RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
SMPD4P1-201ENST00000416717 ABCC5O15440 1437 aa15.67■□□□□ 0.1
SMPD4P1-201ENST00000416717 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
SMPD4P1-201ENST00000416717 GCC2Q8IWJ2 1684 aa15.65■□□□□ 0.1
SMPD4P1-201ENST00000416717 KDM6BO15054 1643 aa15.65■□□□□ 0.1
SMPD4P1-201ENST00000416717 CDC42BPBQ9Y5S2 1711 aa15.64■□□□□ 0.09
SMPD4P1-201ENST00000416717 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
SMPD4P1-201ENST00000416717 UHRF1BP1LA0JNW5 1464 aa15.64■□□□□ 0.09
SMPD4P1-201ENST00000416717 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
SMPD4P1-201ENST00000416717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMPD4P1-201ENST00000416717 NEUROD1Q13562 356 aa15.61■□□□□ 0.09
SMPD4P1-201ENST00000416717 TRIM52Q96A61 297 aa15.61■□□□□ 0.09
SMPD4P1-201ENST00000416717 SIN3AQ96ST3 1273 aa15.61■□□□□ 0.09
SMPD4P1-201ENST00000416717 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
SMPD4P1-201ENST00000416717 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.09
SMPD4P1-201ENST00000416717 CROCC2H7BZ55 1655 aa15.6■□□□□ 0.09
SMPD4P1-201ENST00000416717 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
SMPD4P1-201ENST00000416717 AKNAQ7Z591 1439 aa15.58■□□□□ 0.09
SMPD4P1-201ENST00000416717 ARHGAP5Q13017 1502 aa15.58■□□□□ 0.08
SMPD4P1-201ENST00000416717 ADGBQ8N7X0 1667 aa15.58■□□□□ 0.08
SMPD4P1-201ENST00000416717 SAMD9LQ8IVG5 1584 aa15.57■□□□□ 0.08
SMPD4P1-201ENST00000416717 ROCK1Q13464 1354 aa15.57■□□□□ 0.08
SMPD4P1-201ENST00000416717 NCOA1Q15788 1441 aa15.53■□□□□ 0.08
SMPD4P1-201ENST00000416717 TSPY4P0CV99 314 aa15.52■□□□□ 0.08
SMPD4P1-201ENST00000416717 TSPY10P0CW01 314 aa15.52■□□□□ 0.08
SMPD4P1-201ENST00000416717 C9orf84Q5VXU9 1444 aa15.52■□□□□ 0.08
SMPD4P1-201ENST00000416717 SYCP2Q9BX26 1530 aa15.52■□□□□ 0.07
SMPD4P1-201ENST00000416717 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
SMPD4P1-201ENST00000416717 ANKRD30AQ9BXX3 1397 aa15.51■□□□□ 0.07
SMPD4P1-201ENST00000416717 WDR7Q9Y4E6 1490 aa15.51■□□□□ 0.07
SMPD4P1-201ENST00000416717 MBD5Q9P267 1494 aa15.51■□□□□ 0.07
SMPD4P1-201ENST00000416717 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMPD4P1-201ENST00000416717 FOXD1Q16676 465 aa15.5■□□□□ 0.07
SMPD4P1-201ENST00000416717 ARHGEF5Q12774 1597 aa15.49■□□□□ 0.07
SMPD4P1-201ENST00000416717 ADGRL2O95490 1459 aa15.49■□□□□ 0.07
SMPD4P1-201ENST00000416717 MPHOSPH9Q99550 1183 aa15.49■□□□□ 0.07
SMPD4P1-201ENST00000416717 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
SMPD4P1-201ENST00000416717 PLCH2O75038 1416 aa15.48■□□□□ 0.07
SMPD4P1-201ENST00000416717 CCDC141Q6ZP82 1450 aa15.48■□□□□ 0.07
SMPD4P1-201ENST00000416717 DENND4BO75064 1496 aaPredicted RBP15.47■□□□□ 0.07
SMPD4P1-201ENST00000416717 SHANK2Q9UPX8 1470 aa15.47■□□□□ 0.07
SMPD4P1-201ENST00000416717 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.07
SMPD4P1-201ENST00000416717 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
SMPD4P1-201ENST00000416717 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
SMPD4P1-201ENST00000416717 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
SMPD4P1-201ENST00000416717 ARHGEF12Q9NZN5 1544 aa15.44■□□□□ 0.06
SMPD4P1-201ENST00000416717 KIF15Q9NS87 1388 aa15.44■□□□□ 0.06
SMPD4P1-201ENST00000416717 RSPH4AQ5TD94 716 aa15.42■□□□□ 0.06
SMPD4P1-201ENST00000416717 DIEXFQ68CQ4 756 aaKnown RBP15.42■□□□□ 0.06
SMPD4P1-201ENST00000416717 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
SMPD4P1-201ENST00000416717 PLEKHH2Q8IVE3 1493 aa15.42■□□□□ 0.06
SMPD4P1-201ENST00000416717 ABCA9Q8IUA7 1624 aa15.41■□□□□ 0.06
SMPD4P1-201ENST00000416717 KIAA1107Q9UPP5 1409 aa15.4■□□□□ 0.06
SMPD4P1-201ENST00000416717 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
SMPD4P1-201ENST00000416717 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
SMPD4P1-201ENST00000416717 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
SMPD4P1-201ENST00000416717 ABCC1P33527 1531 aa15.4■□□□□ 0.06
SMPD4P1-201ENST00000416717 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
SMPD4P1-201ENST00000416717 PZPP20742 1482 aa15.39■□□□□ 0.05
SMPD4P1-201ENST00000416717 FANCAO15360 1455 aa15.39■□□□□ 0.05
SMPD4P1-201ENST00000416717 AFAP1Q8N556 730 aa15.38■□□□□ 0.05
SMPD4P1-201ENST00000416717 NUP155O75694 1391 aa15.37■□□□□ 0.05
SMPD4P1-201ENST00000416717 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
SMPD4P1-201ENST00000416717 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
SMPD4P1-201ENST00000416717 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
SMPD4P1-201ENST00000416717 ACIN1Q9UKV3 1341 aaKnown RBP15.36■□□□□ 0.05
SMPD4P1-201ENST00000416717 ARAP3Q8WWN8 1544 aa15.35■□□□□ 0.05
SMPD4P1-201ENST00000416717 PKD2Q13563 968 aa15.35■□□□□ 0.05
SMPD4P1-201ENST00000416717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMPD4P1-201ENST00000416717 MYT1LQ9UL68 1186 aa15.34■□□□□ 0.05
SMPD4P1-201ENST00000416717 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
SMPD4P1-201ENST00000416717 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.04
SMPD4P1-201ENST00000416717 PLXNC1O60486 1568 aa15.33■□□□□ 0.04
SMPD4P1-201ENST00000416717 ADGRL1O94910 1474 aa15.32■□□□□ 0.04
SMPD4P1-201ENST00000416717 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
SMPD4P1-201ENST00000416717 SCAPERQ9BY12 1400 aa15.31■□□□□ 0.04
SMPD4P1-201ENST00000416717 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
SMPD4P1-201ENST00000416717 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
SMPD4P1-201ENST00000416717 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
SMPD4P1-201ENST00000416717 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
SMPD4P1-201ENST00000416717 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.04
SMPD4P1-201ENST00000416717 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.03
SMPD4P1-201ENST00000416717 FAM135AQ9P2D6 1515 aa15.26■□□□□ 0.03
SMPD4P1-201ENST00000416717 ATP7AQ04656 1500 aa15.25■□□□□ 0.03
SMPD4P1-201ENST00000416717 UNC13BO14795 1591 aa15.25■□□□□ 0.03
SMPD4P1-201ENST00000416717 ERBINQ96RT1 1412 aa15.23■□□□□ 0.03
SMPD4P1-201ENST00000416717 INO80Q9ULG1 1556 aaPredicted RBP15.23■□□□□ 0.03
SMPD4P1-201ENST00000416717 RTEL1-TNFRSF6BF6WH68 1400 aa15.23■□□□□ 0.03
SMPD4P1-201ENST00000416717 CFAP74Q9C0B2 1584 aa15.22■□□□□ 0.03
SMPD4P1-201ENST00000416717 TEX14Q8IWB6 1497 aa15.21■□□□□ 0.02
SMPD4P1-201ENST00000416717 TSPOAP1O95153 1857 aa15.21■□□□□ 0.02
SMPD4P1-201ENST00000416717 KIDINS220Q9ULH0 1771 aa15.2■□□□□ 0.02
SMPD4P1-201ENST00000416717 IQGAP3Q86VI3 1631 aa15.2■□□□□ 0.02
SMPD4P1-201ENST00000416717 FAM69CQ0P6D2 419 aa15.19■□□□□ 0.02
SMPD4P1-201ENST00000416717 ZNF518AQ6AHZ1 1483 aa15.19■□□□□ 0.02
SMPD4P1-201ENST00000416717 MIER1Q8N108 512 aa15.19■□□□□ 0.02
SMPD4P1-201ENST00000416717 MAP3K4Q9Y6R4 1608 aa15.18■□□□□ 0.02
SMPD4P1-201ENST00000416717 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
SMPD4P1-201ENST00000416717 ZNF326Q5BKZ1 582 aaKnown RBP15.18■□□□□ 0.02
SMPD4P1-201ENST00000416717 KIF3BO15066 747 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms