RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 POGZQ7Z3K3 1410 aa6.41□□□□□ -1.38
PTPN22-202ENST00000420377 ABCA9Q8IUA7 1624 aa6.41□□□□□ -1.38
PTPN22-202ENST00000420377 SAMD1Q6SPF0 538 aaPredicted RBP6.41□□□□□ -1.38
PTPN22-202ENST00000420377 ZCCHC11Q5TAX3 1644 aaKnown RBP6.4□□□□□ -1.38
PTPN22-202ENST00000420377 PTPRMP28827 1452 aa6.4□□□□□ -1.38
PTPN22-202ENST00000420377 UBE2Q2Q8WVN8 375 aa6.4□□□□□ -1.38
PTPN22-202ENST00000420377 IQGAP2Q13576 1575 aa6.4□□□□□ -1.39
PTPN22-202ENST00000420377 TTC37Q6PGP7 1564 aa6.39□□□□□ -1.39
PTPN22-202ENST00000420377 SPATA31D1Q6ZQQ2 1576 aa6.39□□□□□ -1.39
PTPN22-202ENST00000420377 ABCA8O94911 1581 aa6.38□□□□□ -1.39
PTPN22-202ENST00000420377 PLEKHG5O94827 1062 aa6.38□□□□□ -1.39
PTPN22-202ENST00000420377 EFCAB5A4FU69 1503 aa6.38□□□□□ -1.39
PTPN22-202ENST00000420377 ARHGEF40Q8TER5 1519 aa6.38□□□□□ -1.39
PTPN22-202ENST00000420377 FHOD3Q2V2M9 1422 aa6.38□□□□□ -1.39
PTPN22-202ENST00000420377 PREX1Q8TCU6 1659 aa6.38□□□□□ -1.39
PTPN22-202ENST00000420377 ZNF219Q9P2Y4 722 aaPredicted RBP6.37□□□□□ -1.39
PTPN22-202ENST00000420377 FAM135AQ9P2D6 1515 aa6.37□□□□□ -1.39
PTPN22-202ENST00000420377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.37□□□□□ -1.39
PTPN22-202ENST00000420377 HNRNPUL2Q1KMD3 747 aaKnown RBP6.37□□□□□ -1.39
PTPN22-202ENST00000420377 KIF27Q86VH2 1401 aa6.37□□□□□ -1.39
PTPN22-202ENST00000420377 FANCAO15360 1455 aa6.36□□□□□ -1.39
PTPN22-202ENST00000420377 KIAA0556O60303 1618 aa6.35□□□□□ -1.39
PTPN22-202ENST00000420377 SPDYE4A6NLX3 237 aa6.34□□□□□ -1.39
PTPN22-202ENST00000420377 CERKQ8TCT0 537 aa6.34□□□□□ -1.39
PTPN22-202ENST00000420377 COL17A1Q9UMD9 1497 aaPredicted RBP6.34□□□□□ -1.39
PTPN22-202ENST00000420377 TSPOAP1O95153 1857 aa6.34□□□□□ -1.39
PTPN22-202ENST00000420377 DISP1Q96F81 1524 aa6.34□□□□□ -1.39
PTPN22-202ENST00000420377 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
PTPN22-202ENST00000420377 MKRN4PQ13434 485 aaPredicted RBP6.33□□□□□ -1.4
PTPN22-202ENST00000420377 PODXL2Q9NZ53 605 aa6.33□□□□□ -1.4
PTPN22-202ENST00000420377 ARHGEF12Q9NZN5 1544 aa6.33□□□□□ -1.4
PTPN22-202ENST00000420377 IGF1RP08069 1367 aa6.33□□□□□ -1.4
PTPN22-202ENST00000420377 AGLP35573 1532 aa6.33□□□□□ -1.4
PTPN22-202ENST00000420377 AKNAQ7Z591 1439 aa6.32□□□□□ -1.4
PTPN22-202ENST00000420377 YEATS2Q9ULM3 1422 aa6.32□□□□□ -1.4
PTPN22-202ENST00000420377 MROH2AA6NES4 1674 aa6.31□□□□□ -1.4
PTPN22-202ENST00000420377 TIMELESSQ9UNS1 1208 aa6.31□□□□□ -1.4
PTPN22-202ENST00000420377 FER1L4A9Z1Z3 1794 aa6.31□□□□□ -1.4
PTPN22-202ENST00000420377 PLCB2Q00722 1185 aa6.31□□□□□ -1.4
PTPN22-202ENST00000420377 KLHL34Q8N239 644 aa6.31□□□□□ -1.4
PTPN22-202ENST00000420377 KIF21BO75037 1637 aa6.3□□□□□ -1.4
PTPN22-202ENST00000420377 CNTLNQ9NXG0 1405 aa6.3□□□□□ -1.4
PTPN22-202ENST00000420377 NPATQ14207 1427 aa6.29□□□□□ -1.4
PTPN22-202ENST00000420377 VASPP50552 380 aaPredicted RBP6.29□□□□□ -1.4
PTPN22-202ENST00000420377 HAP1P54257 671 aaPredicted RBP6.29□□□□□ -1.4
PTPN22-202ENST00000420377 PLA2R1Q13018 1463 aa6.29□□□□□ -1.4
PTPN22-202ENST00000420377 FRMPD1Q5SYB0 1578 aa6.28□□□□□ -1.4
PTPN22-202ENST00000420377 RICTORQ6R327 1708 aa6.28□□□□□ -1.4
PTPN22-202ENST00000420377 IFNLR1Q8IU57 520 aaPredicted RBP6.28□□□□□ -1.4
PTPN22-202ENST00000420377 CTTNBP2Q8WZ74 1663 aa6.28□□□□□ -1.4
PTPN22-202ENST00000420377 SETD1BQ9UPS6 1966 aaKnown RBP6.28□□□□□ -1.4
PTPN22-202ENST00000420377 HOMEZQ8IX15 550 aa6.27□□□□□ -1.41
PTPN22-202ENST00000420377 LTBP4Q8N2S1 1624 aa6.27□□□□□ -1.41
PTPN22-202ENST00000420377 MADDQ8WXG6 1647 aa6.27□□□□□ -1.41
PTPN22-202ENST00000420377 FBXO3Q9UK99 471 aa6.27□□□□□ -1.41
PTPN22-202ENST00000420377 ANP32EQ9BTT0 268 aa6.27□□□□□ -1.41
PTPN22-202ENST00000420377 SPINK5Q9NQ38 1064 aaPredicted RBP6.27□□□□□ -1.41
PTPN22-202ENST00000420377 CARMIL1Q5VZK9 1371 aa6.26□□□□□ -1.41
PTPN22-202ENST00000420377 RAPGEF2Q9Y4G8 1499 aa6.26□□□□□ -1.41
PTPN22-202ENST00000420377 CPS1P31327 1500 aa6.26□□□□□ -1.41
PTPN22-202ENST00000420377 DENND4BO75064 1496 aaPredicted RBP6.26□□□□□ -1.41
PTPN22-202ENST00000420377 ZNF142P52746 1687 aaPredicted RBP6.25□□□□□ -1.41
PTPN22-202ENST00000420377 ZFYVE16Q7Z3T8 1539 aa6.25□□□□□ -1.41
PTPN22-202ENST00000420377 RIMS1Q86UR5 1692 aaKnown RBP6.24□□□□□ -1.41
PTPN22-202ENST00000420377 C9orf84Q5VXU9 1444 aa6.23□□□□□ -1.41
PTPN22-202ENST00000420377 ATP10AO60312 1499 aa6.23□□□□□ -1.41
PTPN22-202ENST00000420377 STRCQ7RTU9 1775 aa6.22□□□□□ -1.41
PTPN22-202ENST00000420377 POLA2Q14181 598 aa6.22□□□□□ -1.41
PTPN22-202ENST00000420377 PKD2Q13563 968 aa6.21□□□□□ -1.41
PTPN22-202ENST00000420377 SAMD9Q5K651 1589 aa6.21□□□□□ -1.42
PTPN22-202ENST00000420377 PKNOX2Q96KN3 472 aa6.21□□□□□ -1.42
PTPN22-202ENST00000420377 DISP3Q9P2K9 1392 aa6.21□□□□□ -1.42
PTPN22-202ENST00000420377 KDM5CP41229 1560 aa6.2□□□□□ -1.42
PTPN22-202ENST00000420377 UHRF1BP1Q6BDS2 1440 aa6.2□□□□□ -1.42
PTPN22-202ENST00000420377 NCOA1Q15788 1441 aa6.2□□□□□ -1.42
PTPN22-202ENST00000420377 PROM2Q8N271 834 aa6.19□□□□□ -1.42
PTPN22-202ENST00000420377 MLH3Q9UHC1 1453 aa6.18□□□□□ -1.42
PTPN22-202ENST00000420377 PTPRKQ15262 1439 aa6.18□□□□□ -1.42
PTPN22-202ENST00000420377 TRAPPC8Q9Y2L5 1435 aa6.18□□□□□ -1.42
PTPN22-202ENST00000420377 TULP1O00294 542 aaPredicted RBP6.18□□□□□ -1.42
PTPN22-202ENST00000420377 RAPGEF6Q8TEU7 1601 aa6.18□□□□□ -1.42
PTPN22-202ENST00000420377 SYNMO15061 1565 aa6.18□□□□□ -1.42
PTPN22-202ENST00000420377 PDIA4P13667 645 aaKnown RBP6.18□□□□□ -1.42
PTPN22-202ENST00000420377 ATP10BO94823 1461 aa6.17□□□□□ -1.42
PTPN22-202ENST00000420377 CAPN15O75808 1086 aa6.17□□□□□ -1.42
PTPN22-202ENST00000420377 ABCB7O75027 752 aa6.17□□□□□ -1.42
PTPN22-202ENST00000420377 NEFLP07196 543 aa6.17□□□□□ -1.42
PTPN22-202ENST00000420377 DEPDC5O75140 1603 aa6.16□□□□□ -1.42
PTPN22-202ENST00000420377 TCOF1Q13428 1488 aaKnown RBP6.16□□□□□ -1.42
PTPN22-202ENST00000420377 MED1Q15648 1581 aaPredicted RBP6.15□□□□□ -1.42
PTPN22-202ENST00000420377 ACIN1Q9UKV3 1341 aaKnown RBP6.15□□□□□ -1.42
PTPN22-202ENST00000420377 PLCH2O75038 1416 aa6.15□□□□□ -1.43
PTPN22-202ENST00000420377 ANO8Q9HCE9 1232 aaPredicted RBP6.14□□□□□ -1.43
PTPN22-202ENST00000420377 ZNF518AQ6AHZ1 1483 aa6.14□□□□□ -1.43
PTPN22-202ENST00000420377 PRXQ9BXM0 1461 aa6.14□□□□□ -1.43
PTPN22-202ENST00000420377 MED14O60244 1454 aa6.13□□□□□ -1.43
PTPN22-202ENST00000420377 EEA1Q15075 1411 aa6.13□□□□□ -1.43
PTPN22-202ENST00000420377 HECW1Q76N89 1606 aa6.13□□□□□ -1.43
PTPN22-202ENST00000420377 ILDR2Q71H61 639 aa6.12□□□□□ -1.43
PTPN22-202ENST00000420377 KIF14Q15058 1648 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms