RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
CLUHP3-202ENST00000411844 RAB3GAP2Q9H2M9 1393 aa17.32■□□□□ 0.36
CLUHP3-202ENST00000411844 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
CLUHP3-202ENST00000411844 ABCC5O15440 1437 aa17.3■□□□□ 0.36
CLUHP3-202ENST00000411844 TTC37Q6PGP7 1564 aa17.29■□□□□ 0.36
CLUHP3-202ENST00000411844 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
CLUHP3-202ENST00000411844 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
CLUHP3-202ENST00000411844 NAIPQ13075 1403 aa17.28■□□□□ 0.36
CLUHP3-202ENST00000411844 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
CLUHP3-202ENST00000411844 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
CLUHP3-202ENST00000411844 SHANK2Q9UPX8 1470 aa17.27■□□□□ 0.36
CLUHP3-202ENST00000411844 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.36
CLUHP3-202ENST00000411844 PLCH2O75038 1416 aa17.27■□□□□ 0.35
CLUHP3-202ENST00000411844 MYO5CQ9NQX4 1742 aa17.27■□□□□ 0.35
CLUHP3-202ENST00000411844 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
CLUHP3-202ENST00000411844 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
CLUHP3-202ENST00000411844 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
CLUHP3-202ENST00000411844 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
CLUHP3-202ENST00000411844 CDC42BPBQ9Y5S2 1711 aa17.25■□□□□ 0.35
CLUHP3-202ENST00000411844 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
CLUHP3-202ENST00000411844 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
CLUHP3-202ENST00000411844 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
CLUHP3-202ENST00000411844 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
CLUHP3-202ENST00000411844 CROCC2H7BZ55 1655 aa17.23■□□□□ 0.35
CLUHP3-202ENST00000411844 ARHGAP5Q13017 1502 aa17.23■□□□□ 0.35
CLUHP3-202ENST00000411844 ABCA9Q8IUA7 1624 aa17.23■□□□□ 0.35
CLUHP3-202ENST00000411844 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
CLUHP3-202ENST00000411844 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
CLUHP3-202ENST00000411844 KCNH8Q96L42 1107 aa17.21■□□□□ 0.35
CLUHP3-202ENST00000411844 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
CLUHP3-202ENST00000411844 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
CLUHP3-202ENST00000411844 EFCAB2Q5VUJ9 269 aa17.2■□□□□ 0.34
CLUHP3-202ENST00000411844 MAPKBP1O60336 1514 aa17.2■□□□□ 0.34
CLUHP3-202ENST00000411844 CCDC141Q6ZP82 1450 aa17.19■□□□□ 0.34
CLUHP3-202ENST00000411844 ANKRD30AQ9BXX3 1397 aa17.18■□□□□ 0.34
CLUHP3-202ENST00000411844 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
CLUHP3-202ENST00000411844 MAST1Q9Y2H9 1570 aa17.16■□□□□ 0.34
CLUHP3-202ENST00000411844 C9orf84Q5VXU9 1444 aa17.16■□□□□ 0.34
CLUHP3-202ENST00000411844 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
CLUHP3-202ENST00000411844 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
CLUHP3-202ENST00000411844 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
CLUHP3-202ENST00000411844 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
CLUHP3-202ENST00000411844 ABCC1P33527 1531 aa17.14■□□□□ 0.33
CLUHP3-202ENST00000411844 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
CLUHP3-202ENST00000411844 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLUHP3-202ENST00000411844 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
CLUHP3-202ENST00000411844 FANCAO15360 1455 aa17.1■□□□□ 0.33
CLUHP3-202ENST00000411844 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
CLUHP3-202ENST00000411844 PLXNC1O60486 1568 aa17.08■□□□□ 0.32
CLUHP3-202ENST00000411844 GLI2P10070 1586 aa17.08■□□□□ 0.32
CLUHP3-202ENST00000411844 ARHGEF12Q9NZN5 1544 aa17.07■□□□□ 0.32
CLUHP3-202ENST00000411844 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
CLUHP3-202ENST00000411844 CD109Q6YHK3 1445 aa17.06■□□□□ 0.32
CLUHP3-202ENST00000411844 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
CLUHP3-202ENST00000411844 KDM6BO15054 1643 aa17.06■□□□□ 0.32
CLUHP3-202ENST00000411844 KIF15Q9NS87 1388 aa17.05■□□□□ 0.32
CLUHP3-202ENST00000411844 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
CLUHP3-202ENST00000411844 NEO1Q92859 1461 aa17.03■□□□□ 0.32
CLUHP3-202ENST00000411844 ADGRL1O94910 1474 aa17.02■□□□□ 0.32
CLUHP3-202ENST00000411844 TRAPPC8Q9Y2L5 1435 aa17.01■□□□□ 0.31
CLUHP3-202ENST00000411844 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
CLUHP3-202ENST00000411844 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
CLUHP3-202ENST00000411844 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
CLUHP3-202ENST00000411844 SCAPERQ9BY12 1400 aa16.99■□□□□ 0.31
CLUHP3-202ENST00000411844 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
CLUHP3-202ENST00000411844 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
CLUHP3-202ENST00000411844 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
CLUHP3-202ENST00000411844 ZFYVE16Q7Z3T8 1539 aa16.97■□□□□ 0.31
CLUHP3-202ENST00000411844 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
CLUHP3-202ENST00000411844 ZNF518AQ6AHZ1 1483 aa16.97■□□□□ 0.31
CLUHP3-202ENST00000411844 INO80Q9ULG1 1556 aaPredicted RBP16.97■□□□□ 0.31
CLUHP3-202ENST00000411844 DIP2BQ9P265 1576 aa16.96■□□□□ 0.31
CLUHP3-202ENST00000411844 DENND4BO75064 1496 aaPredicted RBP16.95■□□□□ 0.3
CLUHP3-202ENST00000411844 PZPP20742 1482 aa16.95■□□□□ 0.3
CLUHP3-202ENST00000411844 ATP7AQ04656 1500 aa16.94■□□□□ 0.3
CLUHP3-202ENST00000411844 POGZQ7Z3K3 1410 aa16.94■□□□□ 0.3
CLUHP3-202ENST00000411844 UNC13BO14795 1591 aa16.93■□□□□ 0.3
CLUHP3-202ENST00000411844 KDM5CP41229 1560 aa16.93■□□□□ 0.3
CLUHP3-202ENST00000411844 AFAP1Q8N556 730 aa16.92■□□□□ 0.3
CLUHP3-202ENST00000411844 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
CLUHP3-202ENST00000411844 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
CLUHP3-202ENST00000411844 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
CLUHP3-202ENST00000411844 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
CLUHP3-202ENST00000411844 NUP155O75694 1391 aa16.89■□□□□ 0.3
CLUHP3-202ENST00000411844 ANKRD30BQ9BXX2 1392 aa16.88■□□□□ 0.29
CLUHP3-202ENST00000411844 FAM69CQ0P6D2 419 aa16.87■□□□□ 0.29
CLUHP3-202ENST00000411844 EIF2AK4Q9P2K8 1649 aaKnown RBP16.87■□□□□ 0.29
CLUHP3-202ENST00000411844 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
CLUHP3-202ENST00000411844 HECW2Q9P2P5 1572 aa16.85■□□□□ 0.29
CLUHP3-202ENST00000411844 IQGAP3Q86VI3 1631 aa16.85■□□□□ 0.29
CLUHP3-202ENST00000411844 DHX29Q7Z478 1369 aaKnown RBP16.85■□□□□ 0.29
CLUHP3-202ENST00000411844 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
CLUHP3-202ENST00000411844 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
CLUHP3-202ENST00000411844 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
CLUHP3-202ENST00000411844 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
CLUHP3-202ENST00000411844 RPRD2Q5VT52 1461 aaKnown RBP16.83■□□□□ 0.28
CLUHP3-202ENST00000411844 DEPDC5O75140 1603 aa16.82■□□□□ 0.28
CLUHP3-202ENST00000411844 PKD2Q13563 968 aa16.82■□□□□ 0.28
CLUHP3-202ENST00000411844 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
CLUHP3-202ENST00000411844 RICTORQ6R327 1708 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms