RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 DNMT1P26358 1616 aaKnown RBP13.09□□□□□ -0.31
SNX20-203ENST00000423026 ROCK1Q13464 1354 aa13.08□□□□□ -0.32
SNX20-203ENST00000423026 TIMELESSQ9UNS1 1208 aa13.08□□□□□ -0.32
SNX20-203ENST00000423026 ZNF644Q9H582 1327 aaPredicted RBP13.08□□□□□ -0.32
SNX20-203ENST00000423026 ABCC5O15440 1437 aa13.07□□□□□ -0.32
SNX20-203ENST00000423026 CAMSAP2Q08AD1 1489 aa13.07□□□□□ -0.32
SNX20-203ENST00000423026 ZNF777Q9ULD5 760 aaPredicted RBP13.07□□□□□ -0.32
SNX20-203ENST00000423026 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
SNX20-203ENST00000423026 ERCC6L2Q5T890 1561 aa13.05□□□□□ -0.32
SNX20-203ENST00000423026 ABCC10Q5T3U5 1492 aa13.05□□□□□ -0.32
SNX20-203ENST00000423026 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
SNX20-203ENST00000423026 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
SNX20-203ENST00000423026 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
SNX20-203ENST00000423026 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
SNX20-203ENST00000423026 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
SNX20-203ENST00000423026 ADGBQ8N7X0 1667 aa13□□□□□ -0.33
SNX20-203ENST00000423026 UHRF1BP1LA0JNW5 1464 aa13□□□□□ -0.33
SNX20-203ENST00000423026 CROCC2H7BZ55 1655 aa12.98□□□□□ -0.33
SNX20-203ENST00000423026 KDM6BO15054 1643 aa12.98□□□□□ -0.33
SNX20-203ENST00000423026 TONSLQ96HA7 1378 aa12.98□□□□□ -0.33
SNX20-203ENST00000423026 ANKRD30AQ9BXX3 1397 aa12.98□□□□□ -0.33
SNX20-203ENST00000423026 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
SNX20-203ENST00000423026 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
SNX20-203ENST00000423026 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
SNX20-203ENST00000423026 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
SNX20-203ENST00000423026 NCOA1Q15788 1441 aa12.97□□□□□ -0.33
SNX20-203ENST00000423026 PREX2Q70Z35 1606 aa12.96□□□□□ -0.33
SNX20-203ENST00000423026 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
SNX20-203ENST00000423026 ZCCHC11Q5TAX3 1644 aaKnown RBP12.96□□□□□ -0.34
SNX20-203ENST00000423026 SHANK2Q9UPX8 1470 aa12.95□□□□□ -0.34
SNX20-203ENST00000423026 CDC42BPBQ9Y5S2 1711 aa12.95□□□□□ -0.34
SNX20-203ENST00000423026 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
SNX20-203ENST00000423026 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
SNX20-203ENST00000423026 KDM5BQ9UGL1 1544 aa12.95□□□□□ -0.34
SNX20-203ENST00000423026 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
SNX20-203ENST00000423026 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
SNX20-203ENST00000423026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNX20-203ENST00000423026 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
SNX20-203ENST00000423026 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
SNX20-203ENST00000423026 C9orf84Q5VXU9 1444 aa12.93□□□□□ -0.34
SNX20-203ENST00000423026 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNX20-203ENST00000423026 ARHGAP5Q13017 1502 aa12.92□□□□□ -0.34
SNX20-203ENST00000423026 TTC37Q6PGP7 1564 aa12.92□□□□□ -0.34
SNX20-203ENST00000423026 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
SNX20-203ENST00000423026 SAMD9LQ8IVG5 1584 aa12.91□□□□□ -0.34
SNX20-203ENST00000423026 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
SNX20-203ENST00000423026 ANKRD50Q9ULJ7 1429 aa12.9□□□□□ -0.34
SNX20-203ENST00000423026 PLEKHH2Q8IVE3 1493 aa12.9□□□□□ -0.34
SNX20-203ENST00000423026 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
SNX20-203ENST00000423026 DENND4BO75064 1496 aaPredicted RBP12.9□□□□□ -0.34
SNX20-203ENST00000423026 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
SNX20-203ENST00000423026 PLCH2O75038 1416 aa12.87□□□□□ -0.35
SNX20-203ENST00000423026 KIAA1107Q9UPP5 1409 aa12.87□□□□□ -0.35
SNX20-203ENST00000423026 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
SNX20-203ENST00000423026 SYCP2Q9BX26 1530 aa12.86□□□□□ -0.35
SNX20-203ENST00000423026 FOXD1Q16676 465 aa12.86□□□□□ -0.35
SNX20-203ENST00000423026 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
SNX20-203ENST00000423026 PZPP20742 1482 aa12.85□□□□□ -0.35
SNX20-203ENST00000423026 MIER1Q8N108 512 aa12.84□□□□□ -0.35
SNX20-203ENST00000423026 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNX20-203ENST00000423026 MAST1Q9Y2H9 1570 aa12.84□□□□□ -0.35
SNX20-203ENST00000423026 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
SNX20-203ENST00000423026 NUP155O75694 1391 aa12.82□□□□□ -0.36
SNX20-203ENST00000423026 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
SNX20-203ENST00000423026 ARAP3Q8WWN8 1544 aa12.82□□□□□ -0.36
SNX20-203ENST00000423026 PKD2Q13563 968 aa12.81□□□□□ -0.36
SNX20-203ENST00000423026 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
SNX20-203ENST00000423026 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
SNX20-203ENST00000423026 ABCC1P33527 1531 aa12.79□□□□□ -0.36
SNX20-203ENST00000423026 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
SNX20-203ENST00000423026 ARHGEF12Q9NZN5 1544 aa12.78□□□□□ -0.36
SNX20-203ENST00000423026 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
SNX20-203ENST00000423026 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.36
SNX20-203ENST00000423026 DUOX2Q9NRD8 1548 aa12.76□□□□□ -0.37
SNX20-203ENST00000423026 FANCAO15360 1455 aa12.74□□□□□ -0.37
SNX20-203ENST00000423026 SPAG9O60271 1321 aaKnown RBP12.74□□□□□ -0.37
SNX20-203ENST00000423026 TRAPPC8Q9Y2L5 1435 aa12.74□□□□□ -0.37
SNX20-203ENST00000423026 HIRIP3Q9BW71 556 aaPredicted RBP12.74□□□□□ -0.37
SNX20-203ENST00000423026 TEX14Q8IWB6 1497 aa12.73□□□□□ -0.37
SNX20-203ENST00000423026 RTEL1-TNFRSF6BF6WH68 1400 aa12.73□□□□□ -0.37
SNX20-203ENST00000423026 ERBINQ96RT1 1412 aa12.73□□□□□ -0.37
SNX20-203ENST00000423026 UNC13BO14795 1591 aa12.73□□□□□ -0.37
SNX20-203ENST00000423026 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
SNX20-203ENST00000423026 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
SNX20-203ENST00000423026 EIF4G2P78344 907 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNX20-203ENST00000423026 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
SNX20-203ENST00000423026 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
SNX20-203ENST00000423026 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
SNX20-203ENST00000423026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNX20-203ENST00000423026 AFAP1Q8N556 730 aa12.7□□□□□ -0.38
SNX20-203ENST00000423026 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
SNX20-203ENST00000423026 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
SNX20-203ENST00000423026 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
SNX20-203ENST00000423026 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
SNX20-203ENST00000423026 SCAPERQ9BY12 1400 aa12.68□□□□□ -0.38
SNX20-203ENST00000423026 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
SNX20-203ENST00000423026 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
SNX20-203ENST00000423026 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
SNX20-203ENST00000423026 CFAP74Q9C0B2 1584 aa12.67□□□□□ -0.38
SNX20-203ENST00000423026 CD109Q6YHK3 1445 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms