RNA–Protein interactions for RNA: ENST00000413945.5

LINC00472-201, long intergenic non-protein coding RNA 472, humanhuman

TSL 3

Gene LINC00472, Length 662 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-201ENST00000413945 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
LINC00472-201ENST00000413945 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
LINC00472-201ENST00000413945 KIAA0586Q9BVV6 1533 aa11.11□□□□□ -0.63
LINC00472-201ENST00000413945 LTBP4Q8N2S1 1624 aa11.11□□□□□ -0.63
LINC00472-201ENST00000413945 ABCA5Q8WWZ7 1642 aa11.11□□□□□ -0.63
LINC00472-201ENST00000413945 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
LINC00472-201ENST00000413945 PLB1Q6P1J6 1458 aa11.11□□□□□ -0.63
LINC00472-201ENST00000413945 ADAMTS12P58397 1594 aa11.11□□□□□ -0.63
LINC00472-201ENST00000413945 ASXL2Q76L83 1435 aa11.1□□□□□ -0.63
LINC00472-201ENST00000413945 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
LINC00472-201ENST00000413945 BCORL1Q5H9F3 1711 aa11.09□□□□□ -0.63
LINC00472-201ENST00000413945 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
LINC00472-201ENST00000413945 STRCQ7RTU9 1775 aa11.07□□□□□ -0.64
LINC00472-201ENST00000413945 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
LINC00472-201ENST00000413945 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
LINC00472-201ENST00000413945 YEATS2Q9ULM3 1422 aa11.05□□□□□ -0.64
LINC00472-201ENST00000413945 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
LINC00472-201ENST00000413945 ABCC2Q92887 1545 aa11.04□□□□□ -0.64
LINC00472-201ENST00000413945 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
LINC00472-201ENST00000413945 RIMS1Q86UR5 1692 aaKnown RBP11.01□□□□□ -0.65
LINC00472-201ENST00000413945 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
LINC00472-201ENST00000413945 POTEJP0CG39 1038 aa11□□□□□ -0.65
LINC00472-201ENST00000413945 PTPRTO14522 1441 aa10.99□□□□□ -0.65
LINC00472-201ENST00000413945 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
LINC00472-201ENST00000413945 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
LINC00472-201ENST00000413945 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
LINC00472-201ENST00000413945 CUX1P39880 1505 aa10.97□□□□□ -0.65
LINC00472-201ENST00000413945 MAGI3Q5TCQ9 1506 aa10.95□□□□□ -0.66
LINC00472-201ENST00000413945 CUL7Q14999 1698 aa10.95□□□□□ -0.66
LINC00472-201ENST00000413945 HSPA1LP34931 641 aa10.94□□□□□ -0.66
LINC00472-201ENST00000413945 CFAP43Q8NDM7 1665 aa10.94□□□□□ -0.66
LINC00472-201ENST00000413945 UBAP1LF5GYI3 381 aa10.92□□□□□ -0.66
LINC00472-201ENST00000413945 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
LINC00472-201ENST00000413945 RGS17Q9UGC6 210 aaPredicted RBP10.92□□□□□ -0.66
LINC00472-201ENST00000413945 ARAP3Q8WWN8 1544 aa10.91□□□□□ -0.66
LINC00472-201ENST00000413945 PREX1Q8TCU6 1659 aa10.91□□□□□ -0.66
LINC00472-201ENST00000413945 UHRF1BP1LA0JNW5 1464 aa10.9□□□□□ -0.66
LINC00472-201ENST00000413945 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
LINC00472-201ENST00000413945 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
LINC00472-201ENST00000413945 KDM5BQ9UGL1 1544 aa10.86□□□□□ -0.67
LINC00472-201ENST00000413945 PTPRGP23470 1445 aa10.85□□□□□ -0.67
LINC00472-201ENST00000413945 FAM163AQ96GL9 167 aaPredicted RBP10.85□□□□□ -0.67
LINC00472-201ENST00000413945 TTC37Q6PGP7 1564 aa10.85□□□□□ -0.67
LINC00472-201ENST00000413945 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
LINC00472-201ENST00000413945 CD109Q6YHK3 1445 aa10.83□□□□□ -0.68
LINC00472-201ENST00000413945 ERICH3Q5RHP9 1530 aa10.82□□□□□ -0.68
LINC00472-201ENST00000413945 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
LINC00472-201ENST00000413945 ASTLQ6HA08 431 aaPredicted RBP10.79□□□□□ -0.68
LINC00472-201ENST00000413945 ZCCHC11Q5TAX3 1644 aaKnown RBP10.79□□□□□ -0.68
LINC00472-201ENST00000413945 WDR7Q9Y4E6 1490 aa10.79□□□□□ -0.68
LINC00472-201ENST00000413945 ARID4BQ4LE39 1312 aaPredicted RBP10.79□□□□□ -0.68
LINC00472-201ENST00000413945 FRMPD1Q5SYB0 1578 aa10.77□□□□□ -0.69
LINC00472-201ENST00000413945 ARHGEF40Q8TER5 1519 aa10.76□□□□□ -0.69
LINC00472-201ENST00000413945 ATMINO43313 823 aaPredicted RBP10.76□□□□□ -0.69
LINC00472-201ENST00000413945 POTEAQ6S8J7 498 aa10.76□□□□□ -0.69
LINC00472-201ENST00000413945 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
LINC00472-201ENST00000413945 C7P10643 843 aa10.75□□□□□ -0.69
LINC00472-201ENST00000413945 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
LINC00472-201ENST00000413945 SLC39A7Q92504 469 aa10.74□□□□□ -0.69
LINC00472-201ENST00000413945 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00472-201ENST00000413945 SIGLEC1Q9BZZ2 1709 aa10.74□□□□□ -0.69
LINC00472-201ENST00000413945 FER1L4A9Z1Z3 1794 aa10.74□□□□□ -0.69
LINC00472-201ENST00000413945 TNIKQ9UKE5 1360 aa10.74□□□□□ -0.69
LINC00472-201ENST00000413945 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
LINC00472-201ENST00000413945 UHRF1BP1Q6BDS2 1440 aa10.73□□□□□ -0.69
LINC00472-201ENST00000413945 ZNF335Q9H4Z2 1342 aaPredicted RBP10.72□□□□□ -0.69
LINC00472-201ENST00000413945 PHLDB1Q86UU1 1377 aa10.71□□□□□ -0.69
LINC00472-201ENST00000413945 POGZQ7Z3K3 1410 aa10.7□□□□□ -0.7
LINC00472-201ENST00000413945 RAPGEF3O95398 923 aa10.7□□□□□ -0.7
LINC00472-201ENST00000413945 CDAN1Q8IWY9 1227 aa10.7□□□□□ -0.7
LINC00472-201ENST00000413945 ALKQ9UM73 1620 aa10.69□□□□□ -0.7
LINC00472-201ENST00000413945 SETD1BQ9UPS6 1966 aaKnown RBP10.69□□□□□ -0.7
LINC00472-201ENST00000413945 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
LINC00472-201ENST00000413945 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
LINC00472-201ENST00000413945 FANCAO15360 1455 aa10.68□□□□□ -0.7
LINC00472-201ENST00000413945 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
LINC00472-201ENST00000413945 PAK3O75914 559 aaPredicted RBP10.66□□□□□ -0.7
LINC00472-201ENST00000413945 ARHGEF12Q9NZN5 1544 aa10.66□□□□□ -0.7
LINC00472-201ENST00000413945 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
LINC00472-201ENST00000413945 TOM1O60784 492 aa10.65□□□□□ -0.7
LINC00472-201ENST00000413945 SCUBE2Q9NQ36 999 aa10.65□□□□□ -0.7
LINC00472-201ENST00000413945 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
LINC00472-201ENST00000413945 WRNQ14191 1432 aaPredicted RBP eCLIP10.62□□□□□ -0.71
LINC00472-201ENST00000413945 CARMIL2Q6F5E8 1435 aa10.62□□□□□ -0.71
LINC00472-201ENST00000413945 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
LINC00472-201ENST00000413945 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
LINC00472-201ENST00000413945 NEO1Q92859 1461 aa10.61□□□□□ -0.71
LINC00472-201ENST00000413945 ATN1P54259 1190 aaPredicted RBP10.6□□□□□ -0.71
LINC00472-201ENST00000413945 AKNAQ7Z591 1439 aa10.58□□□□□ -0.72
LINC00472-201ENST00000413945 RICTORQ6R327 1708 aa10.57□□□□□ -0.72
LINC00472-201ENST00000413945 CAMSAP1Q5T5Y3 1602 aa10.56□□□□□ -0.72
LINC00472-201ENST00000413945 ZMYM4Q5VZL5 1548 aa10.55□□□□□ -0.72
LINC00472-201ENST00000413945 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
LINC00472-201ENST00000413945 PTPRKQ15262 1439 aa10.55□□□□□ -0.72
LINC00472-201ENST00000413945 CPS1P31327 1500 aa10.54□□□□□ -0.72
LINC00472-201ENST00000413945 DISP1Q96F81 1524 aa10.54□□□□□ -0.72
LINC00472-201ENST00000413945 MMRN1Q13201 1228 aa10.54□□□□□ -0.72
LINC00472-201ENST00000413945 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
LINC00472-201ENST00000413945 ABCA9Q8IUA7 1624 aa10.54□□□□□ -0.72
LINC00472-201ENST00000413945 FHOD3Q2V2M9 1422 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms