RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 AKNAQ7Z591 1439 aa19.57■□□□□ 0.72
PTPN6-203ENST00000416215 CAMSAP2Q08AD1 1489 aa19.56■□□□□ 0.72
PTPN6-203ENST00000416215 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
PTPN6-203ENST00000416215 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
PTPN6-203ENST00000416215 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
PTPN6-203ENST00000416215 ABCC10Q5T3U5 1492 aa19.54■□□□□ 0.72
PTPN6-203ENST00000416215 ROCK1Q13464 1354 aa19.52■□□□□ 0.72
PTPN6-203ENST00000416215 CDC42BPAQ5VT25 1732 aa19.51■□□□□ 0.71
PTPN6-203ENST00000416215 TIMELESSQ9UNS1 1208 aa19.5■□□□□ 0.71
PTPN6-203ENST00000416215 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
PTPN6-203ENST00000416215 ABCC2Q92887 1545 aa19.46■□□□□ 0.71
PTPN6-203ENST00000416215 MPHOSPH9Q99550 1183 aa19.46■□□□□ 0.71
PTPN6-203ENST00000416215 PPP1R15AO75807 674 aaPredicted RBP19.45■□□□□ 0.7
PTPN6-203ENST00000416215 NCOA1Q15788 1441 aa19.44■□□□□ 0.7
PTPN6-203ENST00000416215 MIER1Q8N108 512 aa19.43■□□□□ 0.7
PTPN6-203ENST00000416215 TONSLQ96HA7 1378 aa19.42■□□□□ 0.7
PTPN6-203ENST00000416215 FOXD1Q16676 465 aa19.42■□□□□ 0.7
PTPN6-203ENST00000416215 HNRNPMP52272 730 aaKnown RBP eCLIP19.42■□□□□ 0.7
PTPN6-203ENST00000416215 KCNH8Q96L42 1107 aa19.41■□□□□ 0.7
PTPN6-203ENST00000416215 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
PTPN6-203ENST00000416215 ADGBQ8N7X0 1667 aa19.38■□□□□ 0.69
PTPN6-203ENST00000416215 CDC42BPBQ9Y5S2 1711 aa19.38■□□□□ 0.69
PTPN6-203ENST00000416215 ADGRL2O95490 1459 aa19.38■□□□□ 0.69
PTPN6-203ENST00000416215 ANKRD30AQ9BXX3 1397 aa19.37■□□□□ 0.69
PTPN6-203ENST00000416215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.36■□□□□ 0.69
PTPN6-203ENST00000416215 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
PTPN6-203ENST00000416215 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
PTPN6-203ENST00000416215 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
PTPN6-203ENST00000416215 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
PTPN6-203ENST00000416215 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
PTPN6-203ENST00000416215 ZCCHC11Q5TAX3 1644 aaKnown RBP19.35■□□□□ 0.69
PTPN6-203ENST00000416215 PREX2Q70Z35 1606 aa19.35■□□□□ 0.69
PTPN6-203ENST00000416215 UHRF1BP1LA0JNW5 1464 aa19.35■□□□□ 0.69
PTPN6-203ENST00000416215 MBD5Q9P267 1494 aa19.34■□□□□ 0.69
PTPN6-203ENST00000416215 ACIN1Q9UKV3 1341 aaKnown RBP19.34■□□□□ 0.69
PTPN6-203ENST00000416215 SAMD9LQ8IVG5 1584 aa19.34■□□□□ 0.69
PTPN6-203ENST00000416215 KDM5BQ9UGL1 1544 aa19.33■□□□□ 0.68
PTPN6-203ENST00000416215 HIRIP3Q9BW71 556 aaPredicted RBP19.31■□□□□ 0.68
PTPN6-203ENST00000416215 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
PTPN6-203ENST00000416215 ANKRD50Q9ULJ7 1429 aa19.31■□□□□ 0.68
PTPN6-203ENST00000416215 SHANK2Q9UPX8 1470 aa19.31■□□□□ 0.68
PTPN6-203ENST00000416215 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
PTPN6-203ENST00000416215 ARHGEF5Q12774 1597 aa19.29■□□□□ 0.68
PTPN6-203ENST00000416215 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
PTPN6-203ENST00000416215 PZPP20742 1482 aa19.29■□□□□ 0.68
PTPN6-203ENST00000416215 CCDC141Q6ZP82 1450 aa19.27■□□□□ 0.67
PTPN6-203ENST00000416215 MYO5CQ9NQX4 1742 aa19.26■□□□□ 0.67
PTPN6-203ENST00000416215 RSPH4AQ5TD94 716 aa19.26■□□□□ 0.67
PTPN6-203ENST00000416215 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
PTPN6-203ENST00000416215 KIF15Q9NS87 1388 aa19.25■□□□□ 0.67
PTPN6-203ENST00000416215 L3MBTL2Q969R5 705 aa19.24■□□□□ 0.67
PTPN6-203ENST00000416215 PLCH2O75038 1416 aa19.23■□□□□ 0.67
PTPN6-203ENST00000416215 PKD2Q13563 968 aa19.22■□□□□ 0.67
PTPN6-203ENST00000416215 NUP155O75694 1391 aa19.21■□□□□ 0.67
PTPN6-203ENST00000416215 YTHDC1Q96MU7 727 aaKnown RBP19.21■□□□□ 0.67
PTPN6-203ENST00000416215 RPRD2Q5VT52 1461 aaKnown RBP19.21■□□□□ 0.67
PTPN6-203ENST00000416215 ARHGEF12Q9NZN5 1544 aa19.2■□□□□ 0.66
PTPN6-203ENST00000416215 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
PTPN6-203ENST00000416215 DDX10Q13206 875 aaKnown RBP19.19■□□□□ 0.66
PTPN6-203ENST00000416215 KIAA1107Q9UPP5 1409 aa19.19■□□□□ 0.66
PTPN6-203ENST00000416215 PLEKHH2Q8IVE3 1493 aa19.17■□□□□ 0.66
PTPN6-203ENST00000416215 WDR7Q9Y4E6 1490 aa19.15■□□□□ 0.66
PTPN6-203ENST00000416215 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
PTPN6-203ENST00000416215 MAST1Q9Y2H9 1570 aa19.13■□□□□ 0.65
PTPN6-203ENST00000416215 TEX14Q8IWB6 1497 aa19.13■□□□□ 0.65
PTPN6-203ENST00000416215 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
PTPN6-203ENST00000416215 TRAPPC8Q9Y2L5 1435 aa19.11■□□□□ 0.65
PTPN6-203ENST00000416215 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
PTPN6-203ENST00000416215 ASXL2Q76L83 1435 aa19.1■□□□□ 0.65
PTPN6-203ENST00000416215 ABCC1P33527 1531 aa19.1■□□□□ 0.65
PTPN6-203ENST00000416215 HSPA5P11021 654 aaKnown RBP19.09■□□□□ 0.65
PTPN6-203ENST00000416215 AFAP1Q8N556 730 aa19.09■□□□□ 0.65
PTPN6-203ENST00000416215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTPN6-203ENST00000416215 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTPN6-203ENST00000416215 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
PTPN6-203ENST00000416215 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
PTPN6-203ENST00000416215 FAM135AQ9P2D6 1515 aa19.05■□□□□ 0.64
PTPN6-203ENST00000416215 ARAP3Q8WWN8 1544 aa19.05■□□□□ 0.64
PTPN6-203ENST00000416215 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
PTPN6-203ENST00000416215 ABCA9Q8IUA7 1624 aa19.04■□□□□ 0.64
PTPN6-203ENST00000416215 FANCAO15360 1455 aa19.03■□□□□ 0.64
PTPN6-203ENST00000416215 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
PTPN6-203ENST00000416215 DUOX2Q9NRD8 1548 aa19.03■□□□□ 0.64
PTPN6-203ENST00000416215 UNC13BO14795 1591 aa19■□□□□ 0.63
PTPN6-203ENST00000416215 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
PTPN6-203ENST00000416215 ERBINQ96RT1 1412 aa18.98■□□□□ 0.63
PTPN6-203ENST00000416215 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
PTPN6-203ENST00000416215 SCAPERQ9BY12 1400 aa18.97■□□□□ 0.63
PTPN6-203ENST00000416215 RTEL1-TNFRSF6BF6WH68 1400 aa18.96■□□□□ 0.63
PTPN6-203ENST00000416215 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
PTPN6-203ENST00000416215 ZFYVE16Q7Z3T8 1539 aa18.95■□□□□ 0.62
PTPN6-203ENST00000416215 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
PTPN6-203ENST00000416215 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
PTPN6-203ENST00000416215 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
PTPN6-203ENST00000416215 IQGAP3Q86VI3 1631 aa18.94■□□□□ 0.62
PTPN6-203ENST00000416215 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
PTPN6-203ENST00000416215 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
PTPN6-203ENST00000416215 MAGI2Q86UL8 1455 aa18.92■□□□□ 0.62
PTPN6-203ENST00000416215 ANP32CO43423 234 aa18.92■□□□□ 0.62
PTPN6-203ENST00000416215 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms