RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 PLCH2O75038 1416 aa13.25□□□□□ -0.29
CNOT9-203ENST00000418808 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-203ENST00000418808 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
CNOT9-203ENST00000418808 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
CNOT9-203ENST00000418808 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
CNOT9-203ENST00000418808 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
CNOT9-203ENST00000418808 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
CNOT9-203ENST00000418808 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
CNOT9-203ENST00000418808 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
CNOT9-203ENST00000418808 MYOM3Q5VTT5 1437 aa13.2□□□□□ -0.3
CNOT9-203ENST00000418808 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-203ENST00000418808 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
CNOT9-203ENST00000418808 MBD5Q9P267 1494 aa13.18□□□□□ -0.3
CNOT9-203ENST00000418808 TSPOAP1O95153 1857 aa13.17□□□□□ -0.3
CNOT9-203ENST00000418808 FGD6Q6ZV73 1430 aa13.17□□□□□ -0.3
CNOT9-203ENST00000418808 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
CNOT9-203ENST00000418808 FANCAO15360 1455 aa13.16□□□□□ -0.3
CNOT9-203ENST00000418808 TCOF1Q13428 1488 aaKnown RBP13.16□□□□□ -0.3
CNOT9-203ENST00000418808 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.3
CNOT9-203ENST00000418808 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
CNOT9-203ENST00000418808 APLP2Q06481 763 aa13.15□□□□□ -0.3
CNOT9-203ENST00000418808 NEO1Q92859 1461 aa13.15□□□□□ -0.3
CNOT9-203ENST00000418808 PTPRKQ15262 1439 aa13.14□□□□□ -0.31
CNOT9-203ENST00000418808 AKNAQ7Z591 1439 aa13.14□□□□□ -0.31
CNOT9-203ENST00000418808 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
CNOT9-203ENST00000418808 TRAPPC8Q9Y2L5 1435 aa13.14□□□□□ -0.31
CNOT9-203ENST00000418808 ABCC1P33527 1531 aa13.14□□□□□ -0.31
CNOT9-203ENST00000418808 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
CNOT9-203ENST00000418808 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
CNOT9-203ENST00000418808 KDM6BO15054 1643 aa13.12□□□□□ -0.31
CNOT9-203ENST00000418808 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
CNOT9-203ENST00000418808 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
CNOT9-203ENST00000418808 CFDP1Q9UEE9 299 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-203ENST00000418808 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
CNOT9-203ENST00000418808 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
CNOT9-203ENST00000418808 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
CNOT9-203ENST00000418808 ABCC5O15440 1437 aa13.09□□□□□ -0.31
CNOT9-203ENST00000418808 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNOT9-203ENST00000418808 RICTORQ6R327 1708 aa13.09□□□□□ -0.31
CNOT9-203ENST00000418808 SCAPERQ9BY12 1400 aa13.09□□□□□ -0.31
CNOT9-203ENST00000418808 ADGRL1O94910 1474 aa13.09□□□□□ -0.31
CNOT9-203ENST00000418808 POGZQ7Z3K3 1410 aa13.08□□□□□ -0.32
CNOT9-203ENST00000418808 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
CNOT9-203ENST00000418808 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
CNOT9-203ENST00000418808 KDM5CP41229 1560 aa13.07□□□□□ -0.32
CNOT9-203ENST00000418808 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
CNOT9-203ENST00000418808 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
CNOT9-203ENST00000418808 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
CNOT9-203ENST00000418808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.06□□□□□ -0.32
CNOT9-203ENST00000418808 CFAP74Q9C0B2 1584 aa13.04□□□□□ -0.32
CNOT9-203ENST00000418808 DNMT1P26358 1616 aaKnown RBP13.04□□□□□ -0.32
CNOT9-203ENST00000418808 KDM4FA0A1W2PPD8 638 aa13.04□□□□□ -0.32
CNOT9-203ENST00000418808 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
CNOT9-203ENST00000418808 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
CNOT9-203ENST00000418808 SIGLEC1Q9BZZ2 1709 aa13.03□□□□□ -0.32
CNOT9-203ENST00000418808 DAPK1P53355 1430 aa13.03□□□□□ -0.32
CNOT9-203ENST00000418808 YEATS2Q9ULM3 1422 aa13.03□□□□□ -0.32
CNOT9-203ENST00000418808 PLEKHH2Q8IVE3 1493 aa13.02□□□□□ -0.33
CNOT9-203ENST00000418808 ZFYVE16Q7Z3T8 1539 aa13.02□□□□□ -0.33
CNOT9-203ENST00000418808 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
CNOT9-203ENST00000418808 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.33
CNOT9-203ENST00000418808 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
CNOT9-203ENST00000418808 CROCC2H7BZ55 1655 aa13□□□□□ -0.33
CNOT9-203ENST00000418808 MAST1Q9Y2H9 1570 aa13□□□□□ -0.33
CNOT9-203ENST00000418808 MLH3Q9UHC1 1453 aa13□□□□□ -0.33
CNOT9-203ENST00000418808 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
CNOT9-203ENST00000418808 ABCA6Q8N139 1617 aa12.99□□□□□ -0.33
CNOT9-203ENST00000418808 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
CNOT9-203ENST00000418808 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
CNOT9-203ENST00000418808 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
CNOT9-203ENST00000418808 DIP2CQ9Y2E4 1556 aa12.97□□□□□ -0.33
CNOT9-203ENST00000418808 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
CNOT9-203ENST00000418808 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
CNOT9-203ENST00000418808 ATP7AQ04656 1500 aa12.96□□□□□ -0.33
CNOT9-203ENST00000418808 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.34
CNOT9-203ENST00000418808 HECW2Q9P2P5 1572 aa12.95□□□□□ -0.34
CNOT9-203ENST00000418808 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
CNOT9-203ENST00000418808 ARHGEF40Q8TER5 1519 aa12.93□□□□□ -0.34
CNOT9-203ENST00000418808 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
CNOT9-203ENST00000418808 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
CNOT9-203ENST00000418808 SPAG9O60271 1321 aaKnown RBP12.92□□□□□ -0.34
CNOT9-203ENST00000418808 MAGI2Q86UL8 1455 aa12.92□□□□□ -0.34
CNOT9-203ENST00000418808 NAIPQ13075 1403 aa12.91□□□□□ -0.34
CNOT9-203ENST00000418808 RSPH4AQ5TD94 716 aa12.91□□□□□ -0.34
CNOT9-203ENST00000418808 ROCK1Q13464 1354 aa12.91□□□□□ -0.34
CNOT9-203ENST00000418808 ITGAEP38570 1179 aa12.9□□□□□ -0.34
CNOT9-203ENST00000418808 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
CNOT9-203ENST00000418808 REREQ9P2R6 1566 aa12.9□□□□□ -0.35
CNOT9-203ENST00000418808 MROH1Q8NDA8 1641 aa12.88□□□□□ -0.35
CNOT9-203ENST00000418808 RRP7BPQ9NSQ0 103 aa12.88□□□□□ -0.35
CNOT9-203ENST00000418808 ATP10AO60312 1499 aa12.88□□□□□ -0.35
CNOT9-203ENST00000418808 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
CNOT9-203ENST00000418808 DHX29Q7Z478 1369 aaKnown RBP12.87□□□□□ -0.35
CNOT9-203ENST00000418808 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
CNOT9-203ENST00000418808 A2MP01023 1474 aa12.86□□□□□ -0.35
CNOT9-203ENST00000418808 TRIM26Q12899 539 aaPredicted RBP12.86□□□□□ -0.35
CNOT9-203ENST00000418808 AGLP35573 1532 aa12.85□□□□□ -0.35
CNOT9-203ENST00000418808 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
CNOT9-203ENST00000418808 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
CNOT9-203ENST00000418808 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms