RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
CLCN3P1-201ENST00000423965 PHLDB1Q86UU1 1377 aa14.29□□□□□ -0.12
CLCN3P1-201ENST00000423965 CFAP43Q8NDM7 1665 aa14.28□□□□□ -0.12
CLCN3P1-201ENST00000423965 KCNH8Q96L42 1107 aa14.28□□□□□ -0.12
CLCN3P1-201ENST00000423965 ARID4BQ4LE39 1312 aaPredicted RBP14.27□□□□□ -0.12
CLCN3P1-201ENST00000423965 BCORL1Q5H9F3 1711 aa14.26□□□□□ -0.13
CLCN3P1-201ENST00000423965 MADDQ8WXG6 1647 aa14.24□□□□□ -0.13
CLCN3P1-201ENST00000423965 DISP1Q96F81 1524 aa14.24□□□□□ -0.13
CLCN3P1-201ENST00000423965 SSUH2Q9Y2M2 353 aa14.23□□□□□ -0.13
CLCN3P1-201ENST00000423965 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
CLCN3P1-201ENST00000423965 IQGAP2Q13576 1575 aa14.22□□□□□ -0.13
CLCN3P1-201ENST00000423965 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
CLCN3P1-201ENST00000423965 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
CLCN3P1-201ENST00000423965 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.14
CLCN3P1-201ENST00000423965 RAPGEF3O95398 923 aa14.2□□□□□ -0.14
CLCN3P1-201ENST00000423965 YEATS2Q9ULM3 1422 aa14.18□□□□□ -0.14
CLCN3P1-201ENST00000423965 RIMS1Q86UR5 1692 aaKnown RBP14.15□□□□□ -0.14
CLCN3P1-201ENST00000423965 UGGT2Q9NYU1 1516 aa14.14□□□□□ -0.15
CLCN3P1-201ENST00000423965 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
CLCN3P1-201ENST00000423965 IQSEC2Q5JU85 1478 aa14.12□□□□□ -0.15
CLCN3P1-201ENST00000423965 NEO1Q92859 1461 aa14.11□□□□□ -0.15
CLCN3P1-201ENST00000423965 KIAA0556O60303 1618 aa14.08□□□□□ -0.16
CLCN3P1-201ENST00000423965 PTPRTO14522 1441 aa14.07□□□□□ -0.16
CLCN3P1-201ENST00000423965 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
CLCN3P1-201ENST00000423965 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
CLCN3P1-201ENST00000423965 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
CLCN3P1-201ENST00000423965 FKBP8Q14318 412 aa14.05□□□□□ -0.16
CLCN3P1-201ENST00000423965 FANCAO15360 1455 aa14.05□□□□□ -0.16
CLCN3P1-201ENST00000423965 STRCQ7RTU9 1775 aa14.04□□□□□ -0.16
CLCN3P1-201ENST00000423965 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
CLCN3P1-201ENST00000423965 ABCA8O94911 1581 aa14.04□□□□□ -0.16
CLCN3P1-201ENST00000423965 AKNAQ7Z591 1439 aa14.03□□□□□ -0.16
CLCN3P1-201ENST00000423965 ARHGEF40Q8TER5 1519 aa14.03□□□□□ -0.16
CLCN3P1-201ENST00000423965 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.16
CLCN3P1-201ENST00000423965 LTBP4Q8N2S1 1624 aa14.02□□□□□ -0.16
CLCN3P1-201ENST00000423965 FRMPD1Q5SYB0 1578 aa14.02□□□□□ -0.16
CLCN3P1-201ENST00000423965 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.17
CLCN3P1-201ENST00000423965 PREX1Q8TCU6 1659 aa14.01□□□□□ -0.17
CLCN3P1-201ENST00000423965 TTC37Q6PGP7 1564 aa14□□□□□ -0.17
CLCN3P1-201ENST00000423965 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
CLCN3P1-201ENST00000423965 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
CLCN3P1-201ENST00000423965 FHOD3Q2V2M9 1422 aa13.99□□□□□ -0.17
CLCN3P1-201ENST00000423965 MLECQ14165 292 aa13.99□□□□□ -0.17
CLCN3P1-201ENST00000423965 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
CLCN3P1-201ENST00000423965 UBAP1LF5GYI3 381 aa13.98□□□□□ -0.17
CLCN3P1-201ENST00000423965 UHRF1BP1Q6BDS2 1440 aa13.98□□□□□ -0.17
CLCN3P1-201ENST00000423965 ATP10BO94823 1461 aa13.97□□□□□ -0.17
CLCN3P1-201ENST00000423965 CEBPAP49715 358 aaPredicted RBP13.96□□□□□ -0.17
CLCN3P1-201ENST00000423965 MAGI2Q86UL8 1455 aa13.95□□□□□ -0.18
CLCN3P1-201ENST00000423965 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
CLCN3P1-201ENST00000423965 FER1L4A9Z1Z3 1794 aa13.94□□□□□ -0.18
CLCN3P1-201ENST00000423965 EFCAB5A4FU69 1503 aa13.92□□□□□ -0.18
CLCN3P1-201ENST00000423965 SUPT5HO00267 1087 aaKnown RBP13.92□□□□□ -0.18
CLCN3P1-201ENST00000423965 ARHGEF12Q9NZN5 1544 aa13.91□□□□□ -0.18
CLCN3P1-201ENST00000423965 RICTORQ6R327 1708 aa13.91□□□□□ -0.18
CLCN3P1-201ENST00000423965 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
CLCN3P1-201ENST00000423965 ZFYVE16Q7Z3T8 1539 aa13.9□□□□□ -0.18
CLCN3P1-201ENST00000423965 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
CLCN3P1-201ENST00000423965 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.19
CLCN3P1-201ENST00000423965 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
CLCN3P1-201ENST00000423965 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
CLCN3P1-201ENST00000423965 HSPA1LP34931 641 aa13.87□□□□□ -0.19
CLCN3P1-201ENST00000423965 POTEHQ6S545 545 aa13.87□□□□□ -0.19
CLCN3P1-201ENST00000423965 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
CLCN3P1-201ENST00000423965 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
CLCN3P1-201ENST00000423965 PROM2Q8N271 834 aa13.85□□□□□ -0.19
CLCN3P1-201ENST00000423965 ATP10AO60312 1499 aa13.85□□□□□ -0.19
CLCN3P1-201ENST00000423965 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
CLCN3P1-201ENST00000423965 ZNF335Q9H4Z2 1342 aaPredicted RBP13.83□□□□□ -0.2
CLCN3P1-201ENST00000423965 CFAP74Q9C0B2 1584 aa13.82□□□□□ -0.2
CLCN3P1-201ENST00000423965 C9orf84Q5VXU9 1444 aa13.81□□□□□ -0.2
CLCN3P1-201ENST00000423965 TRAPPC8Q9Y2L5 1435 aa13.81□□□□□ -0.2
CLCN3P1-201ENST00000423965 TOM1O60784 492 aa13.81□□□□□ -0.2
CLCN3P1-201ENST00000423965 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLCN3P1-201ENST00000423965 HECW1Q76N89 1606 aa13.8□□□□□ -0.2
CLCN3P1-201ENST00000423965 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
CLCN3P1-201ENST00000423965 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
CLCN3P1-201ENST00000423965 PKD2Q13563 968 aa13.77□□□□□ -0.21
CLCN3P1-201ENST00000423965 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
CLCN3P1-201ENST00000423965 ESF1Q9H501 851 aaKnown RBP13.76□□□□□ -0.21
CLCN3P1-201ENST00000423965 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
CLCN3P1-201ENST00000423965 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
CLCN3P1-201ENST00000423965 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
CLCN3P1-201ENST00000423965 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
CLCN3P1-201ENST00000423965 CAMSAP1Q5T5Y3 1602 aa13.72□□□□□ -0.21
CLCN3P1-201ENST00000423965 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLCN3P1-201ENST00000423965 C3P01024 1663 aa13.7□□□□□ -0.22
CLCN3P1-201ENST00000423965 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
CLCN3P1-201ENST00000423965 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
CLCN3P1-201ENST00000423965 RAPGEF6Q8TEU7 1601 aa13.69□□□□□ -0.22
CLCN3P1-201ENST00000423965 PLCH2O75038 1416 aa13.68□□□□□ -0.22
CLCN3P1-201ENST00000423965 NPATQ14207 1427 aa13.68□□□□□ -0.22
CLCN3P1-201ENST00000423965 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
CLCN3P1-201ENST00000423965 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
CLCN3P1-201ENST00000423965 PLA2R1Q13018 1463 aa13.67□□□□□ -0.22
CLCN3P1-201ENST00000423965 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
CLCN3P1-201ENST00000423965 AGLP35573 1532 aa13.65□□□□□ -0.22
CLCN3P1-201ENST00000423965 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
CLCN3P1-201ENST00000423965 REREQ9P2R6 1566 aa13.64□□□□□ -0.23
CLCN3P1-201ENST00000423965 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms