RNA–Protein interactions for RNA: ENST00000423670.1

SCYL3-204, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-204ENST00000423670 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
SCYL3-204ENST00000423670 NEUROD1Q13562 356 aa13.41□□□□□ -0.26
SCYL3-204ENST00000423670 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
SCYL3-204ENST00000423670 CFDP1Q9UEE9 299 aaPredicted RBP13.41□□□□□ -0.26
SCYL3-204ENST00000423670 DENND4BO75064 1496 aaPredicted RBP13.41□□□□□ -0.26
SCYL3-204ENST00000423670 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
SCYL3-204ENST00000423670 CDC42BPAQ5VT25 1732 aa13.4□□□□□ -0.26
SCYL3-204ENST00000423670 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
SCYL3-204ENST00000423670 ZNF777Q9ULD5 760 aaPredicted RBP13.36□□□□□ -0.27
SCYL3-204ENST00000423670 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
SCYL3-204ENST00000423670 NCOA1Q15788 1441 aa13.33□□□□□ -0.28
SCYL3-204ENST00000423670 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
SCYL3-204ENST00000423670 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
SCYL3-204ENST00000423670 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
SCYL3-204ENST00000423670 PPP1R15AO75807 674 aaPredicted RBP13.32□□□□□ -0.28
SCYL3-204ENST00000423670 MPHOSPH9Q99550 1183 aa13.31□□□□□ -0.28
SCYL3-204ENST00000423670 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
SCYL3-204ENST00000423670 ADGRL2O95490 1459 aa13.31□□□□□ -0.28
SCYL3-204ENST00000423670 ADGBQ8N7X0 1667 aa13.3□□□□□ -0.28
SCYL3-204ENST00000423670 MIER1Q8N108 512 aa13.3□□□□□ -0.28
SCYL3-204ENST00000423670 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
SCYL3-204ENST00000423670 KDM5BQ9UGL1 1544 aa13.3□□□□□ -0.28
SCYL3-204ENST00000423670 FOXD1Q16676 465 aa13.29□□□□□ -0.28
SCYL3-204ENST00000423670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCYL3-204ENST00000423670 UHRF1BP1LA0JNW5 1464 aa13.28□□□□□ -0.28
SCYL3-204ENST00000423670 MBD5Q9P267 1494 aa13.28□□□□□ -0.28
SCYL3-204ENST00000423670 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
SCYL3-204ENST00000423670 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
SCYL3-204ENST00000423670 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.28
SCYL3-204ENST00000423670 HNRNPMP52272 730 aaKnown RBP eCLIP13.27□□□□□ -0.28
SCYL3-204ENST00000423670 TONSLQ96HA7 1378 aa13.26□□□□□ -0.29
SCYL3-204ENST00000423670 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
SCYL3-204ENST00000423670 SHANK2Q9UPX8 1470 aa13.25□□□□□ -0.29
SCYL3-204ENST00000423670 ANKRD30AQ9BXX3 1397 aa13.25□□□□□ -0.29
SCYL3-204ENST00000423670 PZPP20742 1482 aa13.25□□□□□ -0.29
SCYL3-204ENST00000423670 KCNH8Q96L42 1107 aa13.24□□□□□ -0.29
SCYL3-204ENST00000423670 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
SCYL3-204ENST00000423670 ANKRD30BQ9BXX2 1392 aa13.24□□□□□ -0.29
SCYL3-204ENST00000423670 ANKRD50Q9ULJ7 1429 aa13.22□□□□□ -0.29
SCYL3-204ENST00000423670 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
SCYL3-204ENST00000423670 ARHGAP5Q13017 1502 aa13.21□□□□□ -0.3
SCYL3-204ENST00000423670 SYCP2Q9BX26 1530 aa13.2□□□□□ -0.3
SCYL3-204ENST00000423670 MYO5CQ9NQX4 1742 aa13.2□□□□□ -0.3
SCYL3-204ENST00000423670 CCDC141Q6ZP82 1450 aa13.2□□□□□ -0.3
SCYL3-204ENST00000423670 TSPY4P0CV99 314 aa13.2□□□□□ -0.3
SCYL3-204ENST00000423670 TSPY10P0CW01 314 aa13.2□□□□□ -0.3
SCYL3-204ENST00000423670 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
SCYL3-204ENST00000423670 ACIN1Q9UKV3 1341 aaKnown RBP13.19□□□□□ -0.3
SCYL3-204ENST00000423670 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
SCYL3-204ENST00000423670 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
SCYL3-204ENST00000423670 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
SCYL3-204ENST00000423670 PLCH2O75038 1416 aa13.17□□□□□ -0.3
SCYL3-204ENST00000423670 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
SCYL3-204ENST00000423670 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
SCYL3-204ENST00000423670 KIAA1107Q9UPP5 1409 aa13.16□□□□□ -0.3
SCYL3-204ENST00000423670 RSPH4AQ5TD94 716 aa13.16□□□□□ -0.3
SCYL3-204ENST00000423670 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.31
SCYL3-204ENST00000423670 PKD2Q13563 968 aa13.14□□□□□ -0.31
SCYL3-204ENST00000423670 MAST1Q9Y2H9 1570 aa13.14□□□□□ -0.31
SCYL3-204ENST00000423670 NUP155O75694 1391 aa13.14□□□□□ -0.31
SCYL3-204ENST00000423670 KDM5DQ9BY66 1539 aa13.13□□□□□ -0.31
SCYL3-204ENST00000423670 WDR7Q9Y4E6 1490 aa13.13□□□□□ -0.31
SCYL3-204ENST00000423670 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
SCYL3-204ENST00000423670 ABCC1P33527 1531 aa13.11□□□□□ -0.31
SCYL3-204ENST00000423670 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
SCYL3-204ENST00000423670 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
SCYL3-204ENST00000423670 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
SCYL3-204ENST00000423670 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
SCYL3-204ENST00000423670 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
SCYL3-204ENST00000423670 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
SCYL3-204ENST00000423670 ASXL2Q76L83 1435 aa13.08□□□□□ -0.31
SCYL3-204ENST00000423670 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.32
SCYL3-204ENST00000423670 ABCA9Q8IUA7 1624 aa13.07□□□□□ -0.32
SCYL3-204ENST00000423670 FAM135AQ9P2D6 1515 aa13.06□□□□□ -0.32
SCYL3-204ENST00000423670 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
SCYL3-204ENST00000423670 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
SCYL3-204ENST00000423670 UNC13BO14795 1591 aa13.05□□□□□ -0.32
SCYL3-204ENST00000423670 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
SCYL3-204ENST00000423670 FANCAO15360 1455 aa13.03□□□□□ -0.32
SCYL3-204ENST00000423670 DUOX2Q9NRD8 1548 aa13.03□□□□□ -0.32
SCYL3-204ENST00000423670 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
SCYL3-204ENST00000423670 PLA2R1Q13018 1463 aa13.01□□□□□ -0.33
SCYL3-204ENST00000423670 ZFYVE16Q7Z3T8 1539 aa13.01□□□□□ -0.33
SCYL3-204ENST00000423670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCYL3-204ENST00000423670 ERBINQ96RT1 1412 aa13.01□□□□□ -0.33
SCYL3-204ENST00000423670 MAGI2Q86UL8 1455 aa13.01□□□□□ -0.33
SCYL3-204ENST00000423670 IQGAP3Q86VI3 1631 aa13□□□□□ -0.33
SCYL3-204ENST00000423670 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
SCYL3-204ENST00000423670 WASHC2AQ641Q2 1341 aa13□□□□□ -0.33
SCYL3-204ENST00000423670 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
SCYL3-204ENST00000423670 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
SCYL3-204ENST00000423670 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
SCYL3-204ENST00000423670 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
SCYL3-204ENST00000423670 ADGRL1O94910 1474 aa12.98□□□□□ -0.33
SCYL3-204ENST00000423670 SCAPERQ9BY12 1400 aa12.98□□□□□ -0.33
SCYL3-204ENST00000423670 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
SCYL3-204ENST00000423670 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCYL3-204ENST00000423670 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.34
SCYL3-204ENST00000423670 ATP7AQ04656 1500 aa12.96□□□□□ -0.34
SCYL3-204ENST00000423670 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms