RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 CFDP1Q9UEE9 299 aaPredicted RBP27.82■■■□□ 2.04
RBFOX1-204ENST00000422070 ABCC5O15440 1437 aa27.81■■■□□ 2.04
RBFOX1-204ENST00000422070 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
RBFOX1-204ENST00000422070 PREX2Q70Z35 1606 aa27.78■■■□□ 2.04
RBFOX1-204ENST00000422070 CROCC2H7BZ55 1655 aa27.76■■■□□ 2.03
RBFOX1-204ENST00000422070 ACIN1Q9UKV3 1341 aaKnown RBP27.75■■■□□ 2.03
RBFOX1-204ENST00000422070 ZNF644Q9H582 1327 aaPredicted RBP27.74■■■□□ 2.03
RBFOX1-204ENST00000422070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.72■■■□□ 2.03
RBFOX1-204ENST00000422070 ADGRL2O95490 1459 aa27.71■■■□□ 2.03
RBFOX1-204ENST00000422070 ADGBQ8N7X0 1667 aa27.71■■■□□ 2.03
RBFOX1-204ENST00000422070 SHANK2Q9UPX8 1470 aa27.71■■■□□ 2.03
RBFOX1-204ENST00000422070 TTC37Q6PGP7 1564 aa27.69■■■□□ 2.02
RBFOX1-204ENST00000422070 CDC42BPBQ9Y5S2 1711 aa27.69■■■□□ 2.02
RBFOX1-204ENST00000422070 ARHGEF5Q12774 1597 aa27.69■■■□□ 2.02
RBFOX1-204ENST00000422070 MYO5CQ9NQX4 1742 aa27.65■■■□□ 2.02
RBFOX1-204ENST00000422070 CHIC2Q9UKJ5 165 aa27.65■■■□□ 2.02
RBFOX1-204ENST00000422070 RRP7BPQ9NSQ0 103 aa27.63■■■□□ 2.01
RBFOX1-204ENST00000422070 SAMD9LQ8IVG5 1584 aa27.63■■■□□ 2.01
RBFOX1-204ENST00000422070 NCOA1Q15788 1441 aa27.61■■■□□ 2.01
RBFOX1-204ENST00000422070 KDM6BO15054 1643 aa27.6■■■□□ 2.01
RBFOX1-204ENST00000422070 MBD5Q9P267 1494 aa27.6■■■□□ 2.01
RBFOX1-204ENST00000422070 ZNF777Q9ULD5 760 aaPredicted RBP27.59■■■□□ 2.01
RBFOX1-204ENST00000422070 ARAP3Q8WWN8 1544 aa27.58■■■□□ 2.01
RBFOX1-204ENST00000422070 PLEKHH2Q8IVE3 1493 aa27.58■■■□□ 2.01
RBFOX1-204ENST00000422070 WDR7Q9Y4E6 1490 aa27.57■■■□□ 2
RBFOX1-204ENST00000422070 ARHGAP5Q13017 1502 aa27.56■■■□□ 2
RBFOX1-204ENST00000422070 ANKRD30AQ9BXX3 1397 aa27.56■■■□□ 2
RBFOX1-204ENST00000422070 RSPH4AQ5TD94 716 aa27.56■■■□□ 2
RBFOX1-204ENST00000422070 TIMELESSQ9UNS1 1208 aa27.56■■■□□ 2
RBFOX1-204ENST00000422070 CCDC141Q6ZP82 1450 aa27.55■■■□□ 2
RBFOX1-204ENST00000422070 PLCH2O75038 1416 aa27.55■■■□□ 2
RBFOX1-204ENST00000422070 KIAA1107Q9UPP5 1409 aa27.55■■■□□ 2
RBFOX1-204ENST00000422070 C9orf84Q5VXU9 1444 aa27.54■■■□□ 2
RBFOX1-204ENST00000422070 MAST1Q9Y2H9 1570 aa27.51■■□□□ 1.99
RBFOX1-204ENST00000422070 SYCP2Q9BX26 1530 aa27.48■■□□□ 1.99
RBFOX1-204ENST00000422070 ABCA9Q8IUA7 1624 aa27.47■■□□□ 1.99
RBFOX1-204ENST00000422070 DENND4BO75064 1496 aaPredicted RBP27.47■■□□□ 1.99
RBFOX1-204ENST00000422070 TSPY4P0CV99 314 aa27.45■■□□□ 1.98
RBFOX1-204ENST00000422070 TSPY10P0CW01 314 aa27.45■■□□□ 1.98
RBFOX1-204ENST00000422070 KCNH8Q96L42 1107 aa27.44■■□□□ 1.98
RBFOX1-204ENST00000422070 ASXL2Q76L83 1435 aa27.43■■□□□ 1.98
RBFOX1-204ENST00000422070 ZNF316A6NFI3 1004 aaPredicted RBP27.43■■□□□ 1.98
RBFOX1-204ENST00000422070 ABCC1P33527 1531 aa27.42■■□□□ 1.98
RBFOX1-204ENST00000422070 ANKRD50Q9ULJ7 1429 aa27.41■■□□□ 1.98
RBFOX1-204ENST00000422070 HNRNPMP52272 730 aaKnown RBP eCLIP27.41■■□□□ 1.98
RBFOX1-204ENST00000422070 EFCAB2Q5VUJ9 269 aa27.4■■□□□ 1.98
RBFOX1-204ENST00000422070 PLXNC1O60486 1568 aa27.39■■□□□ 1.98
RBFOX1-204ENST00000422070 TRIM52Q96A61 297 aa27.38■■□□□ 1.97
RBFOX1-204ENST00000422070 SIN3AQ96ST3 1273 aa27.38■■□□□ 1.97
RBFOX1-204ENST00000422070 MPHOSPH9Q99550 1183 aa27.37■■□□□ 1.97
RBFOX1-204ENST00000422070 KIF15Q9NS87 1388 aa27.36■■□□□ 1.97
RBFOX1-204ENST00000422070 KDM5DQ9BY66 1539 aa27.35■■□□□ 1.97
RBFOX1-204ENST00000422070 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
RBFOX1-204ENST00000422070 NPM1P06748 294 aaKnown RBP eCLIP27.33■■□□□ 1.97
RBFOX1-204ENST00000422070 PZPP20742 1482 aa27.33■■□□□ 1.97
RBFOX1-204ENST00000422070 NEUROD1Q13562 356 aa27.3■■□□□ 1.96
RBFOX1-204ENST00000422070 TONSLQ96HA7 1378 aa27.27■■□□□ 1.96
RBFOX1-204ENST00000422070 FANCAO15360 1455 aa27.27■■□□□ 1.96
RBFOX1-204ENST00000422070 ANKRD30BQ9BXX2 1392 aa27.25■■□□□ 1.95
RBFOX1-204ENST00000422070 RTEL1-TNFRSF6BF6WH68 1400 aa27.24■■□□□ 1.95
RBFOX1-204ENST00000422070 DUOX2Q9NRD8 1548 aa27.23■■□□□ 1.95
RBFOX1-204ENST00000422070 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
RBFOX1-204ENST00000422070 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
RBFOX1-204ENST00000422070 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
RBFOX1-204ENST00000422070 SLC4A1APQ9BWU0 796 aaKnown RBP27.23■■□□□ 1.95
RBFOX1-204ENST00000422070 PPP1R15AO75807 674 aaPredicted RBP27.22■■□□□ 1.95
RBFOX1-204ENST00000422070 TRAPPC8Q9Y2L5 1435 aa27.22■■□□□ 1.95
RBFOX1-204ENST00000422070 UNC13BO14795 1591 aa27.21■■□□□ 1.95
RBFOX1-204ENST00000422070 CFAP74Q9C0B2 1584 aa27.21■■□□□ 1.95
RBFOX1-204ENST00000422070 ERBINQ96RT1 1412 aa27.2■■□□□ 1.95
RBFOX1-204ENST00000422070 RPRD2Q5VT52 1461 aaKnown RBP27.2■■□□□ 1.94
RBFOX1-204ENST00000422070 DIEXFQ68CQ4 756 aaKnown RBP27.18■■□□□ 1.94
RBFOX1-204ENST00000422070 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
RBFOX1-204ENST00000422070 ADGRL1O94910 1474 aa27.15■■□□□ 1.94
RBFOX1-204ENST00000422070 NUP155O75694 1391 aa27.15■■□□□ 1.94
RBFOX1-204ENST00000422070 INO80Q9ULG1 1556 aaPredicted RBP27.15■■□□□ 1.94
RBFOX1-204ENST00000422070 MAGI2Q86UL8 1455 aa27.14■■□□□ 1.94
RBFOX1-204ENST00000422070 CD109Q6YHK3 1445 aa27.11■■□□□ 1.93
RBFOX1-204ENST00000422070 FAM135AQ9P2D6 1515 aa27.1■■□□□ 1.93
RBFOX1-204ENST00000422070 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
RBFOX1-204ENST00000422070 ATP7AQ04656 1500 aa27.09■■□□□ 1.93
RBFOX1-204ENST00000422070 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
RBFOX1-204ENST00000422070 IQGAP3Q86VI3 1631 aa27.09■■□□□ 1.93
RBFOX1-204ENST00000422070 FOXD1Q16676 465 aa27.08■■□□□ 1.93
RBFOX1-204ENST00000422070 TEX14Q8IWB6 1497 aa27.08■■□□□ 1.92
RBFOX1-204ENST00000422070 GLI2P10070 1586 aa27.06■■□□□ 1.92
RBFOX1-204ENST00000422070 PKD2Q13563 968 aa27.06■■□□□ 1.92
RBFOX1-204ENST00000422070 ZNF518AQ6AHZ1 1483 aa27.05■■□□□ 1.92
RBFOX1-204ENST00000422070 NEO1Q92859 1461 aa27.04■■□□□ 1.92
RBFOX1-204ENST00000422070 AFAP1Q8N556 730 aa27.03■■□□□ 1.92
RBFOX1-204ENST00000422070 MAP3K4Q9Y6R4 1608 aa27.03■■□□□ 1.92
RBFOX1-204ENST00000422070 CYB5RLQ6IPT4 315 aa27.01■■□□□ 1.92
RBFOX1-204ENST00000422070 KDM5CP41229 1560 aa27.01■■□□□ 1.92
RBFOX1-204ENST00000422070 EIF2AK4Q9P2K8 1649 aaKnown RBP27■■□□□ 1.91
RBFOX1-204ENST00000422070 DEPDC5O75140 1603 aa27■■□□□ 1.91
RBFOX1-204ENST00000422070 POGZQ7Z3K3 1410 aa26.98■■□□□ 1.91
RBFOX1-204ENST00000422070 KIDINS220Q9ULH0 1771 aa26.96■■□□□ 1.91
RBFOX1-204ENST00000422070 L3MBTL2Q969R5 705 aa26.95■■□□□ 1.91
RBFOX1-204ENST00000422070 MLH3Q9UHC1 1453 aa26.94■■□□□ 1.9
RBFOX1-204ENST00000422070 ATP10AO60312 1499 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms