RNA–Protein interactions for RNA: ENST00000413402.5

LINC00378-201, long intergenic non-protein coding RNA 378, humanhuman

TSL 5 BASIC

Gene LINC00378, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00378-201ENST00000413402 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
LINC00378-201ENST00000413402 ZFYVE16Q7Z3T8 1539 aa17.19■□□□□ 0.34
LINC00378-201ENST00000413402 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
LINC00378-201ENST00000413402 MYO5CQ9NQX4 1742 aa17.17■□□□□ 0.34
LINC00378-201ENST00000413402 KIF14Q15058 1648 aa17.17■□□□□ 0.34
LINC00378-201ENST00000413402 MAGI2Q86UL8 1455 aa17.16■□□□□ 0.34
LINC00378-201ENST00000413402 TROQ12816 1431 aaPredicted RBP17.15■□□□□ 0.34
LINC00378-201ENST00000413402 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
LINC00378-201ENST00000413402 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
LINC00378-201ENST00000413402 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
LINC00378-201ENST00000413402 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
LINC00378-201ENST00000413402 ATP10AO60312 1499 aa17.1■□□□□ 0.33
LINC00378-201ENST00000413402 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
LINC00378-201ENST00000413402 CCDC18Q5T9S5 1454 aa17.09■□□□□ 0.33
LINC00378-201ENST00000413402 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.32
LINC00378-201ENST00000413402 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
LINC00378-201ENST00000413402 ZNF518AQ6AHZ1 1483 aa17.07■□□□□ 0.32
LINC00378-201ENST00000413402 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
LINC00378-201ENST00000413402 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
LINC00378-201ENST00000413402 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
LINC00378-201ENST00000413402 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
LINC00378-201ENST00000413402 HSPA2P54652 639 aa17.05■□□□□ 0.32
LINC00378-201ENST00000413402 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
LINC00378-201ENST00000413402 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
LINC00378-201ENST00000413402 SIGLEC1Q9BZZ2 1709 aa17.02■□□□□ 0.32
LINC00378-201ENST00000413402 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
LINC00378-201ENST00000413402 CDC42BPBQ9Y5S2 1711 aa17.01■□□□□ 0.31
LINC00378-201ENST00000413402 CEBPAP49715 358 aaPredicted RBP17■□□□□ 0.31
LINC00378-201ENST00000413402 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
LINC00378-201ENST00000413402 KDM5CP41229 1560 aa16.97■□□□□ 0.31
LINC00378-201ENST00000413402 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.31
LINC00378-201ENST00000413402 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.3
LINC00378-201ENST00000413402 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
LINC00378-201ENST00000413402 MLH3Q9UHC1 1453 aa16.94■□□□□ 0.3
LINC00378-201ENST00000413402 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
LINC00378-201ENST00000413402 CDC42BPAQ5VT25 1732 aa16.94■□□□□ 0.3
LINC00378-201ENST00000413402 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC00378-201ENST00000413402 ABCC1P33527 1531 aa16.94■□□□□ 0.3
LINC00378-201ENST00000413402 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
LINC00378-201ENST00000413402 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
LINC00378-201ENST00000413402 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
LINC00378-201ENST00000413402 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
LINC00378-201ENST00000413402 ABCA6Q8N139 1617 aa16.91■□□□□ 0.3
LINC00378-201ENST00000413402 SOCS7O14512 581 aa16.9■□□□□ 0.3
LINC00378-201ENST00000413402 PREX1Q8TCU6 1659 aa16.9■□□□□ 0.3
LINC00378-201ENST00000413402 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
LINC00378-201ENST00000413402 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
LINC00378-201ENST00000413402 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
LINC00378-201ENST00000413402 REREQ9P2R6 1566 aa16.88■□□□□ 0.29
LINC00378-201ENST00000413402 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
LINC00378-201ENST00000413402 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
LINC00378-201ENST00000413402 SAMD9LQ8IVG5 1584 aa16.86■□□□□ 0.29
LINC00378-201ENST00000413402 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
LINC00378-201ENST00000413402 AGLP35573 1532 aa16.86■□□□□ 0.29
LINC00378-201ENST00000413402 CERKQ8TCT0 537 aa16.85■□□□□ 0.29
LINC00378-201ENST00000413402 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.28
LINC00378-201ENST00000413402 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.28
LINC00378-201ENST00000413402 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
LINC00378-201ENST00000413402 C3P01024 1663 aa16.82■□□□□ 0.28
LINC00378-201ENST00000413402 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
LINC00378-201ENST00000413402 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
LINC00378-201ENST00000413402 GGT6Q6P531 493 aa16.82■□□□□ 0.28
LINC00378-201ENST00000413402 ATP7AQ04656 1500 aa16.8■□□□□ 0.28
LINC00378-201ENST00000413402 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
LINC00378-201ENST00000413402 ZNF644Q9H582 1327 aaPredicted RBP16.79■□□□□ 0.28
LINC00378-201ENST00000413402 A2MP01023 1474 aa16.78■□□□□ 0.28
LINC00378-201ENST00000413402 ZMYM3Q14202 1370 aa16.77■□□□□ 0.28
LINC00378-201ENST00000413402 TIAM1Q13009 1591 aa16.75■□□□□ 0.27
LINC00378-201ENST00000413402 LOC105371045A0A1W2PR82 267 aa16.74■□□□□ 0.27
LINC00378-201ENST00000413402 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
LINC00378-201ENST00000413402 STRCQ7RTU9 1775 aa16.73■□□□□ 0.27
LINC00378-201ENST00000413402 CLTCQ00610 1675 aaKnown RBP16.72■□□□□ 0.27
LINC00378-201ENST00000413402 ILDR2Q71H61 639 aa16.72■□□□□ 0.27
LINC00378-201ENST00000413402 MROH2AA6NES4 1674 aa16.72■□□□□ 0.27
LINC00378-201ENST00000413402 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
LINC00378-201ENST00000413402 NPATQ14207 1427 aa16.71■□□□□ 0.27
LINC00378-201ENST00000413402 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
LINC00378-201ENST00000413402 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
LINC00378-201ENST00000413402 RSPH4AQ5TD94 716 aa16.71■□□□□ 0.27
LINC00378-201ENST00000413402 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
LINC00378-201ENST00000413402 DISP3Q9P2K9 1392 aa16.71■□□□□ 0.27
LINC00378-201ENST00000413402 NCOA2Q15596 1464 aa16.7■□□□□ 0.26
LINC00378-201ENST00000413402 KIF3BO15066 747 aa16.7■□□□□ 0.26
LINC00378-201ENST00000413402 PTPRTO14522 1441 aa16.7■□□□□ 0.26
LINC00378-201ENST00000413402 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
LINC00378-201ENST00000413402 MBD5Q9P267 1494 aa16.67■□□□□ 0.26
LINC00378-201ENST00000413402 DHX29Q7Z478 1369 aaKnown RBP16.67■□□□□ 0.26
LINC00378-201ENST00000413402 APLP2Q06481 763 aa16.67■□□□□ 0.26
LINC00378-201ENST00000413402 PLXNC1O60486 1568 aa16.67■□□□□ 0.26
LINC00378-201ENST00000413402 NCKAP5LQ9HCH0 1330 aa16.67■□□□□ 0.26
LINC00378-201ENST00000413402 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
LINC00378-201ENST00000413402 CAMSAP1Q5T5Y3 1602 aa16.67■□□□□ 0.26
LINC00378-201ENST00000413402 CAMSAP2Q08AD1 1489 aa16.66■□□□□ 0.26
LINC00378-201ENST00000413402 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
LINC00378-201ENST00000413402 WASHC2CQ9Y4E1 1318 aa16.65■□□□□ 0.26
LINC00378-201ENST00000413402 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
LINC00378-201ENST00000413402 PTPRKQ15262 1439 aa16.63■□□□□ 0.25
LINC00378-201ENST00000413402 PKD2Q13563 968 aa16.63■□□□□ 0.25
LINC00378-201ENST00000413402 MYO3AQ8NEV4 1616 aa16.61■□□□□ 0.25
LINC00378-201ENST00000413402 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms