RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 DAPK1P53355 1430 aa16.16■□□□□ 0.18
CSPG4P3Y-201ENST00000418188 ROCK1Q13464 1354 aa16.16■□□□□ 0.18
CSPG4P3Y-201ENST00000418188 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
CSPG4P3Y-201ENST00000418188 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 POLR3GLQ9BT43 218 aa16.14■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 GCC2Q8IWJ2 1684 aa16.13■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 ABCC5O15440 1437 aa16.12■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 PLEKHD1A6NEE1 506 aa16.11■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 ANKRD30BQ9BXX2 1392 aa16.09■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 TROQ12816 1431 aaPredicted RBP16.08■□□□□ 0.17
CSPG4P3Y-201ENST00000418188 PRG4Q92954 1404 aaPredicted RBP16.08■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 CNTLNQ9NXG0 1405 aa16.08■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 JPH4Q96JJ6 628 aa16.08■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 KDM6BO15054 1643 aa16.08■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 KDM5BQ9UGL1 1544 aa16.07■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 RPRD2Q5VT52 1461 aaKnown RBP16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 RAPGEF6Q8TEU7 1601 aa16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 ANKRD30AQ9BXX3 1397 aa16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 PRKRIP1Q9H875 184 aaPredicted RBP16.06■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 PKD2Q13563 968 aa16.05■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 IRX6P78412 446 aaPredicted RBP16.04■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.16
CSPG4P3Y-201ENST00000418188 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 CAMSAP2Q08AD1 1489 aa16.01■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 SYNJ2O15056 1496 aa16■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 GPATCH8Q9UKJ3 1502 aaKnown RBP15.98■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 NUP155O75694 1391 aa15.98■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
CSPG4P3Y-201ENST00000418188 TEX14Q8IWB6 1497 aa15.96■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 KDM2AQ9Y2K7 1162 aa15.95■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 CARD11Q9BXL7 1154 aa15.94■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 USP47Q96K76 1375 aa15.94■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 ITSN2Q9NZM3 1697 aa15.93■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 ZBED9Q6R2W3 1325 aa15.92■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 PZPP20742 1482 aa15.92■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 ANP32EQ9BTT0 268 aa15.92■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 HNRNPMP52272 730 aaKnown RBP eCLIP15.91■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 PPP4R2Q9NY27 417 aa15.91■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.14
CSPG4P3Y-201ENST00000418188 SPATA31E1Q6ZUB1 1445 aa15.89■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 ADGRL2O95490 1459 aa15.88■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 KIF14Q15058 1648 aa15.88■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 NUP160Q12769 1436 aa15.87■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 PTPRGP23470 1445 aa15.87■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 ROCK2O75116 1388 aaKnown RBP15.85■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 ATP10BO94823 1461 aa15.84■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 RSPH4AQ5TD94 716 aa15.84■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 ADGBQ8N7X0 1667 aa15.84■□□□□ 0.13
CSPG4P3Y-201ENST00000418188 ST20-MTHFSA0A0A6YYL1 179 aa15.82■□□□□ 0.12
CSPG4P3Y-201ENST00000418188 RGL3Q3MIN7 710 aa15.82■□□□□ 0.12
CSPG4P3Y-201ENST00000418188 B4GALNT3Q6L9W6 998 aa15.81■□□□□ 0.12
CSPG4P3Y-201ENST00000418188 SHANK2Q9UPX8 1470 aa15.8■□□□□ 0.12
CSPG4P3Y-201ENST00000418188 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
CSPG4P3Y-201ENST00000418188 SENP3-EIF4A1A0A087X0R7 540 aa15.77■□□□□ 0.12
CSPG4P3Y-201ENST00000418188 MBD5Q9P267 1494 aa15.77■□□□□ 0.12
CSPG4P3Y-201ENST00000418188 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 NUDCQ9Y266 331 aa15.77■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 ABCA8O94911 1581 aa15.76■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 CCDC144AA2RUR9 1427 aa15.76■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 CCDC141Q6ZP82 1450 aa15.75■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 RALBP1Q15311 655 aa15.75■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 CROCC2H7BZ55 1655 aa15.74■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 ARHGEF12Q9NZN5 1544 aa15.73■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 PNISRQ8TF01 805 aaKnown RBP15.72■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
CSPG4P3Y-201ENST00000418188 SMG6Q86US8 1419 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms