RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 DENND4BO75064 1496 aaPredicted RBP22.24■■□□□ 1.15
LRCH3-202ENST00000414675 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
LRCH3-202ENST00000414675 CFDP1Q9UEE9 299 aaPredicted RBP22.22■■□□□ 1.15
LRCH3-202ENST00000414675 ROCK1Q13464 1354 aa22.22■■□□□ 1.15
LRCH3-202ENST00000414675 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
LRCH3-202ENST00000414675 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
LRCH3-202ENST00000414675 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
LRCH3-202ENST00000414675 ABCC10Q5T3U5 1492 aa22.2■■□□□ 1.14
LRCH3-202ENST00000414675 PPP1R15AO75807 674 aaPredicted RBP22.18■■□□□ 1.14
LRCH3-202ENST00000414675 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
LRCH3-202ENST00000414675 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
LRCH3-202ENST00000414675 CROCC2H7BZ55 1655 aa22.14■■□□□ 1.13
LRCH3-202ENST00000414675 TONSLQ96HA7 1378 aa22.14■■□□□ 1.13
LRCH3-202ENST00000414675 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
LRCH3-202ENST00000414675 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
LRCH3-202ENST00000414675 ADGBQ8N7X0 1667 aa22.12■■□□□ 1.13
LRCH3-202ENST00000414675 MPHOSPH9Q99550 1183 aa22.11■■□□□ 1.13
LRCH3-202ENST00000414675 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
LRCH3-202ENST00000414675 NCOA1Q15788 1441 aa22.09■■□□□ 1.13
LRCH3-202ENST00000414675 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
LRCH3-202ENST00000414675 ADGRL2O95490 1459 aa22.07■■□□□ 1.12
LRCH3-202ENST00000414675 FOXD1Q16676 465 aa22.06■■□□□ 1.12
LRCH3-202ENST00000414675 ABCC2Q92887 1545 aa22.05■■□□□ 1.12
LRCH3-202ENST00000414675 CENPBP07199 599 aaPredicted RBP22.04■■□□□ 1.12
LRCH3-202ENST00000414675 CDC42BPBQ9Y5S2 1711 aa22.03■■□□□ 1.12
LRCH3-202ENST00000414675 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
LRCH3-202ENST00000414675 PREX2Q70Z35 1606 aa22.01■■□□□ 1.11
LRCH3-202ENST00000414675 HIRIP3Q9BW71 556 aaPredicted RBP21.99■■□□□ 1.11
LRCH3-202ENST00000414675 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
LRCH3-202ENST00000414675 PZPP20742 1482 aa21.99■■□□□ 1.11
LRCH3-202ENST00000414675 SHANK2Q9UPX8 1470 aa21.99■■□□□ 1.11
LRCH3-202ENST00000414675 ANKRD30AQ9BXX3 1397 aa21.99■■□□□ 1.11
LRCH3-202ENST00000414675 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
LRCH3-202ENST00000414675 C9orf84Q5VXU9 1444 aa21.98■■□□□ 1.11
LRCH3-202ENST00000414675 ANKRD30BQ9BXX2 1392 aa21.98■■□□□ 1.11
LRCH3-202ENST00000414675 MBD5Q9P267 1494 aa21.96■■□□□ 1.11
LRCH3-202ENST00000414675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.111e-6■■■■□ 23.9
LRCH3-202ENST00000414675 ARHGEF5Q12774 1597 aa21.96■■□□□ 1.11
LRCH3-202ENST00000414675 HNRNPMP52272 730 aaKnown RBP eCLIP21.96■■□□□ 1.11
LRCH3-202ENST00000414675 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
LRCH3-202ENST00000414675 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
LRCH3-202ENST00000414675 ZCCHC11Q5TAX3 1644 aaKnown RBP21.93■■□□□ 1.1
LRCH3-202ENST00000414675 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
LRCH3-202ENST00000414675 RPRD2Q5VT52 1461 aaKnown RBP21.91■■□□□ 1.1
LRCH3-202ENST00000414675 UHRF1BP1LA0JNW5 1464 aa21.91■■□□□ 1.1
LRCH3-202ENST00000414675 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
LRCH3-202ENST00000414675 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
LRCH3-202ENST00000414675 TSPY4P0CV99 314 aa21.89■■□□□ 1.09
LRCH3-202ENST00000414675 TSPY10P0CW01 314 aa21.89■■□□□ 1.09
LRCH3-202ENST00000414675 MYO5CQ9NQX4 1742 aa21.88■■□□□ 1.09
LRCH3-202ENST00000414675 CCDC141Q6ZP82 1450 aa21.88■■□□□ 1.09
LRCH3-202ENST00000414675 ARHGAP5Q13017 1502 aa21.88■■□□□ 1.09
LRCH3-202ENST00000414675 SYCP2Q9BX26 1530 aa21.87■■□□□ 1.09
LRCH3-202ENST00000414675 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
LRCH3-202ENST00000414675 KCNH8Q96L42 1107 aa21.86■■□□□ 1.09
LRCH3-202ENST00000414675 KIF15Q9NS87 1388 aa21.86■■□□□ 1.09
LRCH3-202ENST00000414675 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
LRCH3-202ENST00000414675 PKD2Q13563 968 aa21.82■■□□□ 1.08
LRCH3-202ENST00000414675 NUP155O75694 1391 aa21.8■■□□□ 1.08
LRCH3-202ENST00000414675 KDM5DQ9BY66 1539 aa21.8■■□□□ 1.08
LRCH3-202ENST00000414675 RSPH4AQ5TD94 716 aa21.78■■□□□ 1.08
LRCH3-202ENST00000414675 ARHGEF12Q9NZN5 1544 aa21.78■■□□□ 1.08
LRCH3-202ENST00000414675 MAST1Q9Y2H9 1570 aa21.78■■□□□ 1.08
LRCH3-202ENST00000414675 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
LRCH3-202ENST00000414675 GTF3C3Q9Y5Q9 886 aa21.77■■□□□ 1.08
LRCH3-202ENST00000414675 PLCH2O75038 1416 aa21.77■■□□□ 1.08
LRCH3-202ENST00000414675 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
LRCH3-202ENST00000414675 PLEKHH2Q8IVE3 1493 aa21.74■■□□□ 1.07
LRCH3-202ENST00000414675 PLXNC1O60486 1568 aa21.7■■□□□ 1.07
LRCH3-202ENST00000414675 ABCC1P33527 1531 aa21.69■■□□□ 1.06
LRCH3-202ENST00000414675 EIF4G2P78344 907 aaKnown RBP eCLIP21.69■■□□□ 1.06
LRCH3-202ENST00000414675 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
LRCH3-202ENST00000414675 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
LRCH3-202ENST00000414675 WDR7Q9Y4E6 1490 aa21.67■■□□□ 1.06
LRCH3-202ENST00000414675 WASHC2AQ641Q2 1341 aa21.67■■□□□ 1.06
LRCH3-202ENST00000414675 UNC13BO14795 1591 aa21.66■■□□□ 1.06
LRCH3-202ENST00000414675 TRAPPC8Q9Y2L5 1435 aa21.66■■□□□ 1.06
LRCH3-202ENST00000414675 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
LRCH3-202ENST00000414675 DUOX2Q9NRD8 1548 aa21.61■■□□□ 1.05
LRCH3-202ENST00000414675 SPATA31E1Q6ZUB1 1445 aa21.61■■□□□ 1.05
LRCH3-202ENST00000414675 C11orf95C9JLR9 678 aaPredicted RBP21.6■■□□□ 1.05
LRCH3-202ENST00000414675 ANP32CO43423 234 aa21.6■■□□□ 1.05
LRCH3-202ENST00000414675 ABCA9Q8IUA7 1624 aa21.59■■□□□ 1.05
LRCH3-202ENST00000414675 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
LRCH3-202ENST00000414675 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
LRCH3-202ENST00000414675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.58■■□□□ 1.041e-7■■□□□ 14.2
LRCH3-202ENST00000414675 ASXL2Q76L83 1435 aa21.57■■□□□ 1.04
LRCH3-202ENST00000414675 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
LRCH3-202ENST00000414675 ERBINQ96RT1 1412 aa21.56■■□□□ 1.04
LRCH3-202ENST00000414675 AFAP1Q8N556 730 aa21.55■■□□□ 1.04
LRCH3-202ENST00000414675 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
LRCH3-202ENST00000414675 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
LRCH3-202ENST00000414675 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
LRCH3-202ENST00000414675 PLA2R1Q13018 1463 aa21.54■■□□□ 1.04
LRCH3-202ENST00000414675 CCER2I3L3R5 266 aa21.54■■□□□ 1.04
LRCH3-202ENST00000414675 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
LRCH3-202ENST00000414675 FANCAO15360 1455 aa21.54■■□□□ 1.04
LRCH3-202ENST00000414675 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.04
LRCH3-202ENST00000414675 POLR1AO95602 1720 aaPredicted RBP21.52■■□□□ 1.04
LRCH3-202ENST00000414675 RTEL1-TNFRSF6BF6WH68 1400 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms