RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
TNFAIP3-202ENST00000420009 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
TNFAIP3-202ENST00000420009 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
TNFAIP3-202ENST00000420009 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
TNFAIP3-202ENST00000420009 YEATS2Q9ULM3 1422 aa17.26■□□□□ 0.35
TNFAIP3-202ENST00000420009 HECW1Q76N89 1606 aa17.23■□□□□ 0.35
TNFAIP3-202ENST00000420009 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP3-202ENST00000420009 CDK13Q14004 1512 aaKnown RBP17.22■□□□□ 0.35
TNFAIP3-202ENST00000420009 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
TNFAIP3-202ENST00000420009 HSPA2P54652 639 aa17.2■□□□□ 0.34
TNFAIP3-202ENST00000420009 PLCH2O75038 1416 aa17.19■□□□□ 0.34
TNFAIP3-202ENST00000420009 FER1L4A9Z1Z3 1794 aa17.18■□□□□ 0.34
TNFAIP3-202ENST00000420009 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
TNFAIP3-202ENST00000420009 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
TNFAIP3-202ENST00000420009 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
TNFAIP3-202ENST00000420009 ATP10AO60312 1499 aa17.14■□□□□ 0.33
TNFAIP3-202ENST00000420009 MYO5CQ9NQX4 1742 aa17.13■□□□□ 0.33
TNFAIP3-202ENST00000420009 MLECQ14165 292 aa17.12■□□□□ 0.33
TNFAIP3-202ENST00000420009 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
TNFAIP3-202ENST00000420009 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
TNFAIP3-202ENST00000420009 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
TNFAIP3-202ENST00000420009 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
TNFAIP3-202ENST00000420009 KDM5CP41229 1560 aa17.1■□□□□ 0.33
TNFAIP3-202ENST00000420009 KIF14Q15058 1648 aa17.1■□□□□ 0.33
TNFAIP3-202ENST00000420009 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
TNFAIP3-202ENST00000420009 ARHGAP35Q9NRY4 1499 aa17.08■□□□□ 0.32
TNFAIP3-202ENST00000420009 TROQ12816 1431 aaPredicted RBP17.06■□□□□ 0.32
TNFAIP3-202ENST00000420009 REREQ9P2R6 1566 aa17.06■□□□□ 0.32
TNFAIP3-202ENST00000420009 DIP2CQ9Y2E4 1556 aa17.05■□□□□ 0.32
TNFAIP3-202ENST00000420009 ARHGAP5Q13017 1502 aa17.05■□□□□ 0.32
TNFAIP3-202ENST00000420009 CDK11AQ9UQ88 783 aaPredicted RBP17.03■□□□□ 0.32
TNFAIP3-202ENST00000420009 STRCQ7RTU9 1775 aa17.02■□□□□ 0.32
TNFAIP3-202ENST00000420009 CEBPAP49715 358 aaPredicted RBP17.02■□□□□ 0.32
TNFAIP3-202ENST00000420009 ABCA6Q8N139 1617 aa17.01■□□□□ 0.31
TNFAIP3-202ENST00000420009 CLIP1P30622 1438 aa17.01■□□□□ 0.31
TNFAIP3-202ENST00000420009 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
TNFAIP3-202ENST00000420009 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
TNFAIP3-202ENST00000420009 AFAP1Q8N556 730 aa17■□□□□ 0.31
TNFAIP3-202ENST00000420009 LRRIQ1Q96JM4 1722 aa17■□□□□ 0.31
TNFAIP3-202ENST00000420009 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
TNFAIP3-202ENST00000420009 AGLP35573 1532 aa16.99■□□□□ 0.31
TNFAIP3-202ENST00000420009 ABCC1P33527 1531 aa16.98■□□□□ 0.31
TNFAIP3-202ENST00000420009 UBTFP17480 764 aaKnown RBP16.98■□□□□ 0.31
TNFAIP3-202ENST00000420009 PREX2Q70Z35 1606 aa16.97■□□□□ 0.31
TNFAIP3-202ENST00000420009 CDC42BPBQ9Y5S2 1711 aa16.97■□□□□ 0.31
TNFAIP3-202ENST00000420009 C3P01024 1663 aa16.96■□□□□ 0.31
TNFAIP3-202ENST00000420009 TRAPPC8Q9Y2L5 1435 aa16.95■□□□□ 0.3
TNFAIP3-202ENST00000420009 SETD1BQ9UPS6 1966 aaKnown RBP16.94■□□□□ 0.3
TNFAIP3-202ENST00000420009 PTPRTO14522 1441 aa16.94■□□□□ 0.3
TNFAIP3-202ENST00000420009 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
TNFAIP3-202ENST00000420009 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
TNFAIP3-202ENST00000420009 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
TNFAIP3-202ENST00000420009 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
TNFAIP3-202ENST00000420009 KIDINS220Q9ULH0 1771 aa16.91■□□□□ 0.3
TNFAIP3-202ENST00000420009 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
TNFAIP3-202ENST00000420009 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
TNFAIP3-202ENST00000420009 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
TNFAIP3-202ENST00000420009 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
TNFAIP3-202ENST00000420009 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
TNFAIP3-202ENST00000420009 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
TNFAIP3-202ENST00000420009 DISP3Q9P2K9 1392 aa16.87■□□□□ 0.29
TNFAIP3-202ENST00000420009 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
TNFAIP3-202ENST00000420009 SAMD9LQ8IVG5 1584 aa16.86■□□□□ 0.29
TNFAIP3-202ENST00000420009 MROH2AA6NES4 1674 aa16.85■□□□□ 0.29
TNFAIP3-202ENST00000420009 ILDR2Q71H61 639 aa16.85■□□□□ 0.29
TNFAIP3-202ENST00000420009 NPATQ14207 1427 aa16.85■□□□□ 0.29
TNFAIP3-202ENST00000420009 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
TNFAIP3-202ENST00000420009 FYCO1Q9BQS8 1478 aa16.84■□□□□ 0.29
TNFAIP3-202ENST00000420009 SPATA31D1Q6ZQQ2 1576 aa16.83■□□□□ 0.28
TNFAIP3-202ENST00000420009 SYCP2Q9BX26 1530 aa16.82■□□□□ 0.28
TNFAIP3-202ENST00000420009 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
TNFAIP3-202ENST00000420009 PLXNC1O60486 1568 aa16.81■□□□□ 0.28
TNFAIP3-202ENST00000420009 SOCS7O14512 581 aa16.8■□□□□ 0.28
TNFAIP3-202ENST00000420009 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
TNFAIP3-202ENST00000420009 INO80Q9ULG1 1556 aaPredicted RBP16.79■□□□□ 0.28
TNFAIP3-202ENST00000420009 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
TNFAIP3-202ENST00000420009 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
TNFAIP3-202ENST00000420009 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
TNFAIP3-202ENST00000420009 KIAA1107Q9UPP5 1409 aa16.77■□□□□ 0.27
TNFAIP3-202ENST00000420009 MYO3AQ8NEV4 1616 aa16.77■□□□□ 0.27
TNFAIP3-202ENST00000420009 SPAG9O60271 1321 aaKnown RBP16.76■□□□□ 0.27
TNFAIP3-202ENST00000420009 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
TNFAIP3-202ENST00000420009 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
TNFAIP3-202ENST00000420009 PLEKHH2Q8IVE3 1493 aa16.75■□□□□ 0.27
TNFAIP3-202ENST00000420009 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
TNFAIP3-202ENST00000420009 A2MP01023 1474 aa16.74■□□□□ 0.27
TNFAIP3-202ENST00000420009 ZNF777Q9ULD5 760 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP3-202ENST00000420009 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
TNFAIP3-202ENST00000420009 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
TNFAIP3-202ENST00000420009 PTPRKQ15262 1439 aa16.73■□□□□ 0.27
TNFAIP3-202ENST00000420009 HNRNPMP52272 730 aaKnown RBP eCLIP16.72■□□□□ 0.27
TNFAIP3-202ENST00000420009 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
TNFAIP3-202ENST00000420009 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP3-202ENST00000420009 NCKAP5LQ9HCH0 1330 aa16.7■□□□□ 0.26
TNFAIP3-202ENST00000420009 PKD2Q13563 968 aa16.69■□□□□ 0.26
TNFAIP3-202ENST00000420009 CFDP1Q9UEE9 299 aaPredicted RBP16.69■□□□□ 0.26
TNFAIP3-202ENST00000420009 CCNB3Q8WWL7 1395 aa16.68■□□□□ 0.26
TNFAIP3-202ENST00000420009 ADGBQ8N7X0 1667 aa16.68■□□□□ 0.26
TNFAIP3-202ENST00000420009 TIAM1Q13009 1591 aa16.66■□□□□ 0.26
TNFAIP3-202ENST00000420009 MBD5Q9P267 1494 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms