RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ARHGEF40Q8TER5 1519 aa21.06■□□□□ 0.96
TMEM248-203ENST00000418375 HECW2Q9P2P5 1572 aa21.06■□□□□ 0.96
TMEM248-203ENST00000418375 KIF14Q15058 1648 aa21.05■□□□□ 0.96
TMEM248-203ENST00000418375 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
TMEM248-203ENST00000418375 ZMYM4Q5VZL5 1548 aa21.04■□□□□ 0.96
TMEM248-203ENST00000418375 ADAMTSL3P82987 1691 aa21.03■□□□□ 0.96
TMEM248-203ENST00000418375 PTPRMP28827 1452 aa21.02■□□□□ 0.96
TMEM248-203ENST00000418375 MAGI2Q86UL8 1455 aa21.02■□□□□ 0.96
TMEM248-203ENST00000418375 POGZQ7Z3K3 1410 aa21.02■□□□□ 0.96
TMEM248-203ENST00000418375 YEATS2Q9ULM3 1422 aa21.01■□□□□ 0.95
TMEM248-203ENST00000418375 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
TMEM248-203ENST00000418375 BCORL1Q5H9F3 1711 aa21■□□□□ 0.95
TMEM248-203ENST00000418375 MYO5CQ9NQX4 1742 aa20.99■□□□□ 0.95
TMEM248-203ENST00000418375 APLP2Q06481 763 aa20.98■□□□□ 0.95
TMEM248-203ENST00000418375 ARHGAP5Q13017 1502 aa20.98■□□□□ 0.95
TMEM248-203ENST00000418375 EHBP1L1Q8N3D4 1523 aa20.96■□□□□ 0.95
TMEM248-203ENST00000418375 TIAM1Q13009 1591 aa20.96■□□□□ 0.95
TMEM248-203ENST00000418375 MADDQ8WXG6 1647 aa20.96■□□□□ 0.95
TMEM248-203ENST00000418375 MAP3K1Q13233 1512 aa20.95■□□□□ 0.94
TMEM248-203ENST00000418375 ZNF518AQ6AHZ1 1483 aa20.93■□□□□ 0.94
TMEM248-203ENST00000418375 ATP10AO60312 1499 aa20.91■□□□□ 0.94
TMEM248-203ENST00000418375 AFAP1Q8N556 730 aa20.91■□□□□ 0.94
TMEM248-203ENST00000418375 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
TMEM248-203ENST00000418375 MLECQ14165 292 aa20.9■□□□□ 0.94
TMEM248-203ENST00000418375 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
TMEM248-203ENST00000418375 C9orf84Q5VXU9 1444 aa20.88■□□□□ 0.93
TMEM248-203ENST00000418375 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
TMEM248-203ENST00000418375 SIGLEC1Q9BZZ2 1709 aa20.87■□□□□ 0.93
TMEM248-203ENST00000418375 RIMS1Q86UR5 1692 aaKnown RBP20.86■□□□□ 0.93
TMEM248-203ENST00000418375 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
TMEM248-203ENST00000418375 PREX2Q70Z35 1606 aa20.86■□□□□ 0.93
TMEM248-203ENST00000418375 KDM5CP41229 1560 aa20.85■□□□□ 0.93
TMEM248-203ENST00000418375 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
TMEM248-203ENST00000418375 CDC42BPBQ9Y5S2 1711 aa20.85■□□□□ 0.93
TMEM248-203ENST00000418375 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
TMEM248-203ENST00000418375 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
TMEM248-203ENST00000418375 SUPT6HQ7KZ85 1726 aaKnown RBP20.84■□□□□ 0.93
TMEM248-203ENST00000418375 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
TMEM248-203ENST00000418375 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
TMEM248-203ENST00000418375 TRAPPC8Q9Y2L5 1435 aa20.82■□□□□ 0.92
TMEM248-203ENST00000418375 ABCC1P33527 1531 aa20.82■□□□□ 0.92
TMEM248-203ENST00000418375 ARHGEF12Q9NZN5 1544 aa20.81■□□□□ 0.92
TMEM248-203ENST00000418375 MLH3Q9UHC1 1453 aa20.81■□□□□ 0.92
TMEM248-203ENST00000418375 ILDR1Q86SU0 546 aaPredicted RBP20.8■□□□□ 0.92
TMEM248-203ENST00000418375 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
TMEM248-203ENST00000418375 CDC42BPAQ5VT25 1732 aa20.8■□□□□ 0.92
TMEM248-203ENST00000418375 LMTK3Q96Q04 1460 aa20.79■□□□□ 0.92
TMEM248-203ENST00000418375 DIP2CQ9Y2E4 1556 aa20.77■□□□□ 0.92
TMEM248-203ENST00000418375 FER1L4A9Z1Z3 1794 aa20.75■□□□□ 0.91
TMEM248-203ENST00000418375 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
TMEM248-203ENST00000418375 REREQ9P2R6 1566 aa20.74■□□□□ 0.91
TMEM248-203ENST00000418375 PLEKHH2Q8IVE3 1493 aa20.74■□□□□ 0.91
TMEM248-203ENST00000418375 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
TMEM248-203ENST00000418375 HNRNPMP52272 730 aaKnown RBP eCLIP20.72■□□□□ 0.911e-6■■■■■ 30.8
TMEM248-203ENST00000418375 HSPA2P54652 639 aa20.72■□□□□ 0.91
TMEM248-203ENST00000418375 SAMD9LQ8IVG5 1584 aa20.72■□□□□ 0.91
TMEM248-203ENST00000418375 KIAA1107Q9UPP5 1409 aa20.71■□□□□ 0.91
TMEM248-203ENST00000418375 SYCP2Q9BX26 1530 aa20.7■□□□□ 0.9
TMEM248-203ENST00000418375 CEBPAP49715 358 aaPredicted RBP20.7■□□□□ 0.9
TMEM248-203ENST00000418375 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.9
TMEM248-203ENST00000418375 AGLP35573 1532 aa20.69■□□□□ 0.9
TMEM248-203ENST00000418375 MYOM3Q5VTT5 1437 aa20.69■□□□□ 0.9
TMEM248-203ENST00000418375 ESF1Q9H501 851 aaKnown RBP20.68■□□□□ 0.9
TMEM248-203ENST00000418375 ZNF644Q9H582 1327 aaPredicted RBP20.68■□□□□ 0.9
TMEM248-203ENST00000418375 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
TMEM248-203ENST00000418375 MIA2Q96PC5 1412 aa20.67■□□□□ 0.9
TMEM248-203ENST00000418375 CAMSAP2Q08AD1 1489 aa20.63■□□□□ 0.89
TMEM248-203ENST00000418375 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
TMEM248-203ENST00000418375 MBD5Q9P267 1494 aa20.61■□□□□ 0.89
TMEM248-203ENST00000418375 ATP7AQ04656 1500 aa20.6■□□□□ 0.89
TMEM248-203ENST00000418375 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
TMEM248-203ENST00000418375 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
TMEM248-203ENST00000418375 FGD6Q6ZV73 1430 aa20.58■□□□□ 0.88
TMEM248-203ENST00000418375 PREX1Q8TCU6 1659 aa20.58■□□□□ 0.88
TMEM248-203ENST00000418375 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
TMEM248-203ENST00000418375 A2MP01023 1474 aa20.56■□□□□ 0.88
TMEM248-203ENST00000418375 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
TMEM248-203ENST00000418375 INO80Q9ULG1 1556 aaPredicted RBP20.56■□□□□ 0.88
TMEM248-203ENST00000418375 FBXO41Q8TF61 875 aa20.56■□□□□ 0.88
TMEM248-203ENST00000418375 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
TMEM248-203ENST00000418375 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
TMEM248-203ENST00000418375 ARHGEF5Q12774 1597 aa20.53■□□□□ 0.88
TMEM248-203ENST00000418375 C3P01024 1663 aa20.53■□□□□ 0.88
TMEM248-203ENST00000418375 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
TMEM248-203ENST00000418375 PLXNC1O60486 1568 aa20.52■□□□□ 0.88
TMEM248-203ENST00000418375 TCOF1Q13428 1488 aaKnown RBP20.52■□□□□ 0.88
TMEM248-203ENST00000418375 RTEL1-TNFRSF6BF6WH68 1400 aa20.52■□□□□ 0.87
TMEM248-203ENST00000418375 ZMYM3Q14202 1370 aa20.5■□□□□ 0.87
TMEM248-203ENST00000418375 GGT6Q6P531 493 aa20.5■□□□□ 0.87
TMEM248-203ENST00000418375 SETD1BQ9UPS6 1966 aaKnown RBP20.5■□□□□ 0.87
TMEM248-203ENST00000418375 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
TMEM248-203ENST00000418375 FAM50AQ14320 339 aaKnown RBP20.48■□□□□ 0.87
TMEM248-203ENST00000418375 NPATQ14207 1427 aa20.46■□□□□ 0.87
TMEM248-203ENST00000418375 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
TMEM248-203ENST00000418375 DHX29Q7Z478 1369 aaKnown RBP20.46■□□□□ 0.87
TMEM248-203ENST00000418375 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
TMEM248-203ENST00000418375 MROH2AA6NES4 1674 aa20.45■□□□□ 0.86
TMEM248-203ENST00000418375 ABCC5O15440 1437 aa20.44■□□□□ 0.86
TMEM248-203ENST00000418375 CERKQ8TCT0 537 aa20.43■□□□□ 0.86
TMEM248-203ENST00000418375 DAPK1P53355 1430 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms