RNA–Protein interactions for RNA: ENST00000424214.5

GPN1-203, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2 BASIC

Gene GPN1, Length 1,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-203ENST00000424214 PTPN23Q9H3S7 1636 aa9.75□□□□□ -0.85
GPN1-203ENST00000424214 CLCN1P35523 988 aa9.75□□□□□ -0.85
GPN1-203ENST00000424214 NAP1L5Q96NT1 182 aaPredicted RBP9.75□□□□□ -0.85
GPN1-203ENST00000424214 PNNQ9H307 717 aaKnown RBP9.75□□□□□ -0.85
GPN1-203ENST00000424214 MAPK8IP2Q13387 824 aaPredicted RBP9.74□□□□□ -0.85
GPN1-203ENST00000424214 FAM9BQ8IZU0 186 aa9.74□□□□□ -0.85
GPN1-203ENST00000424214 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
GPN1-203ENST00000424214 CALD1Q05682 793 aaKnown RBP9.73□□□□□ -0.85
GPN1-203ENST00000424214 GCC2Q8IWJ2 1684 aa9.73□□□□□ -0.85
GPN1-203ENST00000424214 DCAF11Q8TEB1 546 aa9.73□□□□□ -0.85
GPN1-203ENST00000424214 CCDC7Q96M83 1385 aa9.73□□□□□ -0.85
GPN1-203ENST00000424214 AAMPQ13685 434 aa9.71□□□□□ -0.85
GPN1-203ENST00000424214 TPM2P07951 284 aa9.7□□□□□ -0.86
GPN1-203ENST00000424214 EIF4G2P78344 907 aaKnown RBP eCLIP9.7□□□□□ -0.86
GPN1-203ENST00000424214 HFM1A2PYH4 1435 aa9.7□□□□□ -0.86
GPN1-203ENST00000424214 PHLDB1Q86UU1 1377 aa9.69□□□□□ -0.86
GPN1-203ENST00000424214 HSPA5P11021 654 aaKnown RBP9.69□□□□□ -0.86
GPN1-203ENST00000424214 RRP1P56182 461 aaKnown RBP9.69□□□□□ -0.86
GPN1-203ENST00000424214 FGD1P98174 961 aa9.69□□□□□ -0.86
GPN1-203ENST00000424214 RBM10P98175 930 aaKnown RBP9.69□□□□□ -0.86
GPN1-203ENST00000424214 CCDC184Q52MB2 194 aa9.69□□□□□ -0.86
GPN1-203ENST00000424214 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
GPN1-203ENST00000424214 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
GPN1-203ENST00000424214 UNC13AQ9UPW8 1703 aa9.68□□□□□ -0.86
GPN1-203ENST00000424214 FRAT2O75474 233 aaPredicted RBP9.66□□□□□ -0.86
GPN1-203ENST00000424214 RANGAP1P46060 587 aaPredicted RBP9.65□□□□□ -0.87
GPN1-203ENST00000424214 KTN1Q86UP2 1357 aaKnown RBP9.64□□□□□ -0.87
GPN1-203ENST00000424214 PDE4CQ08493 712 aa9.64□□□□□ -0.87
GPN1-203ENST00000424214 MAP7D2Q96T17 732 aa9.64□□□□□ -0.87
GPN1-203ENST00000424214 CTTNBP2Q8WZ74 1663 aa9.64□□□□□ -0.87
GPN1-203ENST00000424214 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
GPN1-203ENST00000424214 CUX1P39880 1505 aa9.63□□□□□ -0.87
GPN1-203ENST00000424214 FAM50AQ14320 339 aaKnown RBP9.63□□□□□ -0.87
GPN1-203ENST00000424214 FOXD4L1Q9NU39 408 aa9.63□□□□□ -0.87
GPN1-203ENST00000424214 FYCO1Q9BQS8 1478 aa9.63□□□□□ -0.87
GPN1-203ENST00000424214 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
GPN1-203ENST00000424214 DNAJC5BQ9UF47 199 aa9.62□□□□□ -0.87
GPN1-203ENST00000424214 PRDM4Q9UKN5 801 aa9.62□□□□□ -0.87
GPN1-203ENST00000424214 KIF27Q86VH2 1401 aa9.62□□□□□ -0.87
GPN1-203ENST00000424214 ZMYM4Q5VZL5 1548 aa9.62□□□□□ -0.87
GPN1-203ENST00000424214 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
GPN1-203ENST00000424214 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
GPN1-203ENST00000424214 MIA2Q96PC5 1412 aa9.62□□□□□ -0.87
GPN1-203ENST00000424214 E9PCH4 1651 aa9.61□□□□□ -0.87
GPN1-203ENST00000424214 A0A0U1RQG5 324 aaPredicted RBP9.61□□□□□ -0.87
GPN1-203ENST00000424214 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
GPN1-203ENST00000424214 AQRO60306 1485 aaKnown RBP eCLIP9.6□□□□□ -0.87
GPN1-203ENST00000424214 FGD6Q6ZV73 1430 aa9.6□□□□□ -0.87
GPN1-203ENST00000424214 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
GPN1-203ENST00000424214 GOLGA6L3A6NEY3 463 aa9.6□□□□□ -0.87
GPN1-203ENST00000424214 PLEKHH2Q8IVE3 1493 aa9.6□□□□□ -0.87
GPN1-203ENST00000424214 DHX29Q7Z478 1369 aaKnown RBP9.6□□□□□ -0.87
GPN1-203ENST00000424214 FSD2A1L4K1 749 aa9.59□□□□□ -0.87
GPN1-203ENST00000424214 RCAN3Q9UKA8 241 aa9.59□□□□□ -0.87
GPN1-203ENST00000424214 MYOM3Q5VTT5 1437 aa9.59□□□□□ -0.87
GPN1-203ENST00000424214 NCLP19338 710 aaKnown RBP9.59□□□□□ -0.87
GPN1-203ENST00000424214 EFCAB5A4FU69 1503 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 CCDC144AA2RUR9 1427 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 NAIPQ13075 1403 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 INSRP06213 1382 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 TERF1P54274 439 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 BECN1Q14457 450 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 SMAP1Q8IYB5 467 aaPredicted RBP9.58□□□□□ -0.88
GPN1-203ENST00000424214 POGKQ9P215 609 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 PRDM2Q13029 1718 aa9.58□□□□□ -0.88
GPN1-203ENST00000424214 KIF14Q15058 1648 aa9.57□□□□□ -0.88
GPN1-203ENST00000424214 ROCK2O75116 1388 aaKnown RBP9.57□□□□□ -0.88
GPN1-203ENST00000424214 ARID4BQ4LE39 1312 aaPredicted RBP9.57□□□□□ -0.88
GPN1-203ENST00000424214 PDIA4P13667 645 aaKnown RBP9.57□□□□□ -0.88
GPN1-203ENST00000424214 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
GPN1-203ENST00000424214 BRD4O60885 1362 aaPredicted RBP9.57□□□□□ -0.88
GPN1-203ENST00000424214 KIF7Q2M1P5 1343 aa9.57□□□□□ -0.88
GPN1-203ENST00000424214 MRE11P49959 708 aa9.56□□□□□ -0.88
GPN1-203ENST00000424214 CENPQQ7L2Z9 268 aaPredicted RBP9.56□□□□□ -0.88
GPN1-203ENST00000424214 MTERF4Q7Z6M4 381 aaKnown RBP9.56□□□□□ -0.88
GPN1-203ENST00000424214 ESPNB1AK53 854 aa9.56□□□□□ -0.88
GPN1-203ENST00000424214 C8orf34Q49A92 452 aa9.56□□□□□ -0.88
GPN1-203ENST00000424214 BCORL1Q5H9F3 1711 aa9.56□□□□□ -0.88
GPN1-203ENST00000424214 KDM2BQ8NHM5 1336 aa9.55□□□□□ -0.88
GPN1-203ENST00000424214 TEX14Q8IWB6 1497 aa9.55□□□□□ -0.88
GPN1-203ENST00000424214 XRCC6P12956 609 aaKnown RBP eCLIP9.55□□□□□ -0.88
GPN1-203ENST00000424214 SLC4A3P48751 1232 aa9.55□□□□□ -0.88
GPN1-203ENST00000424214 THOC2Q8NI27 1593 aaKnown RBP9.55□□□□□ -0.88
GPN1-203ENST00000424214 KIF21AQ7Z4S6 1674 aa9.54□□□□□ -0.88
GPN1-203ENST00000424214 PNISRQ8TF01 805 aaKnown RBP9.53□□□□□ -0.88
GPN1-203ENST00000424214 KDM5CP41229 1560 aa9.53□□□□□ -0.88
GPN1-203ENST00000424214 CASKIN1Q8WXD9 1431 aa9.53□□□□□ -0.88
GPN1-203ENST00000424214 RPRD2Q5VT52 1461 aaKnown RBP9.53□□□□□ -0.88
GPN1-203ENST00000424214 UTP14CQ5TAP6 766 aaKnown RBP9.52□□□□□ -0.89
GPN1-203ENST00000424214 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
GPN1-203ENST00000424214 KIF15Q9NS87 1388 aa9.51□□□□□ -0.89
GPN1-203ENST00000424214 TRIM44Q96DX7 344 aaPredicted RBP9.51□□□□□ -0.89
GPN1-203ENST00000424214 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
GPN1-203ENST00000424214 SCAPERQ9BY12 1400 aa9.51□□□□□ -0.89
GPN1-203ENST00000424214 DENND4BO75064 1496 aaPredicted RBP9.51□□□□□ -0.89
GPN1-203ENST00000424214 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.51□□□□□ -0.89
GPN1-203ENST00000424214 EHBP1L1Q8N3D4 1523 aa9.5□□□□□ -0.89
GPN1-203ENST00000424214 RGS3P49796 1198 aa9.5□□□□□ -0.89
GPN1-203ENST00000424214 TMC1Q8TDI8 760 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms