RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ZCCHC11Q5TAX3 1644 aaKnown RBP21.3■■□□□ 1
CDK3-201ENST00000425876 DAPK1P53355 1430 aa21.3■■□□□ 1
CDK3-201ENST00000425876 CDC42BPAQ5VT25 1732 aa21.3■■□□□ 1
CDK3-201ENST00000425876 CAMSAP2Q08AD1 1489 aa21.3■■□□□ 1
CDK3-201ENST00000425876 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
CDK3-201ENST00000425876 ROCK1Q13464 1354 aa21.29■■□□□ 1
CDK3-201ENST00000425876 ABCC5O15440 1437 aa21.28■■□□□ 1
CDK3-201ENST00000425876 ZNF644Q9H582 1327 aaPredicted RBP21.27■■□□□ 1
CDK3-201ENST00000425876 GCC2Q8IWJ2 1684 aa21.24■□□□□ 0.99
CDK3-201ENST00000425876 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
CDK3-201ENST00000425876 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
CDK3-201ENST00000425876 PREX2Q70Z35 1606 aa21.23■□□□□ 0.99
CDK3-201ENST00000425876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.22■□□□□ 0.99
CDK3-201ENST00000425876 NPM1P06748 294 aaKnown RBP eCLIP21.21■□□□□ 0.99
CDK3-201ENST00000425876 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
CDK3-201ENST00000425876 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
CDK3-201ENST00000425876 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
CDK3-201ENST00000425876 ADGRL2O95490 1459 aa21.18■□□□□ 0.98
CDK3-201ENST00000425876 RRP7BPQ9NSQ0 103 aa21.18■□□□□ 0.98
CDK3-201ENST00000425876 CDC42BPBQ9Y5S2 1711 aa21.18■□□□□ 0.98
CDK3-201ENST00000425876 KIF13AQ9H1H9 1805 aa21.17■□□□□ 0.98
CDK3-201ENST00000425876 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
CDK3-201ENST00000425876 CROCC2H7BZ55 1655 aa21.17■□□□□ 0.98
CDK3-201ENST00000425876 ARHGEF5Q12774 1597 aa21.16■□□□□ 0.98
CDK3-201ENST00000425876 WDR7Q9Y4E6 1490 aa21.15■□□□□ 0.98
CDK3-201ENST00000425876 RSPH4AQ5TD94 716 aa21.14■□□□□ 0.98
CDK3-201ENST00000425876 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.97
CDK3-201ENST00000425876 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
CDK3-201ENST00000425876 DIP2BQ9P265 1576 aa21.13■□□□□ 0.97
CDK3-201ENST00000425876 PLCH2O75038 1416 aa21.13■□□□□ 0.97
CDK3-201ENST00000425876 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
CDK3-201ENST00000425876 ASXL2Q76L83 1435 aa21.13■□□□□ 0.97
CDK3-201ENST00000425876 SAMD9LQ8IVG5 1584 aa21.13■□□□□ 0.97
CDK3-201ENST00000425876 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
CDK3-201ENST00000425876 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
CDK3-201ENST00000425876 PLEKHH2Q8IVE3 1493 aa21.12■□□□□ 0.97
CDK3-201ENST00000425876 ARHGAP5Q13017 1502 aa21.11■□□□□ 0.97
CDK3-201ENST00000425876 ARAP3Q8WWN8 1544 aa21.11■□□□□ 0.97
CDK3-201ENST00000425876 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
CDK3-201ENST00000425876 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
CDK3-201ENST00000425876 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.96
CDK3-201ENST00000425876 CCDC141Q6ZP82 1450 aa21.08■□□□□ 0.96
CDK3-201ENST00000425876 TSPY4P0CV99 314 aa21.07■□□□□ 0.96
CDK3-201ENST00000425876 TSPY10P0CW01 314 aa21.07■□□□□ 0.96
CDK3-201ENST00000425876 KDM6BO15054 1643 aa21.07■□□□□ 0.96
CDK3-201ENST00000425876 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
CDK3-201ENST00000425876 HNRNPMP52272 730 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDK3-201ENST00000425876 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
CDK3-201ENST00000425876 TIMELESSQ9UNS1 1208 aa21.04■□□□□ 0.96
CDK3-201ENST00000425876 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
CDK3-201ENST00000425876 SYCP2Q9BX26 1530 aa21.02■□□□□ 0.96
CDK3-201ENST00000425876 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.95
CDK3-201ENST00000425876 TRIM52Q96A61 297 aa20.99■□□□□ 0.95
CDK3-201ENST00000425876 GLI2P10070 1586 aa20.99■□□□□ 0.95
CDK3-201ENST00000425876 ANKRD50Q9ULJ7 1429 aa20.98■□□□□ 0.95
CDK3-201ENST00000425876 ABCC1P33527 1531 aa20.97■□□□□ 0.95
CDK3-201ENST00000425876 TSPOAP1O95153 1857 aa20.97■□□□□ 0.95
CDK3-201ENST00000425876 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
CDK3-201ENST00000425876 DENND4BO75064 1496 aaPredicted RBP20.96■□□□□ 0.95
CDK3-201ENST00000425876 ARHGEF12Q9NZN5 1544 aa20.95■□□□□ 0.94
CDK3-201ENST00000425876 KIF15Q9NS87 1388 aa20.95■□□□□ 0.94
CDK3-201ENST00000425876 MAP3K4Q9Y6R4 1608 aa20.94■□□□□ 0.94
CDK3-201ENST00000425876 SIN3AQ96ST3 1273 aa20.93■□□□□ 0.94
CDK3-201ENST00000425876 PPRC1Q5VV67 1664 aaKnown RBP20.93■□□□□ 0.94
CDK3-201ENST00000425876 PLXNC1O60486 1568 aa20.92■□□□□ 0.94
CDK3-201ENST00000425876 FANCAO15360 1455 aa20.92■□□□□ 0.94
CDK3-201ENST00000425876 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.94
CDK3-201ENST00000425876 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
CDK3-201ENST00000425876 PZPP20742 1482 aa20.88■□□□□ 0.93
CDK3-201ENST00000425876 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
CDK3-201ENST00000425876 KDM5DQ9BY66 1539 aa20.87■□□□□ 0.93
CDK3-201ENST00000425876 TRAPPC8Q9Y2L5 1435 aa20.87■□□□□ 0.93
CDK3-201ENST00000425876 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
CDK3-201ENST00000425876 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
CDK3-201ENST00000425876 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
CDK3-201ENST00000425876 ANKRD30BQ9BXX2 1392 aa20.84■□□□□ 0.93
CDK3-201ENST00000425876 CFAP74Q9C0B2 1584 aa20.83■□□□□ 0.92
CDK3-201ENST00000425876 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
CDK3-201ENST00000425876 ADGRL1O94910 1474 aa20.82■□□□□ 0.92
CDK3-201ENST00000425876 SPAG9O60271 1321 aaKnown RBP20.81■□□□□ 0.92
CDK3-201ENST00000425876 PPP1R15AO75807 674 aaPredicted RBP20.8■□□□□ 0.92
CDK3-201ENST00000425876 ERBINQ96RT1 1412 aa20.8■□□□□ 0.92
CDK3-201ENST00000425876 NUP155O75694 1391 aa20.8■□□□□ 0.92
CDK3-201ENST00000425876 SCAPERQ9BY12 1400 aa20.8■□□□□ 0.92
CDK3-201ENST00000425876 ZFYVE16Q7Z3T8 1539 aa20.79■□□□□ 0.92
CDK3-201ENST00000425876 AFAP1Q8N556 730 aa20.77■□□□□ 0.92
CDK3-201ENST00000425876 UNC13BO14795 1591 aa20.77■□□□□ 0.92
CDK3-201ENST00000425876 TEX14Q8IWB6 1497 aa20.76■□□□□ 0.91
CDK3-201ENST00000425876 RPRD2Q5VT52 1461 aaKnown RBP20.75■□□□□ 0.91
CDK3-201ENST00000425876 INO80Q9ULG1 1556 aaPredicted RBP20.75■□□□□ 0.91
CDK3-201ENST00000425876 NEO1Q92859 1461 aa20.75■□□□□ 0.91
CDK3-201ENST00000425876 PKD2Q13563 968 aa20.74■□□□□ 0.91
CDK3-201ENST00000425876 ATP7AQ04656 1500 aa20.74■□□□□ 0.91
CDK3-201ENST00000425876 ZNF518AQ6AHZ1 1483 aa20.73■□□□□ 0.91
CDK3-201ENST00000425876 FOXD1Q16676 465 aa20.73■□□□□ 0.91
CDK3-201ENST00000425876 MAGI2Q86UL8 1455 aa20.73■□□□□ 0.91
CDK3-201ENST00000425876 FAM135AQ9P2D6 1515 aa20.71■□□□□ 0.91
CDK3-201ENST00000425876 POGZQ7Z3K3 1410 aa20.69■□□□□ 0.9
CDK3-201ENST00000425876 COL17A1Q9UMD9 1497 aaPredicted RBP20.68■□□□□ 0.9
CDK3-201ENST00000425876 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms