RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 PEG3Q9GZU2 1588 aa11.15□□□□□ -0.63
CHD7-201ENST00000423902 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.63
CHD7-201ENST00000423902 POLA1P09884 1462 aaPredicted RBP11.14□□□□□ -0.63
CHD7-201ENST00000423902 HECW1Q76N89 1606 aa11.14□□□□□ -0.63
CHD7-201ENST00000423902 DCAF11Q8TEB1 546 aa11.14□□□□□ -0.63
CHD7-201ENST00000423902 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
CHD7-201ENST00000423902 CCDC9Q9Y3X0 531 aaKnown RBP11.13□□□□□ -0.63
CHD7-201ENST00000423902 STK26Q9P289 416 aa11.13□□□□□ -0.63
CHD7-201ENST00000423902 HDGFL2Q7Z4V5 671 aaPredicted RBP11.13□□□□□ -0.63
CHD7-201ENST00000423902 TMF1P82094 1093 aa11.12□□□□□ -0.63
CHD7-201ENST00000423902 KIF21BO75037 1637 aa11.12□□□□□ -0.63
CHD7-201ENST00000423902 EFCAB5A4FU69 1503 aa11.12□□□□□ -0.63
CHD7-201ENST00000423902 IQGAP2Q13576 1575 aa11.11□□□□□ -0.63
CHD7-201ENST00000423902 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHD7-201ENST00000423902 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
CHD7-201ENST00000423902 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
CHD7-201ENST00000423902 CFAP65Q6ZU64 1925 aaKnown RBP11.09□□□□□ -0.63
CHD7-201ENST00000423902 CSB-PGBD3P0DP91 1061 aa11.09□□□□□ -0.63
CHD7-201ENST00000423902 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
CHD7-201ENST00000423902 IGF1RP08069 1367 aa11.09□□□□□ -0.63
CHD7-201ENST00000423902 PKD2Q13563 968 aa11.09□□□□□ -0.63
CHD7-201ENST00000423902 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
CHD7-201ENST00000423902 FOXD1Q16676 465 aa11.08□□□□□ -0.64
CHD7-201ENST00000423902 PLEKHH2Q8IVE3 1493 aa11.08□□□□□ -0.64
CHD7-201ENST00000423902 TMX4Q9H1E5 349 aaPredicted RBP11.07□□□□□ -0.64
CHD7-201ENST00000423902 SAFB2Q14151 953 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHD7-201ENST00000423902 CTTNBP2Q8WZ74 1663 aa11.05□□□□□ -0.64
CHD7-201ENST00000423902 DDX10Q13206 875 aaKnown RBP11.05□□□□□ -0.64
CHD7-201ENST00000423902 ATF3P18847 181 aa11.05□□□□□ -0.64
CHD7-201ENST00000423902 NGDNQ8NEJ9 315 aaKnown RBP11.05□□□□□ -0.64
CHD7-201ENST00000423902 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
CHD7-201ENST00000423902 FAM9BQ8IZU0 186 aa11.05□□□□□ -0.64
CHD7-201ENST00000423902 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
CHD7-201ENST00000423902 ABCA10Q8WWZ4 1543 aa11.03□□□□□ -0.64
CHD7-201ENST00000423902 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
CHD7-201ENST00000423902 ROCK2O75116 1388 aaKnown RBP11.03□□□□□ -0.64
CHD7-201ENST00000423902 EVA1CP58658 441 aa11.02□□□□□ -0.64
CHD7-201ENST00000423902 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.64
CHD7-201ENST00000423902 DCAF8L1A6NGE4 600 aa11.02□□□□□ -0.65
CHD7-201ENST00000423902 SOX12O15370 315 aa11.02□□□□□ -0.65
CHD7-201ENST00000423902 MRS2Q9HD23 443 aa11.02□□□□□ -0.65
CHD7-201ENST00000423902 RTF1Q92541 710 aaKnown RBP11.01□□□□□ -0.65
CHD7-201ENST00000423902 CCDC144AA2RUR9 1427 aa11.01□□□□□ -0.65
CHD7-201ENST00000423902 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
CHD7-201ENST00000423902 KIAA0586Q9BVV6 1533 aa11.01□□□□□ -0.65
CHD7-201ENST00000423902 KIF14Q15058 1648 aa11□□□□□ -0.65
CHD7-201ENST00000423902 GRIN2AQ12879 1464 aa11□□□□□ -0.65
CHD7-201ENST00000423902 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
CHD7-201ENST00000423902 MPHOSPH9Q99550 1183 aa11□□□□□ -0.65
CHD7-201ENST00000423902 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
CHD7-201ENST00000423902 PHF23Q9BUL5 403 aaPredicted RBP10.99□□□□□ -0.65
CHD7-201ENST00000423902 UPF2Q9HAU5 1272 aaKnown RBP10.99□□□□□ -0.65
CHD7-201ENST00000423902 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
CHD7-201ENST00000423902 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
CHD7-201ENST00000423902 TSPOAP1O95153 1857 aa10.99□□□□□ -0.65
CHD7-201ENST00000423902 TIMELESSQ9UNS1 1208 aa10.98□□□□□ -0.65
CHD7-201ENST00000423902 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHD7-201ENST00000423902 U2SURPO15042 1029 aaKnown RBP10.98□□□□□ -0.65
CHD7-201ENST00000423902 MORC1Q86VD1 984 aa10.98□□□□□ -0.65
CHD7-201ENST00000423902 THEMISQ8N1K5 641 aaPredicted RBP10.97□□□□□ -0.65
CHD7-201ENST00000423902 CASKIN1Q8WXD9 1431 aa10.97□□□□□ -0.65
CHD7-201ENST00000423902 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
CHD7-201ENST00000423902 TNNT2P45379 298 aaPredicted RBP10.97□□□□□ -0.65
CHD7-201ENST00000423902 TEX14Q8IWB6 1497 aa10.97□□□□□ -0.65
CHD7-201ENST00000423902 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
CHD7-201ENST00000423902 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
CHD7-201ENST00000423902 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.66
CHD7-201ENST00000423902 PSME1Q06323 249 aa10.96□□□□□ -0.66
CHD7-201ENST00000423902 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
CHD7-201ENST00000423902 KANK4Q5T7N3 995 aaPredicted RBP10.95□□□□□ -0.66
CHD7-201ENST00000423902 DMRT2Q9Y5R5 561 aa10.95□□□□□ -0.66
CHD7-201ENST00000423902 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
CHD7-201ENST00000423902 CD109Q6YHK3 1445 aa10.94□□□□□ -0.66
CHD7-201ENST00000423902 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
CHD7-201ENST00000423902 KIF15Q9NS87 1388 aa10.94□□□□□ -0.66
CHD7-201ENST00000423902 NUTM2DQ5VT03 806 aaPredicted RBP10.93□□□□□ -0.66
CHD7-201ENST00000423902 EIF5BO60841 1220 aaKnown RBP10.92□□□□□ -0.66
CHD7-201ENST00000423902 WDR97A6NE52 1622 aa10.92□□□□□ -0.66
CHD7-201ENST00000423902 AMPHP49418 695 aa10.92□□□□□ -0.66
CHD7-201ENST00000423902 FTSJ3Q8IY81 847 aaKnown RBP10.92□□□□□ -0.66
CHD7-201ENST00000423902 ITSN2Q9NZM3 1697 aa10.92□□□□□ -0.66
CHD7-201ENST00000423902 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
CHD7-201ENST00000423902 PLB1Q6P1J6 1458 aa10.92□□□□□ -0.66
CHD7-201ENST00000423902 EVC2Q86UK5 1308 aa10.91□□□□□ -0.66
CHD7-201ENST00000423902 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
CHD7-201ENST00000423902 MS4A1P11836 297 aa10.9□□□□□ -0.66
CHD7-201ENST00000423902 EIF4G3O43432 1585 aaKnown RBP10.9□□□□□ -0.66
CHD7-201ENST00000423902 STAC3Q96MF2 364 aa10.9□□□□□ -0.67
CHD7-201ENST00000423902 WDR62O43379 1518 aa10.89□□□□□ -0.67
CHD7-201ENST00000423902 EPRSP07814 1512 aaKnown RBP10.89□□□□□ -0.67
CHD7-201ENST00000423902 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
CHD7-201ENST00000423902 HIRIP3Q9BW71 556 aaPredicted RBP10.89□□□□□ -0.67
CHD7-201ENST00000423902 RAB3GAP2Q9H2M9 1393 aa10.89□□□□□ -0.67
CHD7-201ENST00000423902 SF3B2Q13435 895 aaKnown RBP10.88□□□□□ -0.67
CHD7-201ENST00000423902 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
CHD7-201ENST00000423902 TROQ12816 1431 aaPredicted RBP10.88□□□□□ -0.67
CHD7-201ENST00000423902 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
CHD7-201ENST00000423902 TXNDC2Q86VQ3 553 aa10.87□□□□□ -0.67
CHD7-201ENST00000423902 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
CHD7-201ENST00000423902 CASC1Q6TDU7 716 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms