RNA–Protein interactions for RNA: ENST00000425986.1

RTN4R-203, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 2

Gene RTN4R, Length 1,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-203ENST00000425986 RRP7BPQ9NSQ0 103 aa26.62■■□□□ 1.85
RTN4R-203ENST00000425986 ZNF777Q9ULD5 760 aaPredicted RBP26.6■■□□□ 1.85
RTN4R-203ENST00000425986 MAPKBP1O60336 1514 aa26.6■■□□□ 1.85
RTN4R-203ENST00000425986 KDM5BQ9UGL1 1544 aa26.6■■□□□ 1.85
RTN4R-203ENST00000425986 ROCK1Q13464 1354 aa26.58■■□□□ 1.85
RTN4R-203ENST00000425986 GCC2Q8IWJ2 1684 aa26.57■■□□□ 1.84
RTN4R-203ENST00000425986 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
RTN4R-203ENST00000425986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.49■■□□□ 1.83
RTN4R-203ENST00000425986 KCNH8Q96L42 1107 aa26.49■■□□□ 1.83
RTN4R-203ENST00000425986 CDC42BPBQ9Y5S2 1711 aa26.48■■□□□ 1.83
RTN4R-203ENST00000425986 PREX2Q70Z35 1606 aa26.48■■□□□ 1.83
RTN4R-203ENST00000425986 TTC37Q6PGP7 1564 aa26.45■■□□□ 1.83
RTN4R-203ENST00000425986 ACIN1Q9UKV3 1341 aaKnown RBP26.45■■□□□ 1.82
RTN4R-203ENST00000425986 KDM6BO15054 1643 aa26.45■■□□□ 1.82
RTN4R-203ENST00000425986 CROCC2H7BZ55 1655 aa26.44■■□□□ 1.82
RTN4R-203ENST00000425986 NCOA1Q15788 1441 aa26.43■■□□□ 1.82
RTN4R-203ENST00000425986 ADGBQ8N7X0 1667 aa26.42■■□□□ 1.82
RTN4R-203ENST00000425986 ADGRL2O95490 1459 aa26.42■■□□□ 1.82
RTN4R-203ENST00000425986 SIN3AQ96ST3 1273 aa26.4■■□□□ 1.82
RTN4R-203ENST00000425986 HNRNPMP52272 730 aaKnown RBP eCLIP26.4■■□□□ 1.82
RTN4R-203ENST00000425986 TRIM52Q96A61 297 aa26.4■■□□□ 1.82
RTN4R-203ENST00000425986 MYO5CQ9NQX4 1742 aa26.39■■□□□ 1.82
RTN4R-203ENST00000425986 SAMD9LQ8IVG5 1584 aa26.39■■□□□ 1.82
RTN4R-203ENST00000425986 ARHGEF5Q12774 1597 aa26.39■■□□□ 1.81
RTN4R-203ENST00000425986 MBD5Q9P267 1494 aa26.38■■□□□ 1.81
RTN4R-203ENST00000425986 ANKRD30AQ9BXX3 1397 aa26.38■■□□□ 1.81
RTN4R-203ENST00000425986 SHANK2Q9UPX8 1470 aa26.38■■□□□ 1.81
RTN4R-203ENST00000425986 ZNF316A6NFI3 1004 aaPredicted RBP26.38■■□□□ 1.81
RTN4R-203ENST00000425986 TSPY4P0CV99 314 aa26.38■■□□□ 1.81
RTN4R-203ENST00000425986 TSPY10P0CW01 314 aa26.38■■□□□ 1.81
RTN4R-203ENST00000425986 RSPH4AQ5TD94 716 aa26.38■■□□□ 1.81
RTN4R-203ENST00000425986 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
RTN4R-203ENST00000425986 NEUROD1Q13562 356 aa26.36■■□□□ 1.81
RTN4R-203ENST00000425986 TIMELESSQ9UNS1 1208 aa26.36■■□□□ 1.81
RTN4R-203ENST00000425986 PLCH2O75038 1416 aa26.35■■□□□ 1.81
RTN4R-203ENST00000425986 C9orf84Q5VXU9 1444 aa26.34■■□□□ 1.81
RTN4R-203ENST00000425986 WDR7Q9Y4E6 1490 aa26.33■■□□□ 1.81
RTN4R-203ENST00000425986 MPHOSPH9Q99550 1183 aa26.31■■□□□ 1.8
RTN4R-203ENST00000425986 CCDC141Q6ZP82 1450 aa26.31■■□□□ 1.8
RTN4R-203ENST00000425986 KIAA1107Q9UPP5 1409 aa26.3■■□□□ 1.8
RTN4R-203ENST00000425986 PLEKHH2Q8IVE3 1493 aa26.29■■□□□ 1.8
RTN4R-203ENST00000425986 EFCAB2Q5VUJ9 269 aa26.29■■□□□ 1.8
RTN4R-203ENST00000425986 NPM1P06748 294 aaKnown RBP eCLIP26.29■■□□□ 1.8
RTN4R-203ENST00000425986 DENND4BO75064 1496 aaPredicted RBP26.28■■□□□ 1.8
RTN4R-203ENST00000425986 SYCP2Q9BX26 1530 aa26.26■■□□□ 1.79
RTN4R-203ENST00000425986 ASXL2Q76L83 1435 aa26.25■■□□□ 1.79
RTN4R-203ENST00000425986 ANKRD50Q9ULJ7 1429 aa26.25■■□□□ 1.79
RTN4R-203ENST00000425986 DNAJC5Q9H3Z4 198 aa26.24■■□□□ 1.79
RTN4R-203ENST00000425986 ARAP3Q8WWN8 1544 aa26.23■■□□□ 1.79
RTN4R-203ENST00000425986 KIF15Q9NS87 1388 aa26.2■■□□□ 1.78
RTN4R-203ENST00000425986 MAST1Q9Y2H9 1570 aa26.19■■□□□ 1.78
RTN4R-203ENST00000425986 ABCA9Q8IUA7 1624 aa26.19■■□□□ 1.78
RTN4R-203ENST00000425986 ARHGEF12Q9NZN5 1544 aa26.19■■□□□ 1.78
RTN4R-203ENST00000425986 SLC4A1APQ9BWU0 796 aaKnown RBP26.18■■□□□ 1.78
RTN4R-203ENST00000425986 DIEXFQ68CQ4 756 aaKnown RBP26.18■■□□□ 1.78
RTN4R-203ENST00000425986 PPP1R15AO75807 674 aaPredicted RBP26.16■■□□□ 1.78
RTN4R-203ENST00000425986 TONSLQ96HA7 1378 aa26.16■■□□□ 1.78
RTN4R-203ENST00000425986 ABCC1P33527 1531 aa26.15■■□□□ 1.78
RTN4R-203ENST00000425986 PZPP20742 1482 aa26.14■■□□□ 1.78
RTN4R-203ENST00000425986 FOXD1Q16676 465 aa26.13■■□□□ 1.77
RTN4R-203ENST00000425986 ANKRD30BQ9BXX2 1392 aa26.11■■□□□ 1.77
RTN4R-203ENST00000425986 FANCAO15360 1455 aa26.09■■□□□ 1.77
RTN4R-203ENST00000425986 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.77
RTN4R-203ENST00000425986 PLXNC1O60486 1568 aa26.08■■□□□ 1.77
RTN4R-203ENST00000425986 NUP155O75694 1391 aa26.07■■□□□ 1.76
RTN4R-203ENST00000425986 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
RTN4R-203ENST00000425986 KDM5DQ9BY66 1539 aa26.04■■□□□ 1.76
RTN4R-203ENST00000425986 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
RTN4R-203ENST00000425986 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
RTN4R-203ENST00000425986 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
RTN4R-203ENST00000425986 PKD2Q13563 968 aa26.02■■□□□ 1.76
RTN4R-203ENST00000425986 AFAP1Q8N556 730 aa26.02■■□□□ 1.76
RTN4R-203ENST00000425986 DUOX2Q9NRD8 1548 aa26■■□□□ 1.75
RTN4R-203ENST00000425986 RTEL1-TNFRSF6BF6WH68 1400 aa26■■□□□ 1.75
RTN4R-203ENST00000425986 SPAG9O60271 1321 aaKnown RBP26■■□□□ 1.75
RTN4R-203ENST00000425986 RPRD2Q5VT52 1461 aaKnown RBP25.99■■□□□ 1.75
RTN4R-203ENST00000425986 CD109Q6YHK3 1445 aa25.98■■□□□ 1.75
RTN4R-203ENST00000425986 ADGRL1O94910 1474 aa25.98■■□□□ 1.75
RTN4R-203ENST00000425986 SCAPERQ9BY12 1400 aa25.98■■□□□ 1.75
RTN4R-203ENST00000425986 ERBINQ96RT1 1412 aa25.94■■□□□ 1.74
RTN4R-203ENST00000425986 L3MBTL2Q969R5 705 aa25.93■■□□□ 1.74
RTN4R-203ENST00000425986 UNC13BO14795 1591 aa25.92■■□□□ 1.74
RTN4R-203ENST00000425986 ZFYVE16Q7Z3T8 1539 aa25.91■■□□□ 1.74
RTN4R-203ENST00000425986 FAM135AQ9P2D6 1515 aa25.9■■□□□ 1.74
RTN4R-203ENST00000425986 CFAP74Q9C0B2 1584 aa25.89■■□□□ 1.74
RTN4R-203ENST00000425986 ATP7AQ04656 1500 aa25.87■■□□□ 1.73
RTN4R-203ENST00000425986 INO80Q9ULG1 1556 aaPredicted RBP25.87■■□□□ 1.73
RTN4R-203ENST00000425986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.87■■□□□ 1.73
RTN4R-203ENST00000425986 TEX14Q8IWB6 1497 aa25.84■■□□□ 1.73
RTN4R-203ENST00000425986 MAGI2Q86UL8 1455 aa25.83■■□□□ 1.73
RTN4R-203ENST00000425986 IQGAP3Q86VI3 1631 aa25.83■■□□□ 1.73
RTN4R-203ENST00000425986 ZNF518AQ6AHZ1 1483 aa25.83■■□□□ 1.72
RTN4R-203ENST00000425986 MYT1LQ9UL68 1186 aa25.82■■□□□ 1.72
RTN4R-203ENST00000425986 NEO1Q92859 1461 aa25.8■■□□□ 1.72
RTN4R-203ENST00000425986 GLI2P10070 1586 aa25.79■■□□□ 1.72
RTN4R-203ENST00000425986 DHX29Q7Z478 1369 aaKnown RBP25.77■■□□□ 1.72
RTN4R-203ENST00000425986 MAP3K4Q9Y6R4 1608 aa25.76■■□□□ 1.71
RTN4R-203ENST00000425986 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
RTN4R-203ENST00000425986 KIDINS220Q9ULH0 1771 aa25.76■■□□□ 1.71
RTN4R-203ENST00000425986 KDM5CP41229 1560 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms