RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CYB5RLQ6IPT4 315 aa12.65□□□□□ -0.38
SNCA-206ENST00000420646 MPHOSPH9Q99550 1183 aa12.64□□□□□ -0.39
SNCA-206ENST00000420646 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
SNCA-206ENST00000420646 ATP10BO94823 1461 aa12.64□□□□□ -0.39
SNCA-206ENST00000420646 DDX10Q13206 875 aaKnown RBP12.64□□□□□ -0.39
SNCA-206ENST00000420646 DAPK1P53355 1430 aa12.64□□□□□ -0.39
SNCA-206ENST00000420646 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
SNCA-206ENST00000420646 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
SNCA-206ENST00000420646 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
SNCA-206ENST00000420646 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
SNCA-206ENST00000420646 CHD1O14646 1710 aa12.61□□□□□ -0.39
SNCA-206ENST00000420646 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNCA-206ENST00000420646 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
SNCA-206ENST00000420646 CENPBP07199 599 aaPredicted RBP12.6□□□□□ -0.39
SNCA-206ENST00000420646 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
SNCA-206ENST00000420646 CAMSAP2Q08AD1 1489 aa12.59□□□□□ -0.39
SNCA-206ENST00000420646 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
SNCA-206ENST00000420646 ABCA8O94911 1581 aa12.58□□□□□ -0.4
SNCA-206ENST00000420646 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
SNCA-206ENST00000420646 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
SNCA-206ENST00000420646 L3MBTL2Q969R5 705 aa12.55□□□□□ -0.4
SNCA-206ENST00000420646 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
SNCA-206ENST00000420646 DNMT1P26358 1616 aaKnown RBP12.54□□□□□ -0.4
SNCA-206ENST00000420646 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
SNCA-206ENST00000420646 GCC2Q8IWJ2 1684 aa12.53□□□□□ -0.4
SNCA-206ENST00000420646 ROCK1Q13464 1354 aa12.52□□□□□ -0.4
SNCA-206ENST00000420646 ABCC10Q5T3U5 1492 aa12.52□□□□□ -0.41
SNCA-206ENST00000420646 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
SNCA-206ENST00000420646 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
SNCA-206ENST00000420646 KDM5BQ9UGL1 1544 aa12.5□□□□□ -0.41
SNCA-206ENST00000420646 PKD2Q13563 968 aa12.5□□□□□ -0.41
SNCA-206ENST00000420646 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
SNCA-206ENST00000420646 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
SNCA-206ENST00000420646 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
SNCA-206ENST00000420646 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
SNCA-206ENST00000420646 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
SNCA-206ENST00000420646 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
SNCA-206ENST00000420646 HSPA5P11021 654 aaKnown RBP12.47□□□□□ -0.41
SNCA-206ENST00000420646 ANKRD50Q9ULJ7 1429 aa12.47□□□□□ -0.41
SNCA-206ENST00000420646 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.41
SNCA-206ENST00000420646 ITSN2Q9NZM3 1697 aa12.46□□□□□ -0.41
SNCA-206ENST00000420646 NUP155O75694 1391 aa12.46□□□□□ -0.42
SNCA-206ENST00000420646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.42
SNCA-206ENST00000420646 PZPP20742 1482 aa12.45□□□□□ -0.42
SNCA-206ENST00000420646 SHROOM2Q13796 1616 aa12.44□□□□□ -0.42
SNCA-206ENST00000420646 KIF15Q9NS87 1388 aa12.44□□□□□ -0.42
SNCA-206ENST00000420646 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
SNCA-206ENST00000420646 MBD5Q9P267 1494 aa12.43□□□□□ -0.42
SNCA-206ENST00000420646 TTC37Q6PGP7 1564 aa12.42□□□□□ -0.42
SNCA-206ENST00000420646 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
SNCA-206ENST00000420646 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
SNCA-206ENST00000420646 ABCC2Q92887 1545 aa12.41□□□□□ -0.42
SNCA-206ENST00000420646 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
SNCA-206ENST00000420646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNCA-206ENST00000420646 SAMD9LQ8IVG5 1584 aa12.41□□□□□ -0.42
SNCA-206ENST00000420646 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.42
SNCA-206ENST00000420646 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
SNCA-206ENST00000420646 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.42
SNCA-206ENST00000420646 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
SNCA-206ENST00000420646 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNCA-206ENST00000420646 CLASP1Q7Z460 1538 aa12.39□□□□□ -0.43
SNCA-206ENST00000420646 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
SNCA-206ENST00000420646 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
SNCA-206ENST00000420646 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
SNCA-206ENST00000420646 ANP32CO43423 234 aa12.37□□□□□ -0.43
SNCA-206ENST00000420646 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
SNCA-206ENST00000420646 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
SNCA-206ENST00000420646 TEX14Q8IWB6 1497 aa12.37□□□□□ -0.43
SNCA-206ENST00000420646 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
SNCA-206ENST00000420646 RGL3Q3MIN7 710 aa12.36□□□□□ -0.43
SNCA-206ENST00000420646 ARHGEF12Q9NZN5 1544 aa12.36□□□□□ -0.43
SNCA-206ENST00000420646 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
SNCA-206ENST00000420646 PREX2Q70Z35 1606 aa12.34□□□□□ -0.43
SNCA-206ENST00000420646 EFCAB2Q5VUJ9 269 aa12.34□□□□□ -0.43
SNCA-206ENST00000420646 ZCCHC11Q5TAX3 1644 aaKnown RBP12.34□□□□□ -0.43
SNCA-206ENST00000420646 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
SNCA-206ENST00000420646 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
SNCA-206ENST00000420646 SHANK2Q9UPX8 1470 aa12.33□□□□□ -0.44
SNCA-206ENST00000420646 TRAPPC8Q9Y2L5 1435 aa12.32□□□□□ -0.44
SNCA-206ENST00000420646 PLEKHH2Q8IVE3 1493 aa12.32□□□□□ -0.44
SNCA-206ENST00000420646 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
SNCA-206ENST00000420646 PLCH2O75038 1416 aa12.31□□□□□ -0.44
SNCA-206ENST00000420646 ARHGEF5Q12774 1597 aa12.3□□□□□ -0.44
SNCA-206ENST00000420646 CCDC184Q52MB2 194 aa12.3□□□□□ -0.44
SNCA-206ENST00000420646 KIF7Q2M1P5 1343 aa12.28□□□□□ -0.44
SNCA-206ENST00000420646 MYO5CQ9NQX4 1742 aa12.27□□□□□ -0.44
SNCA-206ENST00000420646 FAM135AQ9P2D6 1515 aa12.27□□□□□ -0.45
SNCA-206ENST00000420646 UHRF1BP1LA0JNW5 1464 aa12.27□□□□□ -0.45
SNCA-206ENST00000420646 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
SNCA-206ENST00000420646 SPAG9O60271 1321 aaKnown RBP12.27□□□□□ -0.45
SNCA-206ENST00000420646 CARD11Q9BXL7 1154 aa12.26□□□□□ -0.45
SNCA-206ENST00000420646 SPATA31E1Q6ZUB1 1445 aa12.26□□□□□ -0.45
SNCA-206ENST00000420646 USP47Q96K76 1375 aa12.25□□□□□ -0.45
SNCA-206ENST00000420646 NBPF1Q3BBV0 1214 aa12.24□□□□□ -0.45
SNCA-206ENST00000420646 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
SNCA-206ENST00000420646 ASXL2Q76L83 1435 aa12.24□□□□□ -0.45
SNCA-206ENST00000420646 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
SNCA-206ENST00000420646 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
SNCA-206ENST00000420646 CCER2I3L3R5 266 aa12.24□□□□□ -0.45
SNCA-206ENST00000420646 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms