RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 PTPRGP23470 1445 aa12.05□□□□□ -0.48
COL12A1-204ENST00000419671 CDC42BPAQ5VT25 1732 aa12.04□□□□□ -0.48
COL12A1-204ENST00000419671 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
COL12A1-204ENST00000419671 GCC2Q8IWJ2 1684 aa12.04□□□□□ -0.48
COL12A1-204ENST00000419671 MAPKBP1O60336 1514 aa12.04□□□□□ -0.48
COL12A1-204ENST00000419671 CDK11AQ9UQ88 783 aaPredicted RBP12.03□□□□□ -0.48
COL12A1-204ENST00000419671 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
COL12A1-204ENST00000419671 DNMT1P26358 1616 aaKnown RBP12.02□□□□□ -0.49
COL12A1-204ENST00000419671 NAIPQ13075 1403 aa12□□□□□ -0.49
COL12A1-204ENST00000419671 UACAQ9BZF9 1416 aa12□□□□□ -0.49
COL12A1-204ENST00000419671 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
COL12A1-204ENST00000419671 ABCC2Q92887 1545 aa11.98□□□□□ -0.49
COL12A1-204ENST00000419671 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
COL12A1-204ENST00000419671 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
COL12A1-204ENST00000419671 CROCC2H7BZ55 1655 aa11.98□□□□□ -0.49
COL12A1-204ENST00000419671 AKNAQ7Z591 1439 aa11.97□□□□□ -0.49
COL12A1-204ENST00000419671 KDM6BO15054 1643 aa11.97□□□□□ -0.49
COL12A1-204ENST00000419671 CAMSAP2Q08AD1 1489 aa11.97□□□□□ -0.49
COL12A1-204ENST00000419671 DAPK1P53355 1430 aa11.97□□□□□ -0.49
COL12A1-204ENST00000419671 ZNF644Q9H582 1327 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-204ENST00000419671 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
COL12A1-204ENST00000419671 PLEKHD1A6NEE1 506 aa11.96□□□□□ -0.5
COL12A1-204ENST00000419671 ZCCHC11Q5TAX3 1644 aaKnown RBP11.95□□□□□ -0.5
COL12A1-204ENST00000419671 ADGBQ8N7X0 1667 aa11.95□□□□□ -0.5
COL12A1-204ENST00000419671 ABCC5O15440 1437 aa11.95□□□□□ -0.5
COL12A1-204ENST00000419671 PREX2Q70Z35 1606 aa11.94□□□□□ -0.5
COL12A1-204ENST00000419671 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
COL12A1-204ENST00000419671 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-204ENST00000419671 UHRF1BP1LA0JNW5 1464 aa11.92□□□□□ -0.5
COL12A1-204ENST00000419671 RRP7BPQ9NSQ0 103 aa11.92□□□□□ -0.5
COL12A1-204ENST00000419671 ROCK1Q13464 1354 aa11.91□□□□□ -0.5
COL12A1-204ENST00000419671 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
COL12A1-204ENST00000419671 MYO5CQ9NQX4 1742 aa11.91□□□□□ -0.5
COL12A1-204ENST00000419671 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-204ENST00000419671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.9□□□□□ -0.5
COL12A1-204ENST00000419671 KDM5BQ9UGL1 1544 aa11.9□□□□□ -0.5
COL12A1-204ENST00000419671 SAMD9LQ8IVG5 1584 aa11.89□□□□□ -0.51
COL12A1-204ENST00000419671 DENND4BO75064 1496 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-204ENST00000419671 MAPK8IP2Q13387 824 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-204ENST00000419671 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-204ENST00000419671 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-204ENST00000419671 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
COL12A1-204ENST00000419671 SIN3AQ96ST3 1273 aa11.86□□□□□ -0.51
COL12A1-204ENST00000419671 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
COL12A1-204ENST00000419671 ERICH6Q7L0X2 663 aa11.86□□□□□ -0.51
COL12A1-204ENST00000419671 NCOA1Q15788 1441 aa11.85□□□□□ -0.51
COL12A1-204ENST00000419671 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
COL12A1-204ENST00000419671 MBD5Q9P267 1494 aa11.83□□□□□ -0.51
COL12A1-204ENST00000419671 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
COL12A1-204ENST00000419671 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
COL12A1-204ENST00000419671 NEUROD1Q13562 356 aa11.82□□□□□ -0.52
COL12A1-204ENST00000419671 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
COL12A1-204ENST00000419671 DIEXFQ68CQ4 756 aaKnown RBP11.81□□□□□ -0.52
COL12A1-204ENST00000419671 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
COL12A1-204ENST00000419671 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
COL12A1-204ENST00000419671 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
COL12A1-204ENST00000419671 TRIM52Q96A61 297 aa11.79□□□□□ -0.52
COL12A1-204ENST00000419671 HNRNPMP52272 730 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL12A1-204ENST00000419671 KCNH8Q96L42 1107 aa11.78□□□□□ -0.52
COL12A1-204ENST00000419671 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
COL12A1-204ENST00000419671 MAST1Q9Y2H9 1570 aa11.78□□□□□ -0.52
COL12A1-204ENST00000419671 MPHOSPH9Q99550 1183 aa11.78□□□□□ -0.52
COL12A1-204ENST00000419671 WDR7Q9Y4E6 1490 aa11.77□□□□□ -0.53
COL12A1-204ENST00000419671 PLCH2O75038 1416 aa11.77□□□□□ -0.53
COL12A1-204ENST00000419671 ABCA9Q8IUA7 1624 aa11.77□□□□□ -0.53
COL12A1-204ENST00000419671 PZPP20742 1482 aa11.77□□□□□ -0.53
COL12A1-204ENST00000419671 ACIN1Q9UKV3 1341 aaKnown RBP11.77□□□□□ -0.53
COL12A1-204ENST00000419671 ANKRD50Q9ULJ7 1429 aa11.76□□□□□ -0.53
COL12A1-204ENST00000419671 ABCC1P33527 1531 aa11.76□□□□□ -0.53
COL12A1-204ENST00000419671 ARHGEF12Q9NZN5 1544 aa11.76□□□□□ -0.53
COL12A1-204ENST00000419671 KIAA1107Q9UPP5 1409 aa11.75□□□□□ -0.53
COL12A1-204ENST00000419671 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
COL12A1-204ENST00000419671 PLXNC1O60486 1568 aa11.75□□□□□ -0.53
COL12A1-204ENST00000419671 TSPY4P0CV99 314 aa11.74□□□□□ -0.53
COL12A1-204ENST00000419671 TSPY10P0CW01 314 aa11.74□□□□□ -0.53
COL12A1-204ENST00000419671 PLEKHH2Q8IVE3 1493 aa11.74□□□□□ -0.53
COL12A1-204ENST00000419671 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
COL12A1-204ENST00000419671 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-204ENST00000419671 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-204ENST00000419671 KIF15Q9NS87 1388 aa11.73□□□□□ -0.53
COL12A1-204ENST00000419671 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
COL12A1-204ENST00000419671 KDM5DQ9BY66 1539 aa11.72□□□□□ -0.53
COL12A1-204ENST00000419671 ASXL2Q76L83 1435 aa11.72□□□□□ -0.53
COL12A1-204ENST00000419671 ANKRD30BQ9BXX2 1392 aa11.72□□□□□ -0.53
COL12A1-204ENST00000419671 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
COL12A1-204ENST00000419671 UNC13BO14795 1591 aa11.69□□□□□ -0.54
COL12A1-204ENST00000419671 EFCAB2Q5VUJ9 269 aa11.69□□□□□ -0.54
COL12A1-204ENST00000419671 TRAPPC8Q9Y2L5 1435 aa11.68□□□□□ -0.54
COL12A1-204ENST00000419671 DAXXQ9UER7 740 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-204ENST00000419671 FANCAO15360 1455 aa11.67□□□□□ -0.54
COL12A1-204ENST00000419671 TEX14Q8IWB6 1497 aa11.67□□□□□ -0.54
COL12A1-204ENST00000419671 DUOX2Q9NRD8 1548 aa11.66□□□□□ -0.54
COL12A1-204ENST00000419671 MSH5O43196 834 aa11.66□□□□□ -0.54
COL12A1-204ENST00000419671 NUP155O75694 1391 aa11.66□□□□□ -0.54
COL12A1-204ENST00000419671 ZFYVE16Q7Z3T8 1539 aa11.66□□□□□ -0.54
COL12A1-204ENST00000419671 RIMBP3CA6NJZ7 1639 aa11.65□□□□□ -0.54
COL12A1-204ENST00000419671 RIMBP3BA6NNM3 1639 aa11.65□□□□□ -0.54
COL12A1-204ENST00000419671 RIMBP3Q9UFD9 1639 aa11.65□□□□□ -0.54
COL12A1-204ENST00000419671 INO80Q9ULG1 1556 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-204ENST00000419671 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms