RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
CUBNP1-201ENST00000412710 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
CUBNP1-201ENST00000412710 KIAA0556O60303 1618 aa12.53□□□□□ -0.4
CUBNP1-201ENST00000412710 HSPA5P11021 654 aaKnown RBP12.53□□□□□ -0.4
CUBNP1-201ENST00000412710 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
CUBNP1-201ENST00000412710 IFT140Q96RY7 1462 aa12.52□□□□□ -0.4
CUBNP1-201ENST00000412710 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.4
CUBNP1-201ENST00000412710 HIRIP3Q9BW71 556 aaPredicted RBP12.51□□□□□ -0.41
CUBNP1-201ENST00000412710 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
CUBNP1-201ENST00000412710 DISP1Q96F81 1524 aa12.5□□□□□ -0.41
CUBNP1-201ENST00000412710 ABCC5O15440 1437 aa12.5□□□□□ -0.41
CUBNP1-201ENST00000412710 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
CUBNP1-201ENST00000412710 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
CUBNP1-201ENST00000412710 RAPGEF6Q8TEU7 1601 aa12.49□□□□□ -0.41
CUBNP1-201ENST00000412710 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
CUBNP1-201ENST00000412710 RRP7BPQ9NSQ0 103 aa12.49□□□□□ -0.41
CUBNP1-201ENST00000412710 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
CUBNP1-201ENST00000412710 ADGRL2O95490 1459 aa12.49□□□□□ -0.41
CUBNP1-201ENST00000412710 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
CUBNP1-201ENST00000412710 NUP153P49790 1475 aaKnown RBP12.48□□□□□ -0.41
CUBNP1-201ENST00000412710 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
CUBNP1-201ENST00000412710 L3MBTL2Q969R5 705 aa12.46□□□□□ -0.41
CUBNP1-201ENST00000412710 RBM19Q9Y4C8 960 aaKnown RBP12.46□□□□□ -0.42
CUBNP1-201ENST00000412710 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
CUBNP1-201ENST00000412710 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
CUBNP1-201ENST00000412710 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
CUBNP1-201ENST00000412710 BCANQ96GW7 911 aa12.45□□□□□ -0.42
CUBNP1-201ENST00000412710 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
CUBNP1-201ENST00000412710 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
CUBNP1-201ENST00000412710 PZPP20742 1482 aa12.44□□□□□ -0.42
CUBNP1-201ENST00000412710 PRKRIP1Q9H875 184 aaPredicted RBP12.43□□□□□ -0.42
CUBNP1-201ENST00000412710 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
CUBNP1-201ENST00000412710 ZBED9Q6R2W3 1325 aa12.43□□□□□ -0.42
CUBNP1-201ENST00000412710 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
CUBNP1-201ENST00000412710 CHIC2Q9UKJ5 165 aa12.43□□□□□ -0.42
CUBNP1-201ENST00000412710 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
CUBNP1-201ENST00000412710 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
CUBNP1-201ENST00000412710 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
CUBNP1-201ENST00000412710 SHANK2Q9UPX8 1470 aa12.41□□□□□ -0.42
CUBNP1-201ENST00000412710 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
CUBNP1-201ENST00000412710 KIF14Q15058 1648 aa12.4□□□□□ -0.42
CUBNP1-201ENST00000412710 UHRF1BP1Q6BDS2 1440 aa12.4□□□□□ -0.42
CUBNP1-201ENST00000412710 KIAA1107Q9UPP5 1409 aa12.4□□□□□ -0.42
CUBNP1-201ENST00000412710 KDM5DQ9BY66 1539 aa12.4□□□□□ -0.43
CUBNP1-201ENST00000412710 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
CUBNP1-201ENST00000412710 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
CUBNP1-201ENST00000412710 GPATCH8Q9UKJ3 1502 aaKnown RBP12.39□□□□□ -0.43
CUBNP1-201ENST00000412710 NBPF8Q3BBV2 869 aa12.38□□□□□ -0.43
CUBNP1-201ENST00000412710 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
CUBNP1-201ENST00000412710 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
CUBNP1-201ENST00000412710 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
CUBNP1-201ENST00000412710 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
CUBNP1-201ENST00000412710 ROCK2O75116 1388 aaKnown RBP12.36□□□□□ -0.43
CUBNP1-201ENST00000412710 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
CUBNP1-201ENST00000412710 KDM5CP41229 1560 aa12.36□□□□□ -0.43
CUBNP1-201ENST00000412710 RALGAPBQ86X10 1494 aa12.35□□□□□ -0.43
CUBNP1-201ENST00000412710 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
CUBNP1-201ENST00000412710 ANKRD30AQ9BXX3 1397 aa12.35□□□□□ -0.43
CUBNP1-201ENST00000412710 SMG6Q86US8 1419 aaKnown RBP12.35□□□□□ -0.43
CUBNP1-201ENST00000412710 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
CUBNP1-201ENST00000412710 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
CUBNP1-201ENST00000412710 NUP160Q12769 1436 aa12.33□□□□□ -0.44
CUBNP1-201ENST00000412710 CARMIL2Q6F5E8 1435 aa12.33□□□□□ -0.44
CUBNP1-201ENST00000412710 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
CUBNP1-201ENST00000412710 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
CUBNP1-201ENST00000412710 ABCA8O94911 1581 aa12.32□□□□□ -0.44
CUBNP1-201ENST00000412710 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
CUBNP1-201ENST00000412710 PTPRGP23470 1445 aa12.32□□□□□ -0.44
CUBNP1-201ENST00000412710 PRG4Q92954 1404 aaPredicted RBP12.32□□□□□ -0.44
CUBNP1-201ENST00000412710 ABCC10Q5T3U5 1492 aa12.32□□□□□ -0.44
CUBNP1-201ENST00000412710 ARHGEF5Q12774 1597 aa12.32□□□□□ -0.44
CUBNP1-201ENST00000412710 BCORL1Q5H9F3 1711 aa12.31□□□□□ -0.44
CUBNP1-201ENST00000412710 CCDC184Q52MB2 194 aa12.31□□□□□ -0.44
CUBNP1-201ENST00000412710 CFDP1Q9UEE9 299 aaPredicted RBP12.31□□□□□ -0.44
CUBNP1-201ENST00000412710 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
CUBNP1-201ENST00000412710 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
CUBNP1-201ENST00000412710 USP47Q96K76 1375 aa12.3□□□□□ -0.44
CUBNP1-201ENST00000412710 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
CUBNP1-201ENST00000412710 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
CUBNP1-201ENST00000412710 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
CUBNP1-201ENST00000412710 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
CUBNP1-201ENST00000412710 E9PCH4 1651 aa12.26□□□□□ -0.45
CUBNP1-201ENST00000412710 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
CUBNP1-201ENST00000412710 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
CUBNP1-201ENST00000412710 INSRP06213 1382 aa12.25□□□□□ -0.45
CUBNP1-201ENST00000412710 MSH5O43196 834 aa12.25□□□□□ -0.45
CUBNP1-201ENST00000412710 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
CUBNP1-201ENST00000412710 LAMC1P11047 1609 aa12.24□□□□□ -0.45
CUBNP1-201ENST00000412710 PKD2Q13563 968 aa12.24□□□□□ -0.45
CUBNP1-201ENST00000412710 FAM9BQ8IZU0 186 aa12.24□□□□□ -0.45
CUBNP1-201ENST00000412710 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
CUBNP1-201ENST00000412710 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
CUBNP1-201ENST00000412710 KIF15Q9NS87 1388 aa12.24□□□□□ -0.45
CUBNP1-201ENST00000412710 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
CUBNP1-201ENST00000412710 MAST1Q9Y2H9 1570 aa12.23□□□□□ -0.45
CUBNP1-201ENST00000412710 ATP10BO94823 1461 aa12.23□□□□□ -0.45
CUBNP1-201ENST00000412710 RSPH4AQ5TD94 716 aa12.22□□□□□ -0.45
CUBNP1-201ENST00000412710 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
CUBNP1-201ENST00000412710 PLEKHD1A6NEE1 506 aa12.2□□□□□ -0.46
CUBNP1-201ENST00000412710 RALBP1Q15311 655 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms