RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 WDR97A6NE52 1622 aa8.15□□□□□ -1.1
PRDM2-206ENST00000413440 HDGFP51858 240 aaKnown RBP8.15□□□□□ -1.1
PRDM2-206ENST00000413440 FOXD1Q16676 465 aa8.15□□□□□ -1.1
PRDM2-206ENST00000413440 KDM2AQ9Y2K7 1162 aa8.15□□□□□ -1.1
PRDM2-206ENST00000413440 ABCA5Q8WWZ7 1642 aa8.15□□□□□ -1.11
PRDM2-206ENST00000413440 NPM2Q86SE8 214 aaKnown RBP8.14□□□□□ -1.11
PRDM2-206ENST00000413440 AFAP1Q8N556 730 aa8.14□□□□□ -1.11
PRDM2-206ENST00000413440 RGL3Q3MIN7 710 aa8.14□□□□□ -1.11
PRDM2-206ENST00000413440 ZBTB47Q9UFB7 747 aaPredicted RBP8.13□□□□□ -1.11
PRDM2-206ENST00000413440 DAXXQ9UER7 740 aaPredicted RBP8.12□□□□□ -1.11
PRDM2-206ENST00000413440 CEBPAP49715 358 aaPredicted RBP8.12□□□□□ -1.11
PRDM2-206ENST00000413440 SCAPERQ9BY12 1400 aa8.11□□□□□ -1.11
PRDM2-206ENST00000413440 CTTNBP2Q8WZ74 1663 aa8.11□□□□□ -1.11
PRDM2-206ENST00000413440 WDR7Q9Y4E6 1490 aa8.11□□□□□ -1.11
PRDM2-206ENST00000413440 CDK13Q14004 1512 aaKnown RBP8.11□□□□□ -1.11
PRDM2-206ENST00000413440 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
PRDM2-206ENST00000413440 NUP160Q12769 1436 aa8.1□□□□□ -1.11
PRDM2-206ENST00000413440 HECW1Q76N89 1606 aa8.1□□□□□ -1.11
PRDM2-206ENST00000413440 ERCC6L2Q5T890 1561 aa8.1□□□□□ -1.11
PRDM2-206ENST00000413440 HSPA2P54652 639 aa8.09□□□□□ -1.11
PRDM2-206ENST00000413440 CCDC9Q9Y3X0 531 aaKnown RBP8.09□□□□□ -1.11
PRDM2-206ENST00000413440 KDM6BO15054 1643 aa8.09□□□□□ -1.11
PRDM2-206ENST00000413440 AKNAQ7Z591 1439 aa8.08□□□□□ -1.12
PRDM2-206ENST00000413440 ADGRL1O94910 1474 aa8.08□□□□□ -1.12
PRDM2-206ENST00000413440 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
PRDM2-206ENST00000413440 CDK11BP21127 795 aaKnown RBP8.07□□□□□ -1.12
PRDM2-206ENST00000413440 STK26Q9P289 416 aa8.07□□□□□ -1.12
PRDM2-206ENST00000413440 KIAA0556O60303 1618 aa8.07□□□□□ -1.12
PRDM2-206ENST00000413440 DENND4BO75064 1496 aaPredicted RBP8.07□□□□□ -1.12
PRDM2-206ENST00000413440 KANK4Q5T7N3 995 aaPredicted RBP8.07□□□□□ -1.12
PRDM2-206ENST00000413440 ZNF644Q9H582 1327 aaPredicted RBP8.06□□□□□ -1.12
PRDM2-206ENST00000413440 FANCAO15360 1455 aa8.06□□□□□ -1.12
PRDM2-206ENST00000413440 KIF14Q15058 1648 aa8.06□□□□□ -1.12
PRDM2-206ENST00000413440 POGKQ9P215 609 aa8.06□□□□□ -1.12
PRDM2-206ENST00000413440 RAPGEF6Q8TEU7 1601 aa8.06□□□□□ -1.12
PRDM2-206ENST00000413440 SAFB2Q14151 953 aaKnown RBP eCLIP8.05□□□□□ -1.12
PRDM2-206ENST00000413440 EFCAB5A4FU69 1503 aa8.04□□□□□ -1.12
PRDM2-206ENST00000413440 DMRT2Q9Y5R5 561 aa8.04□□□□□ -1.12
PRDM2-206ENST00000413440 ANKRD30AQ9BXX3 1397 aa8.04□□□□□ -1.12
PRDM2-206ENST00000413440 NEFLP07196 543 aa8.03□□□□□ -1.12
PRDM2-206ENST00000413440 RSPH4AQ5TD94 716 aa8.03□□□□□ -1.12
PRDM2-206ENST00000413440 KIF21BO75037 1637 aa8.02□□□□□ -1.12
PRDM2-206ENST00000413440 CLASP1Q7Z460 1538 aa8.02□□□□□ -1.13
PRDM2-206ENST00000413440 NUTM2FA1L443 756 aa8.01□□□□□ -1.13
PRDM2-206ENST00000413440 PRXQ9BXM0 1461 aa8.01□□□□□ -1.13
PRDM2-206ENST00000413440 NUTM2BA6NNL0 878 aaPredicted RBP8.01□□□□□ -1.13
PRDM2-206ENST00000413440 NUTM2EB1AL46 878 aaPredicted RBP8.01□□□□□ -1.13
PRDM2-206ENST00000413440 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
PRDM2-206ENST00000413440 NUTM2AQ8IVF1 878 aaPredicted RBP8.01□□□□□ -1.13
PRDM2-206ENST00000413440 UBAP1LF5GYI3 381 aa8.01□□□□□ -1.13
PRDM2-206ENST00000413440 ANKLE2Q86XL3 938 aa8.01□□□□□ -1.13
PRDM2-206ENST00000413440 ZCCHC11Q5TAX3 1644 aaKnown RBP8□□□□□ -1.13
PRDM2-206ENST00000413440 ATF3P18847 181 aa8□□□□□ -1.13
PRDM2-206ENST00000413440 DIEXFQ68CQ4 756 aaKnown RBP8□□□□□ -1.13
PRDM2-206ENST00000413440 TXNDC2Q86VQ3 553 aa8□□□□□ -1.13
PRDM2-206ENST00000413440 ATP10BO94823 1461 aa8□□□□□ -1.13
PRDM2-206ENST00000413440 EPRSP07814 1512 aaKnown RBP7.99□□□□□ -1.13
PRDM2-206ENST00000413440 ABCC10Q5T3U5 1492 aa7.99□□□□□ -1.13
PRDM2-206ENST00000413440 CASKIN1Q8WXD9 1431 aa7.99□□□□□ -1.13
PRDM2-206ENST00000413440 THEMISQ8N1K5 641 aaPredicted RBP7.99□□□□□ -1.13
PRDM2-206ENST00000413440 UGGT2Q9NYU1 1516 aa7.99□□□□□ -1.13
PRDM2-206ENST00000413440 PROSER2Q86WR7 435 aaPredicted RBP7.99□□□□□ -1.13
PRDM2-206ENST00000413440 TROQ12816 1431 aaPredicted RBP7.99□□□□□ -1.13
PRDM2-206ENST00000413440 NCKAP5LQ9HCH0 1330 aa7.99□□□□□ -1.13
PRDM2-206ENST00000413440 VPS8Q8N3P4 1428 aa7.98□□□□□ -1.13
PRDM2-206ENST00000413440 NUP155O75694 1391 aa7.98□□□□□ -1.13
PRDM2-206ENST00000413440 DISP1Q96F81 1524 aa7.97□□□□□ -1.13
PRDM2-206ENST00000413440 SOX12O15370 315 aa7.97□□□□□ -1.13
PRDM2-206ENST00000413440 PPP6R1Q9UPN7 881 aa7.97□□□□□ -1.13
PRDM2-206ENST00000413440 FYCO1Q9BQS8 1478 aa7.96□□□□□ -1.13
PRDM2-206ENST00000413440 PCF11O94913 1555 aaKnown RBP7.96□□□□□ -1.13
PRDM2-206ENST00000413440 TMC1Q8TDI8 760 aa7.96□□□□□ -1.14
PRDM2-206ENST00000413440 PLEKHH2Q8IVE3 1493 aa7.95□□□□□ -1.14
PRDM2-206ENST00000413440 NPHP1O15259 732 aa7.95□□□□□ -1.14
PRDM2-206ENST00000413440 ADCY10Q96PN6 1610 aa7.95□□□□□ -1.14
PRDM2-206ENST00000413440 PKD2Q13563 968 aa7.95□□□□□ -1.14
PRDM2-206ENST00000413440 FBXO31Q5XUX0 539 aaPredicted RBP7.94□□□□□ -1.14
PRDM2-206ENST00000413440 NCOA2Q15596 1464 aa7.94□□□□□ -1.14
PRDM2-206ENST00000413440 RBM33Q96EV2 1170 aaKnown RBP7.94□□□□□ -1.14
PRDM2-206ENST00000413440 UHRF1BP1Q6BDS2 1440 aa7.93□□□□□ -1.14
PRDM2-206ENST00000413440 EHBP1L1Q8N3D4 1523 aa7.93□□□□□ -1.14
PRDM2-206ENST00000413440 FKBP8Q14318 412 aa7.93□□□□□ -1.14
PRDM2-206ENST00000413440 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.93□□□□□ -1.14
PRDM2-206ENST00000413440 LMTK3Q96Q04 1460 aa7.93□□□□□ -1.14
PRDM2-206ENST00000413440 CFAP74Q9C0B2 1584 aa7.93□□□□□ -1.14
PRDM2-206ENST00000413440 PHLDB1Q86UU1 1377 aa7.92□□□□□ -1.14
PRDM2-206ENST00000413440 KIF15Q9NS87 1388 aa7.92□□□□□ -1.14
PRDM2-206ENST00000413440 ZFYVE16Q7Z3T8 1539 aa7.92□□□□□ -1.14
PRDM2-206ENST00000413440 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
PRDM2-206ENST00000413440 SLC26A8Q96RN1 970 aa7.91□□□□□ -1.14
PRDM2-206ENST00000413440 SRPK2P78362 688 aaKnown RBP7.91□□□□□ -1.14
PRDM2-206ENST00000413440 NUP153P49790 1475 aaKnown RBP7.91□□□□□ -1.14
PRDM2-206ENST00000413440 DCAF11Q8TEB1 546 aa7.91□□□□□ -1.14
PRDM2-206ENST00000413440 PLCH2O75038 1416 aa7.91□□□□□ -1.14
PRDM2-206ENST00000413440 TOM1O60784 492 aa7.91□□□□□ -1.14
PRDM2-206ENST00000413440 TONSLQ96HA7 1378 aa7.9□□□□□ -1.14
PRDM2-206ENST00000413440 C9orf84Q5VXU9 1444 aa7.9□□□□□ -1.14
PRDM2-206ENST00000413440 ZNF518AQ6AHZ1 1483 aa7.9□□□□□ -1.14
PRDM2-206ENST00000413440 MYOM3Q5VTT5 1437 aa7.9□□□□□ -1.15
PRDM2-206ENST00000413440 CSB-PGBD3P0DP91 1061 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms