.58
HCG18-235ENST00000426882 CFAP44Q96MT7 982 aa24.95■■□□□ 1.58
HCG18-235ENST00000426882 FGD1P98174 961 aa24.94■■□□□ 1.58
HCG18-235ENST00000426882 PLCB2Q00722 1185 aa24.94■■□□□ 1.58
HCG18-235ENST00000426882 ERICH3Q5RHP9 1530 aa24.93■■□□□ 1.58
HCG18-235ENST00000426882 CUX1P39880 1505 aa24.93■■□□□ 1.58
HCG18-235ENST00000426882 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
HCG18-235ENST00000426882 PLIN1O60240 522 aa24.92■■□□□ 1.58
HCG18-235ENST00000426882 MCCP23508 829 aa24.92■■□□□ 1.58
HCG18-235ENST00000426882 L1TD1Q5T7N2 865 aaKnown RBP24.92■■□□□ 1.58
HCG18-235ENST00000426882 CCDC7Q96M83 1385 aa24.92■■□□□ 1.58
HCG18-235ENST00000426882 EXOC6Q8TAG9 804 aa24.91■■□□□ 1.58
HCG18-235ENST00000426882 RRP1P56182 461 aaKnown RBP24.91■■□□□ 1.58
HCG18-235ENST00000426882 RRP7AQ9Y3A4 280 aaKnown RBP24.91■■□□□ 1.58
HCG18-235ENST00000426882 RRBP1Q9P2E9 1410 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms