RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 TSPOAP1O95153 1857 aa18.5■□□□□ 0.55
LMO3-206ENST00000424192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.5■□□□□ 0.55
LMO3-206ENST00000424192 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
LMO3-206ENST00000424192 TTC37Q6PGP7 1564 aa18.49■□□□□ 0.55
LMO3-206ENST00000424192 ARAP3Q8WWN8 1544 aa18.48■□□□□ 0.55
LMO3-206ENST00000424192 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
LMO3-206ENST00000424192 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
LMO3-206ENST00000424192 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
LMO3-206ENST00000424192 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
LMO3-206ENST00000424192 NEO1Q92859 1461 aa18.45■□□□□ 0.54
LMO3-206ENST00000424192 KDM6BO15054 1643 aa18.44■□□□□ 0.54
LMO3-206ENST00000424192 APLP2Q06481 763 aa18.41■□□□□ 0.54
LMO3-206ENST00000424192 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
LMO3-206ENST00000424192 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
LMO3-206ENST00000424192 PLCH2O75038 1416 aa18.4■□□□□ 0.54
LMO3-206ENST00000424192 FANCAO15360 1455 aa18.39■□□□□ 0.53
LMO3-206ENST00000424192 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
LMO3-206ENST00000424192 ITSN2Q9NZM3 1697 aa18.37■□□□□ 0.53
LMO3-206ENST00000424192 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
LMO3-206ENST00000424192 CDC42BPAQ5VT25 1732 aa18.34■□□□□ 0.53
LMO3-206ENST00000424192 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.53
LMO3-206ENST00000424192 NCOA2Q15596 1464 aa18.32■□□□□ 0.52
LMO3-206ENST00000424192 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
LMO3-206ENST00000424192 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
LMO3-206ENST00000424192 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
LMO3-206ENST00000424192 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
LMO3-206ENST00000424192 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
LMO3-206ENST00000424192 DENND4BO75064 1496 aaPredicted RBP18.28■□□□□ 0.52
LMO3-206ENST00000424192 PLEKHH2Q8IVE3 1493 aa18.28■□□□□ 0.52
LMO3-206ENST00000424192 ABCC1P33527 1531 aa18.27■□□□□ 0.51
LMO3-206ENST00000424192 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
LMO3-206ENST00000424192 POGZQ7Z3K3 1410 aa18.25■□□□□ 0.51
LMO3-206ENST00000424192 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
LMO3-206ENST00000424192 RICTORQ6R327 1708 aa18.24■□□□□ 0.51
LMO3-206ENST00000424192 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
LMO3-206ENST00000424192 FRMPD1Q5SYB0 1578 aa18.24■□□□□ 0.51
LMO3-206ENST00000424192 SAMD9LQ8IVG5 1584 aa18.22■□□□□ 0.51
LMO3-206ENST00000424192 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
LMO3-206ENST00000424192 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
LMO3-206ENST00000424192 SCAPERQ9BY12 1400 aa18.22■□□□□ 0.51
LMO3-206ENST00000424192 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
LMO3-206ENST00000424192 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
LMO3-206ENST00000424192 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
LMO3-206ENST00000424192 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
LMO3-206ENST00000424192 KDM5CP41229 1560 aa18.19■□□□□ 0.5
LMO3-206ENST00000424192 ARHGEF40Q8TER5 1519 aa18.18■□□□□ 0.5
LMO3-206ENST00000424192 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
LMO3-206ENST00000424192 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
LMO3-206ENST00000424192 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
LMO3-206ENST00000424192 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
LMO3-206ENST00000424192 ZFYVE16Q7Z3T8 1539 aa18.14■□□□□ 0.49
LMO3-206ENST00000424192 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
LMO3-206ENST00000424192 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
LMO3-206ENST00000424192 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
LMO3-206ENST00000424192 ARHGEF12Q9NZN5 1544 aa18.12■□□□□ 0.49
LMO3-206ENST00000424192 ARHGEF5Q12774 1597 aa18.12■□□□□ 0.49
LMO3-206ENST00000424192 CCDC141Q6ZP82 1450 aa18.11■□□□□ 0.49
LMO3-206ENST00000424192 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
LMO3-206ENST00000424192 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
LMO3-206ENST00000424192 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
LMO3-206ENST00000424192 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
LMO3-206ENST00000424192 MBD5Q9P267 1494 aa18.08■□□□□ 0.49
LMO3-206ENST00000424192 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
LMO3-206ENST00000424192 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
LMO3-206ENST00000424192 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
LMO3-206ENST00000424192 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
LMO3-206ENST00000424192 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
LMO3-206ENST00000424192 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
LMO3-206ENST00000424192 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
LMO3-206ENST00000424192 C9orf84Q5VXU9 1444 aa18.04■□□□□ 0.48
LMO3-206ENST00000424192 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
LMO3-206ENST00000424192 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
LMO3-206ENST00000424192 ZNF644Q9H582 1327 aaPredicted RBP18.03■□□□□ 0.48
LMO3-206ENST00000424192 ATP10AO60312 1499 aa18.03■□□□□ 0.48
LMO3-206ENST00000424192 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
LMO3-206ENST00000424192 ABCA6Q8N139 1617 aa18.03■□□□□ 0.48
LMO3-206ENST00000424192 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
LMO3-206ENST00000424192 YEATS2Q9ULM3 1422 aa18.03■□□□□ 0.48
LMO3-206ENST00000424192 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
LMO3-206ENST00000424192 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
LMO3-206ENST00000424192 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
LMO3-206ENST00000424192 CROCC2H7BZ55 1655 aa18.01■□□□□ 0.47
LMO3-206ENST00000424192 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
LMO3-206ENST00000424192 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
LMO3-206ENST00000424192 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
LMO3-206ENST00000424192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.97■□□□□ 0.47
LMO3-206ENST00000424192 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
LMO3-206ENST00000424192 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
LMO3-206ENST00000424192 AGLP35573 1532 aa17.97■□□□□ 0.47
LMO3-206ENST00000424192 DAPK1P53355 1430 aa17.96■□□□□ 0.47
LMO3-206ENST00000424192 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
LMO3-206ENST00000424192 A2MP01023 1474 aa17.93■□□□□ 0.46
LMO3-206ENST00000424192 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
LMO3-206ENST00000424192 ABCC5O15440 1437 aa17.92■□□□□ 0.46
LMO3-206ENST00000424192 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
LMO3-206ENST00000424192 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
LMO3-206ENST00000424192 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
LMO3-206ENST00000424192 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
LMO3-206ENST00000424192 SIGLEC1Q9BZZ2 1709 aa17.88■□□□□ 0.45
LMO3-206ENST00000424192 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms