RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 WASHC2CQ9Y4E1 1318 aa10.49□□□□□ -0.73
SIK3-203ENST00000415541 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
SIK3-203ENST00000415541 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
SIK3-203ENST00000415541 LRRC9Q6ZRR7 1453 aa10.49□□□□□ -0.73
SIK3-203ENST00000415541 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
SIK3-203ENST00000415541 TIAM1Q13009 1591 aa10.48□□□□□ -0.73
SIK3-203ENST00000415541 HNRNPMP52272 730 aaKnown RBP eCLIP10.48□□□□□ -0.739e-7■■■■■ 27.5
SIK3-203ENST00000415541 CASKIN1Q8WXD9 1431 aa10.47□□□□□ -0.73
SIK3-203ENST00000415541 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
SIK3-203ENST00000415541 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
SIK3-203ENST00000415541 RGL3Q3MIN7 710 aa10.47□□□□□ -0.73
SIK3-203ENST00000415541 MAP3K1Q13233 1512 aa10.46□□□□□ -0.73
SIK3-203ENST00000415541 TIMELESSQ9UNS1 1208 aa10.46□□□□□ -0.74
SIK3-203ENST00000415541 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
SIK3-203ENST00000415541 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
SIK3-203ENST00000415541 SENP3Q9H4L4 574 aaPredicted RBP10.44□□□□□ -0.74
SIK3-203ENST00000415541 FAM43AQ8N2R8 423 aa10.44□□□□□ -0.74
SIK3-203ENST00000415541 GSE1Q14687 1217 aa10.44□□□□□ -0.74
SIK3-203ENST00000415541 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
SIK3-203ENST00000415541 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
SIK3-203ENST00000415541 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
SIK3-203ENST00000415541 PRG4Q92954 1404 aaPredicted RBP10.42□□□□□ -0.74
SIK3-203ENST00000415541 CFAP43Q8NDM7 1665 aa10.42□□□□□ -0.74
SIK3-203ENST00000415541 PLPPR3Q6T4P5 718 aa10.42□□□□□ -0.74
SIK3-203ENST00000415541 FGD6Q6ZV73 1430 aa10.41□□□□□ -0.74
SIK3-203ENST00000415541 MPHOSPH9Q99550 1183 aa10.41□□□□□ -0.74
SIK3-203ENST00000415541 FYCO1Q9BQS8 1478 aa10.41□□□□□ -0.74
SIK3-203ENST00000415541 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
SIK3-203ENST00000415541 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
SIK3-203ENST00000415541 KIAA0586Q9BVV6 1533 aa10.41□□□□□ -0.74
SIK3-203ENST00000415541 PCF11O94913 1555 aaKnown RBP10.41□□□□□ -0.74
SIK3-203ENST00000415541 EFCAB5A4FU69 1503 aa10.4□□□□□ -0.74
SIK3-203ENST00000415541 CYB5RLQ6IPT4 315 aa10.4□□□□□ -0.74
SIK3-203ENST00000415541 NCOA2Q15596 1464 aa10.4□□□□□ -0.74
SIK3-203ENST00000415541 PKD2Q13563 968 aa10.4□□□□□ -0.75
SIK3-203ENST00000415541 CUL7Q14999 1698 aa10.4□□□□□ -0.75
SIK3-203ENST00000415541 GRIN2AQ12879 1464 aa10.39□□□□□ -0.75
SIK3-203ENST00000415541 EFCAB2Q5VUJ9 269 aa10.39□□□□□ -0.75
SIK3-203ENST00000415541 MYOM3Q5VTT5 1437 aa10.38□□□□□ -0.75
SIK3-203ENST00000415541 HSP90AA2PQ14568 343 aaPredicted RBP10.38□□□□□ -0.75
SIK3-203ENST00000415541 SYNJ2O15056 1496 aa10.37□□□□□ -0.75
SIK3-203ENST00000415541 CDK13Q14004 1512 aaKnown RBP10.37□□□□□ -0.75
SIK3-203ENST00000415541 IQGAP2Q13576 1575 aa10.37□□□□□ -0.75
SIK3-203ENST00000415541 EIF4G2P78344 907 aaKnown RBP eCLIP10.37□□□□□ -0.75
SIK3-203ENST00000415541 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
SIK3-203ENST00000415541 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
SIK3-203ENST00000415541 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
SIK3-203ENST00000415541 RRP9O43818 475 aaKnown RBP10.36□□□□□ -0.75
SIK3-203ENST00000415541 PLB1Q6P1J6 1458 aa10.36□□□□□ -0.75
SIK3-203ENST00000415541 NUP155O75694 1391 aa10.35□□□□□ -0.75
SIK3-203ENST00000415541 HSP90AA1P07900 732 aaKnown RBP10.35□□□□□ -0.75
SIK3-203ENST00000415541 ANKRD30AQ9BXX3 1397 aa10.34□□□□□ -0.75
SIK3-203ENST00000415541 MAGI1Q96QZ7 1491 aaPredicted RBP10.34□□□□□ -0.75
SIK3-203ENST00000415541 ESF1Q9H501 851 aaKnown RBP10.33□□□□□ -0.76
SIK3-203ENST00000415541 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
SIK3-203ENST00000415541 DCAF11Q8TEB1 546 aa10.32□□□□□ -0.76
SIK3-203ENST00000415541 GGT6Q6P531 493 aa10.32□□□□□ -0.76
SIK3-203ENST00000415541 L3MBTL2Q969R5 705 aa10.32□□□□□ -0.76
SIK3-203ENST00000415541 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
SIK3-203ENST00000415541 CTTNBP2Q8WZ74 1663 aa10.3□□□□□ -0.76
SIK3-203ENST00000415541 NAP1L5Q96NT1 182 aaPredicted RBP10.3□□□□□ -0.76
SIK3-203ENST00000415541 SPAG9O60271 1321 aaKnown RBP10.3□□□□□ -0.76
SIK3-203ENST00000415541 LRRIQ1Q96JM4 1722 aa10.3□□□□□ -0.76
SIK3-203ENST00000415541 KIF3BO15066 747 aa10.29□□□□□ -0.76
SIK3-203ENST00000415541 CARD11Q9BXL7 1154 aa10.29□□□□□ -0.76
SIK3-203ENST00000415541 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
SIK3-203ENST00000415541 FRAT1Q92837 279 aaPredicted RBP10.29□□□□□ -0.76
SIK3-203ENST00000415541 WDR62O43379 1518 aa10.28□□□□□ -0.76
SIK3-203ENST00000415541 TROQ12816 1431 aaPredicted RBP10.28□□□□□ -0.76
SIK3-203ENST00000415541 MLECQ14165 292 aa10.28□□□□□ -0.76
SIK3-203ENST00000415541 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
SIK3-203ENST00000415541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.28□□□□□ -0.769e-14■■■■□ 20.6
SIK3-203ENST00000415541 FAM9BQ8IZU0 186 aa10.27□□□□□ -0.76
SIK3-203ENST00000415541 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
SIK3-203ENST00000415541 SENP3-EIF4A1A0A087X0R7 540 aa10.26□□□□□ -0.77
SIK3-203ENST00000415541 HSPA5P11021 654 aaKnown RBP10.26□□□□□ -0.77
SIK3-203ENST00000415541 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
SIK3-203ENST00000415541 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
SIK3-203ENST00000415541 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
SIK3-203ENST00000415541 TARBP1Q13395 1621 aaKnown RBP10.26□□□□□ -0.77
SIK3-203ENST00000415541 ADAMTS12P58397 1594 aa10.26□□□□□ -0.77
SIK3-203ENST00000415541 PTPRKQ15262 1439 aa10.26□□□□□ -0.77
SIK3-203ENST00000415541 NFKBIBQ15653 356 aa10.26□□□□□ -0.77
SIK3-203ENST00000415541 HECW1Q76N89 1606 aa10.25□□□□□ -0.77
SIK3-203ENST00000415541 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
SIK3-203ENST00000415541 EHBP1L1Q8N3D4 1523 aa10.25□□□□□ -0.77
SIK3-203ENST00000415541 SAMD9Q5K651 1589 aa10.25□□□□□ -0.77
SIK3-203ENST00000415541 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
SIK3-203ENST00000415541 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
SIK3-203ENST00000415541 L1TD1Q5T7N2 865 aaKnown RBP10.25□□□□□ -0.77
SIK3-203ENST00000415541 ZBED9Q6R2W3 1325 aa10.24□□□□□ -0.77
SIK3-203ENST00000415541 PDE4CQ08493 712 aa10.24□□□□□ -0.77
SIK3-203ENST00000415541 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
SIK3-203ENST00000415541 KIF15Q9NS87 1388 aa10.23□□□□□ -0.77
SIK3-203ENST00000415541 MS4A1P11836 297 aa10.22□□□□□ -0.77
SIK3-203ENST00000415541 RBM10P98175 930 aaKnown RBP10.22□□□□□ -0.77
SIK3-203ENST00000415541 KDM5BQ9UGL1 1544 aa10.22□□□□□ -0.77
SIK3-203ENST00000415541 ARHGEF11O15085 1522 aa10.22□□□□□ -0.77
SIK3-203ENST00000415541 PDE4AP27815 886 aa10.22□□□□□ -0.77
SIK3-203ENST00000415541 MRS2Q9HD23 443 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms