RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
RFFL-203ENST00000413582 PREX1Q8TCU6 1659 aa16.16■□□□□ 0.18
RFFL-203ENST00000413582 PLCH2O75038 1416 aa16.15■□□□□ 0.18
RFFL-203ENST00000413582 SCAPERQ9BY12 1400 aa16.15■□□□□ 0.18
RFFL-203ENST00000413582 CERKQ8TCT0 537 aa16.14■□□□□ 0.17
RFFL-203ENST00000413582 MYO5CQ9NQX4 1742 aa16.14■□□□□ 0.17
RFFL-203ENST00000413582 C9orf84Q5VXU9 1444 aa16.13■□□□□ 0.17
RFFL-203ENST00000413582 MLECQ14165 292 aa16.13■□□□□ 0.17
RFFL-203ENST00000413582 ATP10AO60312 1499 aa16.12■□□□□ 0.17
RFFL-203ENST00000413582 KIF14Q15058 1648 aa16.09■□□□□ 0.17
RFFL-203ENST00000413582 STRCQ7RTU9 1775 aa16.09■□□□□ 0.17
RFFL-203ENST00000413582 KDM5CP41229 1560 aa16.09■□□□□ 0.17
RFFL-203ENST00000413582 ZNF518AQ6AHZ1 1483 aa16.07■□□□□ 0.16
RFFL-203ENST00000413582 DIP2CQ9Y2E4 1556 aa16.05■□□□□ 0.16
RFFL-203ENST00000413582 SETD1BQ9UPS6 1966 aaKnown RBP16.05■□□□□ 0.16
RFFL-203ENST00000413582 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
RFFL-203ENST00000413582 FMN1Q68DA7 1419 aa16.04■□□□□ 0.16
RFFL-203ENST00000413582 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
RFFL-203ENST00000413582 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
RFFL-203ENST00000413582 ARHGAP5Q13017 1502 aa16.03■□□□□ 0.16
RFFL-203ENST00000413582 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.16
RFFL-203ENST00000413582 ABCA6Q8N139 1617 aa16.02■□□□□ 0.16
RFFL-203ENST00000413582 ARHGAP35Q9NRY4 1499 aa16.02■□□□□ 0.15
RFFL-203ENST00000413582 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.15
RFFL-203ENST00000413582 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.15
RFFL-203ENST00000413582 C3P01024 1663 aa16.01■□□□□ 0.15
RFFL-203ENST00000413582 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
RFFL-203ENST00000413582 AFAP1Q8N556 730 aa15.98■□□□□ 0.15
RFFL-203ENST00000413582 AGLP35573 1532 aa15.98■□□□□ 0.15
RFFL-203ENST00000413582 PREX2Q70Z35 1606 aa15.97■□□□□ 0.15
RFFL-203ENST00000413582 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
RFFL-203ENST00000413582 CLIP1P30622 1438 aa15.97■□□□□ 0.15
RFFL-203ENST00000413582 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
RFFL-203ENST00000413582 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
RFFL-203ENST00000413582 ABCC1P33527 1531 aa15.97■□□□□ 0.15
RFFL-203ENST00000413582 DISP3Q9P2K9 1392 aa15.97■□□□□ 0.15
RFFL-203ENST00000413582 ITSN2Q9NZM3 1697 aa15.96■□□□□ 0.15
RFFL-203ENST00000413582 PTPRTO14522 1441 aa15.96■□□□□ 0.15
RFFL-203ENST00000413582 ATP1B4Q9UN42 357 aaPredicted RBP15.96■□□□□ 0.15
RFFL-203ENST00000413582 ILDR2Q71H61 639 aa15.95■□□□□ 0.14
RFFL-203ENST00000413582 SPATA31D1Q6ZQQ2 1576 aa15.95■□□□□ 0.14
RFFL-203ENST00000413582 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
RFFL-203ENST00000413582 TRAPPC8Q9Y2L5 1435 aa15.94■□□□□ 0.14
RFFL-203ENST00000413582 KIDINS220Q9ULH0 1771 aa15.93■□□□□ 0.14
RFFL-203ENST00000413582 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
RFFL-203ENST00000413582 NCOA1Q15788 1441 aa15.91■□□□□ 0.14
RFFL-203ENST00000413582 SOCS7O14512 581 aa15.9■□□□□ 0.14
RFFL-203ENST00000413582 MYT1LQ9UL68 1186 aa15.9■□□□□ 0.14
RFFL-203ENST00000413582 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
RFFL-203ENST00000413582 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
RFFL-203ENST00000413582 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
RFFL-203ENST00000413582 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
RFFL-203ENST00000413582 MROH2AA6NES4 1674 aa15.89■□□□□ 0.13
RFFL-203ENST00000413582 CCDC18Q5T9S5 1454 aa15.87■□□□□ 0.13
RFFL-203ENST00000413582 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
RFFL-203ENST00000413582 SAMD9LQ8IVG5 1584 aa15.86■□□□□ 0.13
RFFL-203ENST00000413582 NPATQ14207 1427 aa15.85■□□□□ 0.13
RFFL-203ENST00000413582 CAMSAP1Q5T5Y3 1602 aa15.85■□□□□ 0.13
RFFL-203ENST00000413582 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
RFFL-203ENST00000413582 ESF1Q9H501 851 aaKnown RBP15.84■□□□□ 0.13
RFFL-203ENST00000413582 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.13
RFFL-203ENST00000413582 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.12
RFFL-203ENST00000413582 PLXNC1O60486 1568 aa15.81■□□□□ 0.12
RFFL-203ENST00000413582 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
RFFL-203ENST00000413582 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
RFFL-203ENST00000413582 CLTCQ00610 1675 aaKnown RBP15.79■□□□□ 0.12
RFFL-203ENST00000413582 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
RFFL-203ENST00000413582 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
RFFL-203ENST00000413582 ATP7AQ04656 1500 aa15.78■□□□□ 0.12
RFFL-203ENST00000413582 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
RFFL-203ENST00000413582 ZMYM3Q14202 1370 aa15.77■□□□□ 0.12
RFFL-203ENST00000413582 CEP170BQ9Y4F5 1589 aaPredicted RBP15.77■□□□□ 0.11
RFFL-203ENST00000413582 GPATCH8Q9UKJ3 1502 aaKnown RBP15.77■□□□□ 0.11
RFFL-203ENST00000413582 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
RFFL-203ENST00000413582 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
RFFL-203ENST00000413582 ZNF335Q9H4Z2 1342 aaPredicted RBP15.75■□□□□ 0.11
RFFL-203ENST00000413582 A2MP01023 1474 aa15.74■□□□□ 0.11
RFFL-203ENST00000413582 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
RFFL-203ENST00000413582 NCKAP5LQ9HCH0 1330 aa15.73■□□□□ 0.11
RFFL-203ENST00000413582 ZNF777Q9ULD5 760 aaPredicted RBP15.73■□□□□ 0.11
RFFL-203ENST00000413582 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
RFFL-203ENST00000413582 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
RFFL-203ENST00000413582 ADGBQ8N7X0 1667 aa15.71■□□□□ 0.11
RFFL-203ENST00000413582 PKD2Q13563 968 aa15.71■□□□□ 0.11
RFFL-203ENST00000413582 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
RFFL-203ENST00000413582 UBAP1LF5GYI3 381 aa15.69■□□□□ 0.1
RFFL-203ENST00000413582 DNMT1P26358 1616 aaKnown RBP15.67■□□□□ 0.1
RFFL-203ENST00000413582 A2ML1A8K2U0 1454 aa15.66■□□□□ 0.1
RFFL-203ENST00000413582 POLR1AO95602 1720 aaPredicted RBP15.66■□□□□ 0.1
RFFL-203ENST00000413582 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
RFFL-203ENST00000413582 CCNB3Q8WWL7 1395 aa15.65■□□□□ 0.1
RFFL-203ENST00000413582 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
RFFL-203ENST00000413582 PPP6R1Q9UPN7 881 aa15.65■□□□□ 0.1
RFFL-203ENST00000413582 TIAM1Q13009 1591 aa15.65■□□□□ 0.1
RFFL-203ENST00000413582 GGT6Q6P531 493 aa15.64■□□□□ 0.09
RFFL-203ENST00000413582 MBD5Q9P267 1494 aa15.63■□□□□ 0.09
RFFL-203ENST00000413582 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
RFFL-203ENST00000413582 CPS1P31327 1500 aa15.61■□□□□ 0.09
RFFL-203ENST00000413582 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
RFFL-203ENST00000413582 EHBP1L1Q8N3D4 1523 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms