RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
RN7SKP259-201ENST00000411066 ERCC6L2Q5T890 1561 aa15.64■□□□□ 0.09
RN7SKP259-201ENST00000411066 UHRF1BP1LA0JNW5 1464 aa15.64■□□□□ 0.09
RN7SKP259-201ENST00000411066 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
RN7SKP259-201ENST00000411066 CROCC2H7BZ55 1655 aa15.61■□□□□ 0.09
RN7SKP259-201ENST00000411066 ADGBQ8N7X0 1667 aa15.61■□□□□ 0.09
RN7SKP259-201ENST00000411066 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
RN7SKP259-201ENST00000411066 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
RN7SKP259-201ENST00000411066 ADGRL2O95490 1459 aa15.6■□□□□ 0.09
RN7SKP259-201ENST00000411066 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
RN7SKP259-201ENST00000411066 SHANK2Q9UPX8 1470 aa15.58■□□□□ 0.08
RN7SKP259-201ENST00000411066 PREX2Q70Z35 1606 aa15.57■□□□□ 0.08
RN7SKP259-201ENST00000411066 ARHGEF5Q12774 1597 aa15.56■□□□□ 0.08
RN7SKP259-201ENST00000411066 KDM6BO15054 1643 aa15.56■□□□□ 0.08
RN7SKP259-201ENST00000411066 KDM5BQ9UGL1 1544 aa15.55■□□□□ 0.08
RN7SKP259-201ENST00000411066 SIN3AQ96ST3 1273 aa15.55■□□□□ 0.08
RN7SKP259-201ENST00000411066 NCOA1Q15788 1441 aa15.54■□□□□ 0.08
RN7SKP259-201ENST00000411066 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
RN7SKP259-201ENST00000411066 ANKRD30AQ9BXX3 1397 aa15.53■□□□□ 0.08
RN7SKP259-201ENST00000411066 CDC42BPBQ9Y5S2 1711 aa15.53■□□□□ 0.08
RN7SKP259-201ENST00000411066 NEUROD1Q13562 356 aa15.52■□□□□ 0.08
RN7SKP259-201ENST00000411066 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.08
RN7SKP259-201ENST00000411066 ZNF777Q9ULD5 760 aaPredicted RBP15.52■□□□□ 0.08
RN7SKP259-201ENST00000411066 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
RN7SKP259-201ENST00000411066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.51■□□□□ 0.07
RN7SKP259-201ENST00000411066 MYO5CQ9NQX4 1742 aa15.5■□□□□ 0.07
RN7SKP259-201ENST00000411066 DENND4BO75064 1496 aaPredicted RBP15.5■□□□□ 0.07
RN7SKP259-201ENST00000411066 SAMD9LQ8IVG5 1584 aa15.49■□□□□ 0.07
RN7SKP259-201ENST00000411066 PLEKHH2Q8IVE3 1493 aa15.49■□□□□ 0.07
RN7SKP259-201ENST00000411066 PPP1R15AO75807 674 aaPredicted RBP15.49■□□□□ 0.07
RN7SKP259-201ENST00000411066 MPHOSPH9Q99550 1183 aa15.49■□□□□ 0.07
RN7SKP259-201ENST00000411066 C9orf84Q5VXU9 1444 aa15.49■□□□□ 0.07
RN7SKP259-201ENST00000411066 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
RN7SKP259-201ENST00000411066 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
RN7SKP259-201ENST00000411066 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
RN7SKP259-201ENST00000411066 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
RN7SKP259-201ENST00000411066 TSPY4P0CV99 314 aa15.46■□□□□ 0.07
RN7SKP259-201ENST00000411066 TSPY10P0CW01 314 aa15.46■□□□□ 0.07
RN7SKP259-201ENST00000411066 MAST1Q9Y2H9 1570 aa15.45■□□□□ 0.06
RN7SKP259-201ENST00000411066 KIAA1107Q9UPP5 1409 aa15.45■□□□□ 0.06
RN7SKP259-201ENST00000411066 ARHGAP5Q13017 1502 aa15.45■□□□□ 0.06
RN7SKP259-201ENST00000411066 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
RN7SKP259-201ENST00000411066 PLCH2O75038 1416 aa15.43■□□□□ 0.06
RN7SKP259-201ENST00000411066 ANKRD50Q9ULJ7 1429 aa15.43■□□□□ 0.06
RN7SKP259-201ENST00000411066 ARAP3Q8WWN8 1544 aa15.43■□□□□ 0.06
RN7SKP259-201ENST00000411066 PZPP20742 1482 aa15.42■□□□□ 0.06
RN7SKP259-201ENST00000411066 ANKRD30BQ9BXX2 1392 aa15.41■□□□□ 0.06
RN7SKP259-201ENST00000411066 HNRNPMP52272 730 aaKnown RBP eCLIP15.41■□□□□ 0.06
RN7SKP259-201ENST00000411066 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
RN7SKP259-201ENST00000411066 SYCP2Q9BX26 1530 aa15.4■□□□□ 0.06
RN7SKP259-201ENST00000411066 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
RN7SKP259-201ENST00000411066 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
RN7SKP259-201ENST00000411066 KIF15Q9NS87 1388 aa15.38■□□□□ 0.05
RN7SKP259-201ENST00000411066 EFCAB2Q5VUJ9 269 aa15.38■□□□□ 0.05
RN7SKP259-201ENST00000411066 RPRD2Q5VT52 1461 aaKnown RBP15.38■□□□□ 0.05
RN7SKP259-201ENST00000411066 PLXNC1O60486 1568 aa15.37■□□□□ 0.05
RN7SKP259-201ENST00000411066 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
RN7SKP259-201ENST00000411066 ABCC1P33527 1531 aa15.35■□□□□ 0.05
RN7SKP259-201ENST00000411066 ABCA9Q8IUA7 1624 aa15.35■□□□□ 0.05
RN7SKP259-201ENST00000411066 MIER1Q8N108 512 aa15.32■□□□□ 0.04
RN7SKP259-201ENST00000411066 NUP155O75694 1391 aa15.31■□□□□ 0.04
RN7SKP259-201ENST00000411066 ARHGEF12Q9NZN5 1544 aa15.31■□□□□ 0.04
RN7SKP259-201ENST00000411066 UNC13BO14795 1591 aa15.3■□□□□ 0.04
RN7SKP259-201ENST00000411066 FOXD1Q16676 465 aa15.3■□□□□ 0.04
RN7SKP259-201ENST00000411066 DUOX2Q9NRD8 1548 aa15.3■□□□□ 0.04
RN7SKP259-201ENST00000411066 TEX14Q8IWB6 1497 aa15.29■□□□□ 0.04
RN7SKP259-201ENST00000411066 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
RN7SKP259-201ENST00000411066 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
RN7SKP259-201ENST00000411066 PKD2Q13563 968 aa15.29■□□□□ 0.04
RN7SKP259-201ENST00000411066 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
RN7SKP259-201ENST00000411066 ERBINQ96RT1 1412 aa15.27■□□□□ 0.04
RN7SKP259-201ENST00000411066 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.04
RN7SKP259-201ENST00000411066 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
RN7SKP259-201ENST00000411066 FANCAO15360 1455 aa15.25■□□□□ 0.03
RN7SKP259-201ENST00000411066 TRAPPC8Q9Y2L5 1435 aa15.25■□□□□ 0.03
RN7SKP259-201ENST00000411066 MAGI2Q86UL8 1455 aa15.24■□□□□ 0.03
RN7SKP259-201ENST00000411066 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
RN7SKP259-201ENST00000411066 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
RN7SKP259-201ENST00000411066 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.03
RN7SKP259-201ENST00000411066 CFAP74Q9C0B2 1584 aa15.21■□□□□ 0.03
RN7SKP259-201ENST00000411066 ZFYVE16Q7Z3T8 1539 aa15.21■□□□□ 0.03
RN7SKP259-201ENST00000411066 INO80Q9ULG1 1556 aaPredicted RBP15.19■□□□□ 0.02
RN7SKP259-201ENST00000411066 EIF4G2P78344 907 aaKnown RBP eCLIP15.18■□□□□ 0.02
RN7SKP259-201ENST00000411066 ADGRL1O94910 1474 aa15.18■□□□□ 0.02
RN7SKP259-201ENST00000411066 ATP7AQ04656 1500 aa15.17■□□□□ 0.02
RN7SKP259-201ENST00000411066 UHRF1BP1Q6BDS2 1440 aa15.17■□□□□ 0.02
RN7SKP259-201ENST00000411066 SCAPERQ9BY12 1400 aa15.17■□□□□ 0.02
RN7SKP259-201ENST00000411066 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
RN7SKP259-201ENST00000411066 ATP10AO60312 1499 aa15.15■□□□□ 0.02
RN7SKP259-201ENST00000411066 HSPA5P11021 654 aaKnown RBP15.15■□□□□ 0.02
RN7SKP259-201ENST00000411066 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
RN7SKP259-201ENST00000411066 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
RN7SKP259-201ENST00000411066 AFAP1Q8N556 730 aa15.14■□□□□ 0.01
RN7SKP259-201ENST00000411066 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
RN7SKP259-201ENST00000411066 EIF2AK4Q9P2K8 1649 aaKnown RBP15.14■□□□□ 0.01
RN7SKP259-201ENST00000411066 HIRIP3Q9BW71 556 aaPredicted RBP15.12■□□□□ 0.01
RN7SKP259-201ENST00000411066 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
RN7SKP259-201ENST00000411066 CCDC144AA2RUR9 1427 aa15.11■□□□□ 0.01
RN7SKP259-201ENST00000411066 SPATA31E1Q6ZUB1 1445 aa15.11■□□□□ 0.01
RN7SKP259-201ENST00000411066 PLA2R1Q13018 1463 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms