RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CDK13Q14004 1512 aaKnown RBP19.91■□□□□ 0.78
SEMA3F-202ENST00000413852 SUPT6HQ7KZ85 1726 aaKnown RBP19.89■□□□□ 0.78
SEMA3F-202ENST00000413852 UGGT2Q9NYU1 1516 aa19.89■□□□□ 0.77
SEMA3F-202ENST00000413852 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
SEMA3F-202ENST00000413852 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
SEMA3F-202ENST00000413852 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
SEMA3F-202ENST00000413852 NOP58Q9Y2X3 529 aaKnown RBP19.85■□□□□ 0.77
SEMA3F-202ENST00000413852 CUL7Q14999 1698 aa19.85■□□□□ 0.77
SEMA3F-202ENST00000413852 EHBP1L1Q8N3D4 1523 aa19.84■□□□□ 0.77
SEMA3F-202ENST00000413852 SAMD9Q5K651 1589 aa19.84■□□□□ 0.77
SEMA3F-202ENST00000413852 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.76
SEMA3F-202ENST00000413852 ZNF777Q9ULD5 760 aaPredicted RBP19.82■□□□□ 0.76
SEMA3F-202ENST00000413852 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
SEMA3F-202ENST00000413852 ERICH6BQ5W0A0 696 aa19.81■□□□□ 0.76
SEMA3F-202ENST00000413852 HECW1Q76N89 1606 aa19.78■□□□□ 0.76
SEMA3F-202ENST00000413852 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
SEMA3F-202ENST00000413852 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
SEMA3F-202ENST00000413852 KDM2AQ9Y2K7 1162 aa19.77■□□□□ 0.76
SEMA3F-202ENST00000413852 SKAP1Q86WV1 359 aa19.77■□□□□ 0.75
SEMA3F-202ENST00000413852 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.75
SEMA3F-202ENST00000413852 NUDCQ9Y266 331 aa19.76■□□□□ 0.75
SEMA3F-202ENST00000413852 SPATA31E1Q6ZUB1 1445 aa19.76■□□□□ 0.75
SEMA3F-202ENST00000413852 TEX14Q8IWB6 1497 aa19.75■□□□□ 0.75
SEMA3F-202ENST00000413852 DHX29Q7Z478 1369 aaKnown RBP19.75■□□□□ 0.75
SEMA3F-202ENST00000413852 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
SEMA3F-202ENST00000413852 RPRD2Q5VT52 1461 aaKnown RBP19.74■□□□□ 0.75
SEMA3F-202ENST00000413852 GCC2Q8IWJ2 1684 aa19.74■□□□□ 0.75
SEMA3F-202ENST00000413852 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
SEMA3F-202ENST00000413852 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
SEMA3F-202ENST00000413852 ABCC5O15440 1437 aa19.72■□□□□ 0.75
SEMA3F-202ENST00000413852 DAPK1P53355 1430 aa19.71■□□□□ 0.75
SEMA3F-202ENST00000413852 USP47Q96K76 1375 aa19.71■□□□□ 0.75
SEMA3F-202ENST00000413852 PKD2Q13563 968 aa19.71■□□□□ 0.75
SEMA3F-202ENST00000413852 SMG6Q86US8 1419 aaKnown RBP19.7■□□□□ 0.74
SEMA3F-202ENST00000413852 EXOC6Q8TAG9 804 aa19.69■□□□□ 0.74
SEMA3F-202ENST00000413852 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
SEMA3F-202ENST00000413852 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
SEMA3F-202ENST00000413852 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
SEMA3F-202ENST00000413852 BCORL1Q5H9F3 1711 aa19.67■□□□□ 0.74
SEMA3F-202ENST00000413852 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
SEMA3F-202ENST00000413852 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
SEMA3F-202ENST00000413852 IPO9Q96P70 1041 aaKnown RBP19.66■□□□□ 0.74
SEMA3F-202ENST00000413852 ZBTB47Q9UFB7 747 aaPredicted RBP19.65■□□□□ 0.74
SEMA3F-202ENST00000413852 ST20-MTHFSA0A0A6YYL1 179 aa19.63■□□□□ 0.73
SEMA3F-202ENST00000413852 PLIN1O60240 522 aa19.63■□□□□ 0.73
SEMA3F-202ENST00000413852 CARD11Q9BXL7 1154 aa19.63■□□□□ 0.73
SEMA3F-202ENST00000413852 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
SEMA3F-202ENST00000413852 RTN4Q9NQC3 1192 aaKnown RBP19.63■□□□□ 0.73
SEMA3F-202ENST00000413852 CFDP1Q9UEE9 299 aaPredicted RBP19.62■□□□□ 0.73
SEMA3F-202ENST00000413852 CDCA7LQ96GN5 454 aa19.61■□□□□ 0.73
SEMA3F-202ENST00000413852 PZPP20742 1482 aa19.61■□□□□ 0.73
SEMA3F-202ENST00000413852 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
SEMA3F-202ENST00000413852 RNF123Q5XPI4 1314 aa19.6■□□□□ 0.73
SEMA3F-202ENST00000413852 WDR62O43379 1518 aa19.57■□□□□ 0.72
SEMA3F-202ENST00000413852 DCAF11Q8TEB1 546 aa19.57■□□□□ 0.72
SEMA3F-202ENST00000413852 IL27Q8NEV9 243 aa19.56■□□□□ 0.72
SEMA3F-202ENST00000413852 IQGAP2Q13576 1575 aa19.56■□□□□ 0.72
SEMA3F-202ENST00000413852 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
SEMA3F-202ENST00000413852 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
SEMA3F-202ENST00000413852 ROCK1Q13464 1354 aa19.54■□□□□ 0.72
SEMA3F-202ENST00000413852 RGL3Q3MIN7 710 aa19.53■□□□□ 0.72
SEMA3F-202ENST00000413852 CC2D1BQ5T0F9 858 aaKnown RBP19.52■□□□□ 0.72
SEMA3F-202ENST00000413852 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.72
SEMA3F-202ENST00000413852 FBLN2P98095 1184 aa19.51■□□□□ 0.71
SEMA3F-202ENST00000413852 NUP153P49790 1475 aaKnown RBP19.51■□□□□ 0.71
SEMA3F-202ENST00000413852 ANO8Q9HCE9 1232 aaPredicted RBP19.5■□□□□ 0.71
SEMA3F-202ENST00000413852 DNMT1P26358 1616 aaKnown RBP19.5■□□□□ 0.71
SEMA3F-202ENST00000413852 PDE4AP27815 886 aa19.5■□□□□ 0.71
SEMA3F-202ENST00000413852 KIAA1107Q9UPP5 1409 aa19.5■□□□□ 0.71
SEMA3F-202ENST00000413852 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
SEMA3F-202ENST00000413852 NUP155O75694 1391 aa19.5■□□□□ 0.71
SEMA3F-202ENST00000413852 SLC4A3P48751 1232 aa19.49■□□□□ 0.71
SEMA3F-202ENST00000413852 TARBP1Q13395 1621 aaKnown RBP19.48■□□□□ 0.71
SEMA3F-202ENST00000413852 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
SEMA3F-202ENST00000413852 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
SEMA3F-202ENST00000413852 MYT1LQ9UL68 1186 aa19.47■□□□□ 0.71
SEMA3F-202ENST00000413852 NBPF1Q3BBV0 1214 aa19.47■□□□□ 0.71
SEMA3F-202ENST00000413852 CAMSAP2Q08AD1 1489 aa19.47■□□□□ 0.71
SEMA3F-202ENST00000413852 NEFMP07197 916 aa19.46■□□□□ 0.71
SEMA3F-202ENST00000413852 MYBBP1AQ9BQG0 1328 aaKnown RBP19.45■□□□□ 0.7
SEMA3F-202ENST00000413852 KDM5CP41229 1560 aa19.45■□□□□ 0.7
SEMA3F-202ENST00000413852 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
SEMA3F-202ENST00000413852 PLB1Q6P1J6 1458 aa19.44■□□□□ 0.7
SEMA3F-202ENST00000413852 HNRNPMP52272 730 aaKnown RBP eCLIP19.44■□□□□ 0.7
SEMA3F-202ENST00000413852 C20orf194Q5TEA3 1177 aa19.44■□□□□ 0.7
SEMA3F-202ENST00000413852 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
SEMA3F-202ENST00000413852 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
SEMA3F-202ENST00000413852 CRBNQ96SW2 442 aa19.43■□□□□ 0.7
SEMA3F-202ENST00000413852 LRPPRCP42704 1394 aaKnown RBP19.41■□□□□ 0.7
SEMA3F-202ENST00000413852 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
SEMA3F-202ENST00000413852 ANKRD50Q9ULJ7 1429 aa19.41■□□□□ 0.7
SEMA3F-202ENST00000413852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.7
SEMA3F-202ENST00000413852 BACH2Q9BYV9 841 aa19.4■□□□□ 0.7
SEMA3F-202ENST00000413852 KIF14Q15058 1648 aa19.4■□□□□ 0.7
SEMA3F-202ENST00000413852 GPATCH8Q9UKJ3 1502 aaKnown RBP19.4■□□□□ 0.7
SEMA3F-202ENST00000413852 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.7
SEMA3F-202ENST00000413852 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
SEMA3F-202ENST00000413852 ANKRD30AQ9BXX3 1397 aa19.37■□□□□ 0.69
SEMA3F-202ENST00000413852 BRD4O60885 1362 aaPredicted RBP19.36■□□□□ 0.69
SEMA3F-202ENST00000413852 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms