RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
HCG27-202ENST00000414008 IGF1RP08069 1367 aa16.18■□□□□ 0.18
HCG27-202ENST00000414008 CHD1O14646 1710 aa16.18■□□□□ 0.18
HCG27-202ENST00000414008 RIOK3O14730 519 aaKnown RBP16.17■□□□□ 0.18
HCG27-202ENST00000414008 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
HCG27-202ENST00000414008 TAOK2Q9UL54 1235 aa16.15■□□□□ 0.18
HCG27-202ENST00000414008 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
HCG27-202ENST00000414008 PDAP1Q13442 181 aaKnown RBP16.13■□□□□ 0.17
HCG27-202ENST00000414008 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
HCG27-202ENST00000414008 BMP2KQ9NSY1 1161 aaPredicted RBP16.13■□□□□ 0.17
HCG27-202ENST00000414008 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
HCG27-202ENST00000414008 ASTLQ6HA08 431 aaPredicted RBP16.12■□□□□ 0.17
HCG27-202ENST00000414008 ATMINO43313 823 aaPredicted RBP16.11■□□□□ 0.17
HCG27-202ENST00000414008 POTEIP0CG38 1075 aa16.11■□□□□ 0.17
HCG27-202ENST00000414008 PSEN1P49768 467 aa16.11■□□□□ 0.17
HCG27-202ENST00000414008 TMEM106CQ9BVX2 250 aa16.11■□□□□ 0.17
HCG27-202ENST00000414008 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
HCG27-202ENST00000414008 TTLL13PA6NNM8 815 aa16.1■□□□□ 0.17
HCG27-202ENST00000414008 RGL2O15211 777 aa16.1■□□□□ 0.17
HCG27-202ENST00000414008 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
HCG27-202ENST00000414008 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
HCG27-202ENST00000414008 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
HCG27-202ENST00000414008 ATN1P54259 1190 aaPredicted RBP16.06■□□□□ 0.16
HCG27-202ENST00000414008 NUP160Q12769 1436 aa16.05■□□□□ 0.16
HCG27-202ENST00000414008 CUL7Q14999 1698 aa16.05■□□□□ 0.16
HCG27-202ENST00000414008 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
HCG27-202ENST00000414008 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
HCG27-202ENST00000414008 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
HCG27-202ENST00000414008 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
HCG27-202ENST00000414008 GOLGA2Q08379 1002 aa15.99■□□□□ 0.15
HCG27-202ENST00000414008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
HCG27-202ENST00000414008 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
HCG27-202ENST00000414008 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
HCG27-202ENST00000414008 EEA1Q15075 1411 aa15.97■□□□□ 0.15
HCG27-202ENST00000414008 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
HCG27-202ENST00000414008 SLC39A7Q92504 469 aa15.97■□□□□ 0.15
HCG27-202ENST00000414008 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
HCG27-202ENST00000414008 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
HCG27-202ENST00000414008 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
HCG27-202ENST00000414008 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
HCG27-202ENST00000414008 JPH4Q96JJ6 628 aa15.96■□□□□ 0.15
HCG27-202ENST00000414008 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
HCG27-202ENST00000414008 PRXQ9BXM0 1461 aa15.93■□□□□ 0.14
HCG27-202ENST00000414008 C7P10643 843 aa15.93■□□□□ 0.14
HCG27-202ENST00000414008 CYB5RLQ6IPT4 315 aa15.93■□□□□ 0.14
HCG27-202ENST00000414008 STK25O00506 426 aa15.91■□□□□ 0.14
HCG27-202ENST00000414008 IER5LQ5T953 404 aa15.91■□□□□ 0.14
HCG27-202ENST00000414008 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
HCG27-202ENST00000414008 MKRN3Q13064 507 aaKnown RBP15.9■□□□□ 0.14
HCG27-202ENST00000414008 METRNQ9UJH8 293 aa15.9■□□□□ 0.14
HCG27-202ENST00000414008 BCL11BQ9C0K0 894 aaPredicted RBP15.89■□□□□ 0.13
HCG27-202ENST00000414008 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
HCG27-202ENST00000414008 STK24Q9Y6E0 443 aa15.88■□□□□ 0.13
HCG27-202ENST00000414008 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
HCG27-202ENST00000414008 SHROOM2Q13796 1616 aa15.87■□□□□ 0.13
HCG27-202ENST00000414008 SEC24BO95487 1268 aa15.85■□□□□ 0.13
HCG27-202ENST00000414008 ERCC6L2Q5T890 1561 aa15.84■□□□□ 0.13
HCG27-202ENST00000414008 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
HCG27-202ENST00000414008 IQGAP2Q13576 1575 aa15.81■□□□□ 0.12
HCG27-202ENST00000414008 HS6ST3Q8IZP7 471 aa15.79■□□□□ 0.12
HCG27-202ENST00000414008 EFCAB3Q8N7B9 438 aa15.79■□□□□ 0.12
HCG27-202ENST00000414008 PLCG2P16885 1265 aa15.78■□□□□ 0.12
HCG27-202ENST00000414008 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.12
HCG27-202ENST00000414008 OCEL1Q9H607 264 aa15.76■□□□□ 0.11
HCG27-202ENST00000414008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.76■□□□□ 0.11
HCG27-202ENST00000414008 UGGT2Q9NYU1 1516 aa15.75■□□□□ 0.11
HCG27-202ENST00000414008 IRX5P78411 483 aaPredicted RBP15.75■□□□□ 0.11
HCG27-202ENST00000414008 KIF21BO75037 1637 aa15.75■□□□□ 0.11
HCG27-202ENST00000414008 SOX12O15370 315 aa15.74■□□□□ 0.11
HCG27-202ENST00000414008 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
HCG27-202ENST00000414008 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
HCG27-202ENST00000414008 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
HCG27-202ENST00000414008 PTPRGP23470 1445 aa15.72■□□□□ 0.11
HCG27-202ENST00000414008 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
HCG27-202ENST00000414008 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
HCG27-202ENST00000414008 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
HCG27-202ENST00000414008 GOLGA3Q08378 1498 aa15.71■□□□□ 0.1
HCG27-202ENST00000414008 POTEFA5A3E0 1075 aa15.69■□□□□ 0.1
HCG27-202ENST00000414008 LHX8Q68G74 356 aa15.68■□□□□ 0.1
HCG27-202ENST00000414008 RANGAP1P46060 587 aaPredicted RBP15.67■□□□□ 0.1
HCG27-202ENST00000414008 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
HCG27-202ENST00000414008 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
HCG27-202ENST00000414008 NLRP6P59044 892 aa15.64■□□□□ 0.09
HCG27-202ENST00000414008 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
HCG27-202ENST00000414008 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
HCG27-202ENST00000414008 PHF8Q9UPP1 1060 aa15.62■□□□□ 0.09
HCG27-202ENST00000414008 POTEB2H3BUK9 544 aa15.6■□□□□ 0.09
HCG27-202ENST00000414008 UACAQ9BZF9 1416 aa15.6■□□□□ 0.09
HCG27-202ENST00000414008 MFRPQ9BY79 579 aa15.59■□□□□ 0.09
HCG27-202ENST00000414008 L3MBTL3Q96JM7 780 aaPredicted RBP15.58■□□□□ 0.08
HCG27-202ENST00000414008 ADCY10Q96PN6 1610 aa15.57■□□□□ 0.08
HCG27-202ENST00000414008 MAMSTRQ6ZN01 415 aa15.56■□□□□ 0.08
HCG27-202ENST00000414008 UHRF1BP1LA0JNW5 1464 aa15.56■□□□□ 0.08
HCG27-202ENST00000414008 SAMD9Q5K651 1589 aa15.56■□□□□ 0.08
HCG27-202ENST00000414008 G3V3G9 751 aa15.55■□□□□ 0.08
HCG27-202ENST00000414008 RYDENQ9NUL5 291 aaKnown RBP15.55■□□□□ 0.08
HCG27-202ENST00000414008 FBXO22Q8NEZ5 403 aa15.54■□□□□ 0.08
HCG27-202ENST00000414008 EFCAB5A4FU69 1503 aa15.53■□□□□ 0.08
HCG27-202ENST00000414008 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
HCG27-202ENST00000414008 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms