RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 NEUROD2Q15784 382 aa18.05■□□□□ 0.48
DENND3-202ENST00000424248 RGS3P49796 1198 aa18.04■□□□□ 0.48
DENND3-202ENST00000424248 IPO9Q96P70 1041 aaKnown RBP18.04■□□□□ 0.48
DENND3-202ENST00000424248 NAP1L5Q96NT1 182 aaPredicted RBP18.03■□□□□ 0.48
DENND3-202ENST00000424248 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.47
DENND3-202ENST00000424248 ZBTB7CA1YPR0 619 aa18.01■□□□□ 0.47
DENND3-202ENST00000424248 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
DENND3-202ENST00000424248 CASC1Q6TDU7 716 aa18.01■□□□□ 0.47
DENND3-202ENST00000424248 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
DENND3-202ENST00000424248 RALBP1Q15311 655 aa18■□□□□ 0.47
DENND3-202ENST00000424248 USP35Q9P2H5 1018 aa18■□□□□ 0.47
DENND3-202ENST00000424248 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
DENND3-202ENST00000424248 FOXD1Q16676 465 aa17.97■□□□□ 0.47
DENND3-202ENST00000424248 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
DENND3-202ENST00000424248 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
DENND3-202ENST00000424248 FRAT1Q92837 279 aaPredicted RBP17.97■□□□□ 0.47
DENND3-202ENST00000424248 RCAN3Q9UKA8 241 aa17.97■□□□□ 0.47
DENND3-202ENST00000424248 ROCK2O75116 1388 aaKnown RBP17.97■□□□□ 0.47
DENND3-202ENST00000424248 HAP1P54257 671 aaPredicted RBP17.95■□□□□ 0.46
DENND3-202ENST00000424248 PDE3BQ13370 1112 aa17.95■□□□□ 0.46
DENND3-202ENST00000424248 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
DENND3-202ENST00000424248 PTMAP06454 111 aaKnown RBP17.94■□□□□ 0.46
DENND3-202ENST00000424248 SRPK2P78362 688 aaKnown RBP17.94■□□□□ 0.46
DENND3-202ENST00000424248 GGT6Q6P531 493 aa17.94■□□□□ 0.46
DENND3-202ENST00000424248 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
DENND3-202ENST00000424248 JPH4Q96JJ6 628 aa17.93■□□□□ 0.46
DENND3-202ENST00000424248 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
DENND3-202ENST00000424248 HSCBQ8IWL3 235 aa17.9■□□□□ 0.46
DENND3-202ENST00000424248 CFAP44Q96MT7 982 aa17.9■□□□□ 0.46
DENND3-202ENST00000424248 PTMSP20962 102 aa17.9■□□□□ 0.46
DENND3-202ENST00000424248 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
DENND3-202ENST00000424248 PLEKHG5O94827 1062 aa17.88■□□□□ 0.45
DENND3-202ENST00000424248 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
DENND3-202ENST00000424248 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
DENND3-202ENST00000424248 A0A0G2JS52 829 aa17.86■□□□□ 0.45
DENND3-202ENST00000424248 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
DENND3-202ENST00000424248 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.45
DENND3-202ENST00000424248 ZBED9Q6R2W3 1325 aa17.85■□□□□ 0.45
DENND3-202ENST00000424248 IGF1RP08069 1367 aa17.85■□□□□ 0.45
DENND3-202ENST00000424248 KIF3BO15066 747 aa17.84■□□□□ 0.45
DENND3-202ENST00000424248 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
DENND3-202ENST00000424248 NLRP13Q86W25 1043 aa17.83■□□□□ 0.45
DENND3-202ENST00000424248 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
DENND3-202ENST00000424248 PHLDB1Q86UU1 1377 aa17.82■□□□□ 0.44
DENND3-202ENST00000424248 LMOD2Q6P5Q4 547 aa17.82■□□□□ 0.44
DENND3-202ENST00000424248 MLECQ14165 292 aa17.81■□□□□ 0.44
DENND3-202ENST00000424248 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
DENND3-202ENST00000424248 IPO8O15397 1037 aaKnown RBP17.81■□□□□ 0.44
DENND3-202ENST00000424248 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
DENND3-202ENST00000424248 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
DENND3-202ENST00000424248 GBP4Q96PP9 640 aa17.79■□□□□ 0.44
DENND3-202ENST00000424248 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
DENND3-202ENST00000424248 STK26Q9P289 416 aa17.78■□□□□ 0.44
DENND3-202ENST00000424248 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
DENND3-202ENST00000424248 PTPRGP23470 1445 aa17.76■□□□□ 0.43
DENND3-202ENST00000424248 CCDC144AA2RUR9 1427 aa17.76■□□□□ 0.43
DENND3-202ENST00000424248 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
DENND3-202ENST00000424248 U2AF1L5P0DN76 240 aaPredicted RBP17.76■□□□□ 0.43
DENND3-202ENST00000424248 U2AF1Q01081 240 aaKnown RBP eCLIP17.76■□□□□ 0.43
DENND3-202ENST00000424248 TERF2IPQ9NYB0 399 aa17.75■□□□□ 0.43
DENND3-202ENST00000424248 PMFBP1Q8TBY8 1022 aa17.75■□□□□ 0.43
DENND3-202ENST00000424248 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
DENND3-202ENST00000424248 KIF15Q9NS87 1388 aa17.74■□□□□ 0.43
DENND3-202ENST00000424248 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
DENND3-202ENST00000424248 CHMP4AQ9BY43 222 aa17.73■□□□□ 0.43
DENND3-202ENST00000424248 UACAQ9BZF9 1416 aa17.73■□□□□ 0.43
DENND3-202ENST00000424248 ZRSR1Q15695 479 aaKnown RBP17.73■□□□□ 0.43
DENND3-202ENST00000424248 MYOM3Q5VTT5 1437 aa17.72■□□□□ 0.43
DENND3-202ENST00000424248 WASHC2CQ9Y4E1 1318 aa17.72■□□□□ 0.43
DENND3-202ENST00000424248 GOLGA6L3A6NEY3 463 aa17.72■□□□□ 0.43
DENND3-202ENST00000424248 PDE4AP27815 886 aa17.71■□□□□ 0.43
DENND3-202ENST00000424248 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
DENND3-202ENST00000424248 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.43
DENND3-202ENST00000424248 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
DENND3-202ENST00000424248 CUX1P39880 1505 aa17.71■□□□□ 0.42
DENND3-202ENST00000424248 MYBBP1AQ9BQG0 1328 aaKnown RBP17.7■□□□□ 0.42
DENND3-202ENST00000424248 CENPQQ7L2Z9 268 aaPredicted RBP17.69■□□□□ 0.42
DENND3-202ENST00000424248 GSE1Q14687 1217 aa17.69■□□□□ 0.42
DENND3-202ENST00000424248 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
DENND3-202ENST00000424248 KIF21BO75037 1637 aa17.69■□□□□ 0.42
DENND3-202ENST00000424248 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
DENND3-202ENST00000424248 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
DENND3-202ENST00000424248 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
DENND3-202ENST00000424248 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
DENND3-202ENST00000424248 MCCP23508 829 aa17.67■□□□□ 0.42
DENND3-202ENST00000424248 NRDCO43847 1150 aa17.66■□□□□ 0.42
DENND3-202ENST00000424248 SOX12O15370 315 aa17.66■□□□□ 0.42
DENND3-202ENST00000424248 GOLGA6L6A8MZA4 724 aa17.66■□□□□ 0.42
DENND3-202ENST00000424248 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
DENND3-202ENST00000424248 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
DENND3-202ENST00000424248 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
DENND3-202ENST00000424248 KCNJ4P48050 445 aa17.65■□□□□ 0.42
DENND3-202ENST00000424248 LRRC9Q6ZRR7 1453 aa17.64■□□□□ 0.41
DENND3-202ENST00000424248 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
DENND3-202ENST00000424248 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
DENND3-202ENST00000424248 USP47Q96K76 1375 aa17.63■□□□□ 0.41
DENND3-202ENST00000424248 FGD1P98174 961 aa17.63■□□□□ 0.41
DENND3-202ENST00000424248 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
DENND3-202ENST00000424248 LMOD3Q0VAK6 560 aa17.62■□□□□ 0.41
DENND3-202ENST00000424248 CFTRP13569 1480 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms