RNA–Protein interactions for RNA: ENST00000421836.6

SPOCK3-203, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPOCK3, Length 3,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-203ENST00000421836 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
SPOCK3-203ENST00000421836 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
SPOCK3-203ENST00000421836 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
SPOCK3-203ENST00000421836 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
SPOCK3-203ENST00000421836 FOXD1Q16676 465 aa18.23■□□□□ 0.51
SPOCK3-203ENST00000421836 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
SPOCK3-203ENST00000421836 MYT1LQ9UL68 1186 aa18.21■□□□□ 0.51
SPOCK3-203ENST00000421836 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.51
SPOCK3-203ENST00000421836 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
SPOCK3-203ENST00000421836 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
SPOCK3-203ENST00000421836 UBE2Q2Q8WVN8 375 aa18.18■□□□□ 0.5
SPOCK3-203ENST00000421836 ABCC2Q92887 1545 aa18.18■□□□□ 0.5
SPOCK3-203ENST00000421836 TSPY4P0CV99 314 aa18.14■□□□□ 0.49
SPOCK3-203ENST00000421836 TSPY10P0CW01 314 aa18.14■□□□□ 0.49
SPOCK3-203ENST00000421836 ABCC5O15440 1437 aa18.12■□□□□ 0.49
SPOCK3-203ENST00000421836 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
SPOCK3-203ENST00000421836 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
SPOCK3-203ENST00000421836 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
SPOCK3-203ENST00000421836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPOCK3-203ENST00000421836 NAIPQ13075 1403 aa18.1■□□□□ 0.49
SPOCK3-203ENST00000421836 DAPK1P53355 1430 aa18.09■□□□□ 0.49
SPOCK3-203ENST00000421836 ADCY10Q96PN6 1610 aa18.09■□□□□ 0.49
SPOCK3-203ENST00000421836 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
SPOCK3-203ENST00000421836 ZCCHC11Q5TAX3 1644 aaKnown RBP18.08■□□□□ 0.48
SPOCK3-203ENST00000421836 ABCC10Q5T3U5 1492 aa18.08■□□□□ 0.48
SPOCK3-203ENST00000421836 ARHGAP5Q13017 1502 aa18.07■□□□□ 0.48
SPOCK3-203ENST00000421836 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
SPOCK3-203ENST00000421836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
SPOCK3-203ENST00000421836 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
SPOCK3-203ENST00000421836 EFCAB2Q5VUJ9 269 aa18.04■□□□□ 0.48
SPOCK3-203ENST00000421836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.04■□□□□ 0.48
SPOCK3-203ENST00000421836 KDM5BQ9UGL1 1544 aa18.04■□□□□ 0.48
SPOCK3-203ENST00000421836 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
SPOCK3-203ENST00000421836 HFM1A2PYH4 1435 aa18.03■□□□□ 0.48
SPOCK3-203ENST00000421836 KDM6BO15054 1643 aa18.03■□□□□ 0.48
SPOCK3-203ENST00000421836 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
SPOCK3-203ENST00000421836 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
SPOCK3-203ENST00000421836 HIRIP3Q9BW71 556 aaPredicted RBP18■□□□□ 0.47
SPOCK3-203ENST00000421836 CDC42BPAQ5VT25 1732 aa18■□□□□ 0.47
SPOCK3-203ENST00000421836 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
SPOCK3-203ENST00000421836 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
SPOCK3-203ENST00000421836 WDR7Q9Y4E6 1490 aa17.98■□□□□ 0.47
SPOCK3-203ENST00000421836 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
SPOCK3-203ENST00000421836 CCDC136Q96JN2 1154 aa17.96■□□□□ 0.47
SPOCK3-203ENST00000421836 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
SPOCK3-203ENST00000421836 SYCP2Q9BX26 1530 aa17.96■□□□□ 0.47
SPOCK3-203ENST00000421836 PKNOX2Q96KN3 472 aa17.95■□□□□ 0.46
SPOCK3-203ENST00000421836 NCOA1Q15788 1441 aa17.95■□□□□ 0.46
SPOCK3-203ENST00000421836 RAPGEF3O95398 923 aa17.95■□□□□ 0.46
SPOCK3-203ENST00000421836 ANKRD30AQ9BXX3 1397 aa17.95■□□□□ 0.46
SPOCK3-203ENST00000421836 MAPKBP1O60336 1514 aa17.94■□□□□ 0.46
SPOCK3-203ENST00000421836 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
SPOCK3-203ENST00000421836 TRAPPC8Q9Y2L5 1435 aa17.93■□□□□ 0.46
SPOCK3-203ENST00000421836 KIF15Q9NS87 1388 aa17.93■□□□□ 0.46
SPOCK3-203ENST00000421836 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
SPOCK3-203ENST00000421836 PLCH2O75038 1416 aa17.93■□□□□ 0.46
SPOCK3-203ENST00000421836 ARHGEF12Q9NZN5 1544 aa17.93■□□□□ 0.46
SPOCK3-203ENST00000421836 SAMD9LQ8IVG5 1584 aa17.92■□□□□ 0.46
SPOCK3-203ENST00000421836 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
SPOCK3-203ENST00000421836 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
SPOCK3-203ENST00000421836 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
SPOCK3-203ENST00000421836 ITSN2Q9NZM3 1697 aa17.92■□□□□ 0.46
SPOCK3-203ENST00000421836 PKD2Q13563 968 aa17.91■□□□□ 0.46
SPOCK3-203ENST00000421836 MBD5Q9P267 1494 aa17.91■□□□□ 0.46
SPOCK3-203ENST00000421836 DNMT1P26358 1616 aaKnown RBP17.91■□□□□ 0.46
SPOCK3-203ENST00000421836 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
SPOCK3-203ENST00000421836 NUP155O75694 1391 aa17.91■□□□□ 0.46
SPOCK3-203ENST00000421836 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
SPOCK3-203ENST00000421836 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
SPOCK3-203ENST00000421836 CD109Q6YHK3 1445 aa17.89■□□□□ 0.45
SPOCK3-203ENST00000421836 SCAPERQ9BY12 1400 aa17.88■□□□□ 0.45
SPOCK3-203ENST00000421836 FANCAO15360 1455 aa17.88■□□□□ 0.45
SPOCK3-203ENST00000421836 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
SPOCK3-203ENST00000421836 PREX2Q70Z35 1606 aa17.85■□□□□ 0.45
SPOCK3-203ENST00000421836 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
SPOCK3-203ENST00000421836 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
SPOCK3-203ENST00000421836 TONSLQ96HA7 1378 aa17.84■□□□□ 0.45
SPOCK3-203ENST00000421836 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.45
SPOCK3-203ENST00000421836 MYO5CQ9NQX4 1742 aa17.83■□□□□ 0.44
SPOCK3-203ENST00000421836 CLSPNQ9HAW4 1339 aa17.83■□□□□ 0.44
SPOCK3-203ENST00000421836 KIF3BO15066 747 aa17.83■□□□□ 0.44
SPOCK3-203ENST00000421836 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
SPOCK3-203ENST00000421836 ADGRL1O94910 1474 aa17.81■□□□□ 0.44
SPOCK3-203ENST00000421836 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
SPOCK3-203ENST00000421836 RSPH4AQ5TD94 716 aa17.81■□□□□ 0.44
SPOCK3-203ENST00000421836 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
SPOCK3-203ENST00000421836 PLEKHH2Q8IVE3 1493 aa17.81■□□□□ 0.44
SPOCK3-203ENST00000421836 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
SPOCK3-203ENST00000421836 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
SPOCK3-203ENST00000421836 DENND4BO75064 1496 aaPredicted RBP17.8■□□□□ 0.44
SPOCK3-203ENST00000421836 GGT6Q6P531 493 aa17.8■□□□□ 0.44
SPOCK3-203ENST00000421836 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
SPOCK3-203ENST00000421836 L3MBTL2Q969R5 705 aa17.78■□□□□ 0.44
SPOCK3-203ENST00000421836 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
SPOCK3-203ENST00000421836 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
SPOCK3-203ENST00000421836 GCC2Q8IWJ2 1684 aa17.73■□□□□ 0.43
SPOCK3-203ENST00000421836 KIAA1107Q9UPP5 1409 aa17.73■□□□□ 0.43
SPOCK3-203ENST00000421836 MLECQ14165 292 aa17.73■□□□□ 0.43
SPOCK3-203ENST00000421836 TSPOAP1O95153 1857 aa17.72■□□□□ 0.43
SPOCK3-203ENST00000421836 ADGRL2O95490 1459 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms