RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 CCDC7Q96M83 1385 aa21.93■■□□□ 1.1
TRIM13-204ENST00000420995 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
TRIM13-204ENST00000420995 FAM9BQ8IZU0 186 aa21.93■■□□□ 1.1
TRIM13-204ENST00000420995 PRKRIP1Q9H875 184 aaPredicted RBP21.93■■□□□ 1.1
TRIM13-204ENST00000420995 MIA2Q96PC5 1412 aa21.92■■□□□ 1.1
TRIM13-204ENST00000420995 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
TRIM13-204ENST00000420995 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
TRIM13-204ENST00000420995 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
TRIM13-204ENST00000420995 WDR62O43379 1518 aa21.87■■□□□ 1.09
TRIM13-204ENST00000420995 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
TRIM13-204ENST00000420995 RPRD2Q5VT52 1461 aaKnown RBP21.85■■□□□ 1.09
TRIM13-204ENST00000420995 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
TRIM13-204ENST00000420995 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
TRIM13-204ENST00000420995 DAPK1P53355 1430 aa21.85■■□□□ 1.09
TRIM13-204ENST00000420995 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
TRIM13-204ENST00000420995 KIF7Q2M1P5 1343 aa21.83■■□□□ 1.09
TRIM13-204ENST00000420995 FANCIQ9NVI1 1328 aa21.83■■□□□ 1.09
TRIM13-204ENST00000420995 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.08
TRIM13-204ENST00000420995 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
TRIM13-204ENST00000420995 ABCC5O15440 1437 aa21.81■■□□□ 1.08
TRIM13-204ENST00000420995 ZBED9Q6R2W3 1325 aa21.81■■□□□ 1.08
TRIM13-204ENST00000420995 ERICH6BQ5W0A0 696 aa21.8■■□□□ 1.08
TRIM13-204ENST00000420995 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
TRIM13-204ENST00000420995 SPATA31E1Q6ZUB1 1445 aa21.79■■□□□ 1.08
TRIM13-204ENST00000420995 B4GALNT3Q6L9W6 998 aa21.79■■□□□ 1.08
TRIM13-204ENST00000420995 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
TRIM13-204ENST00000420995 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
TRIM13-204ENST00000420995 CNGB1Q14028 1251 aaPredicted RBP21.76■■□□□ 1.07
TRIM13-204ENST00000420995 DNMT1P26358 1616 aaKnown RBP21.75■■□□□ 1.07
TRIM13-204ENST00000420995 DISP1Q96F81 1524 aa21.75■■□□□ 1.07
TRIM13-204ENST00000420995 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
TRIM13-204ENST00000420995 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
TRIM13-204ENST00000420995 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
TRIM13-204ENST00000420995 KIAA0556O60303 1618 aa21.71■■□□□ 1.07
TRIM13-204ENST00000420995 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
TRIM13-204ENST00000420995 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
TRIM13-204ENST00000420995 POLR3GLQ9BT43 218 aa21.69■■□□□ 1.06
TRIM13-204ENST00000420995 ZNF326Q5BKZ1 582 aaKnown RBP21.68■■□□□ 1.06
TRIM13-204ENST00000420995 PZPP20742 1482 aa21.68■■□□□ 1.06
TRIM13-204ENST00000420995 DHX29Q7Z478 1369 aaKnown RBP21.66■■□□□ 1.06
TRIM13-204ENST00000420995 FBLN2P98095 1184 aa21.66■■□□□ 1.06
TRIM13-204ENST00000420995 POLR1AO95602 1720 aaPredicted RBP21.65■■□□□ 1.06
TRIM13-204ENST00000420995 SENP3-EIF4A1A0A087X0R7 540 aa21.64■■□□□ 1.05
TRIM13-204ENST00000420995 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
TRIM13-204ENST00000420995 USP47Q96K76 1375 aa21.63■■□□□ 1.05
TRIM13-204ENST00000420995 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
TRIM13-204ENST00000420995 CEP170Q5SW79 1584 aa21.63■■□□□ 1.05
TRIM13-204ENST00000420995 CAMSAP2Q08AD1 1489 aa21.62■■□□□ 1.05
TRIM13-204ENST00000420995 MBD5Q9P267 1494 aa21.62■■□□□ 1.05
TRIM13-204ENST00000420995 CFDP1Q9UEE9 299 aaPredicted RBP21.61■■□□□ 1.05
TRIM13-204ENST00000420995 ZNF777Q9ULD5 760 aaPredicted RBP21.61■■□□□ 1.05
TRIM13-204ENST00000420995 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
TRIM13-204ENST00000420995 BCORL1Q5H9F3 1711 aa21.59■■□□□ 1.05
TRIM13-204ENST00000420995 SMG6Q86US8 1419 aaKnown RBP21.59■■□□□ 1.05
TRIM13-204ENST00000420995 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
TRIM13-204ENST00000420995 PKD2Q13563 968 aa21.59■■□□□ 1.05
TRIM13-204ENST00000420995 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
TRIM13-204ENST00000420995 TROQ12816 1431 aaPredicted RBP21.56■■□□□ 1.04
TRIM13-204ENST00000420995 PLB1Q6P1J6 1458 aa21.56■■□□□ 1.04
TRIM13-204ENST00000420995 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
TRIM13-204ENST00000420995 NUDCQ9Y266 331 aa21.56■■□□□ 1.04
TRIM13-204ENST00000420995 GPATCH8Q9UKJ3 1502 aaKnown RBP21.54■■□□□ 1.04
TRIM13-204ENST00000420995 KIF14Q15058 1648 aa21.52■■□□□ 1.04
TRIM13-204ENST00000420995 KDM5CP41229 1560 aa21.51■■□□□ 1.03
TRIM13-204ENST00000420995 JPH4Q96JJ6 628 aa21.5■■□□□ 1.03
TRIM13-204ENST00000420995 ADGRL2O95490 1459 aa21.5■■□□□ 1.03
TRIM13-204ENST00000420995 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
TRIM13-204ENST00000420995 RNF123Q5XPI4 1314 aa21.49■■□□□ 1.03
TRIM13-204ENST00000420995 ANKRD30AQ9BXX3 1397 aa21.48■■□□□ 1.03
TRIM13-204ENST00000420995 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
TRIM13-204ENST00000420995 ANKRD50Q9ULJ7 1429 aa21.48■■□□□ 1.03
TRIM13-204ENST00000420995 CCDC136Q96JN2 1154 aa21.48■■□□□ 1.03
TRIM13-204ENST00000420995 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
TRIM13-204ENST00000420995 TMC1Q8TDI8 760 aa21.47■■□□□ 1.03
TRIM13-204ENST00000420995 CARD11Q9BXL7 1154 aa21.46■■□□□ 1.03
TRIM13-204ENST00000420995 NUP160Q12769 1436 aa21.46■■□□□ 1.03
TRIM13-204ENST00000420995 ARID4BQ4LE39 1312 aaPredicted RBP21.45■■□□□ 1.02
TRIM13-204ENST00000420995 CROCC2H7BZ55 1655 aa21.45■■□□□ 1.02
TRIM13-204ENST00000420995 NUP155O75694 1391 aa21.44■■□□□ 1.02
TRIM13-204ENST00000420995 RALGAPBQ86X10 1494 aa21.44■■□□□ 1.02
TRIM13-204ENST00000420995 KDM2AQ9Y2K7 1162 aa21.43■■□□□ 1.02
TRIM13-204ENST00000420995 UHRF1BP1Q6BDS2 1440 aa21.43■■□□□ 1.02
TRIM13-204ENST00000420995 NOP58Q9Y2X3 529 aaKnown RBP21.42■■□□□ 1.02
TRIM13-204ENST00000420995 PAK3O75914 559 aaPredicted RBP21.42■■□□□ 1.02
TRIM13-204ENST00000420995 ROCK2O75116 1388 aaKnown RBP21.42■■□□□ 1.02
TRIM13-204ENST00000420995 ST20-MTHFSA0A0A6YYL1 179 aa21.42■■□□□ 1.02
TRIM13-204ENST00000420995 ADCY10Q96PN6 1610 aa21.39■■□□□ 1.02
TRIM13-204ENST00000420995 KIF15Q9NS87 1388 aa21.39■■□□□ 1.02
TRIM13-204ENST00000420995 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.01
TRIM13-204ENST00000420995 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
TRIM13-204ENST00000420995 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
TRIM13-204ENST00000420995 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
TRIM13-204ENST00000420995 NBR1Q14596 966 aa21.36■■□□□ 1.01
TRIM13-204ENST00000420995 ARHGEF12Q9NZN5 1544 aa21.35■■□□□ 1.01
TRIM13-204ENST00000420995 MYBBP1AQ9BQG0 1328 aaKnown RBP21.34■■□□□ 1.01
TRIM13-204ENST00000420995 DEKP35659 375 aaKnown RBP21.32■■□□□ 1
TRIM13-204ENST00000420995 BRD4O60885 1362 aaPredicted RBP21.32■■□□□ 1
TRIM13-204ENST00000420995 CDC42BPAQ5VT25 1732 aa21.32■■□□□ 1
TRIM13-204ENST00000420995 PLEKHD1A6NEE1 506 aa21.32■■□□□ 1
TRIM13-204ENST00000420995 SALL2Q9Y467 1007 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms