RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 RDXP35241 583 aaKnown RBP17.31■□□□□ 0.36
AFF3-202ENST00000409236 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
AFF3-202ENST00000409236 TPM2P07951 284 aa17.29■□□□□ 0.36
AFF3-202ENST00000409236 ARID3CA6NKF2 412 aa17.29■□□□□ 0.36
AFF3-202ENST00000409236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
AFF3-202ENST00000409236 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
AFF3-202ENST00000409236 CCDC66A2RUB6 948 aa17.27■□□□□ 0.36
AFF3-202ENST00000409236 TCERG1O14776 1098 aaKnown RBP17.27■□□□□ 0.35
AFF3-202ENST00000409236 P3H3Q8IVL6 736 aa17.27■□□□□ 0.35
AFF3-202ENST00000409236 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.35
AFF3-202ENST00000409236 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
AFF3-202ENST00000409236 SKOR2Q2VWA4 1001 aaPredicted RBP17.26■□□□□ 0.35
AFF3-202ENST00000409236 RUFY1Q96T51 708 aa17.26■□□□□ 0.35
AFF3-202ENST00000409236 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
AFF3-202ENST00000409236 ARGLU1Q9NWB6 273 aaPredicted RBP17.25■□□□□ 0.35
AFF3-202ENST00000409236 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
AFF3-202ENST00000409236 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
AFF3-202ENST00000409236 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
AFF3-202ENST00000409236 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
AFF3-202ENST00000409236 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
AFF3-202ENST00000409236 RASSF8Q8NHQ8 419 aa17.23■□□□□ 0.35
AFF3-202ENST00000409236 ATP6V1DQ9Y5K8 247 aa17.23■□□□□ 0.35
AFF3-202ENST00000409236 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
AFF3-202ENST00000409236 GOLGA6L19H0YKK7 550 aa17.23■□□□□ 0.35
AFF3-202ENST00000409236 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
AFF3-202ENST00000409236 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
AFF3-202ENST00000409236 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
AFF3-202ENST00000409236 IPO7O95373 1038 aaKnown RBP17.22■□□□□ 0.35
AFF3-202ENST00000409236 PDE4CQ08493 712 aa17.21■□□□□ 0.34
AFF3-202ENST00000409236 HSP90B2PQ58FF3 399 aa17.21■□□□□ 0.34
AFF3-202ENST00000409236 ST18O60284 1047 aa17.2■□□□□ 0.34
AFF3-202ENST00000409236 SLKQ9H2G2 1235 aaPredicted RBP17.2■□□□□ 0.34
AFF3-202ENST00000409236 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
AFF3-202ENST00000409236 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
AFF3-202ENST00000409236 TPD52L1Q16890 204 aaPredicted RBP17.19■□□□□ 0.34
AFF3-202ENST00000409236 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
AFF3-202ENST00000409236 H0YHG0 523 aa17.18■□□□□ 0.34
AFF3-202ENST00000409236 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
AFF3-202ENST00000409236 CHMP4AQ9BY43 222 aa17.16■□□□□ 0.34
AFF3-202ENST00000409236 NEXNQ0ZGT2 675 aa17.15■□□□□ 0.34
AFF3-202ENST00000409236 INCENPQ9NQS7 918 aa17.15■□□□□ 0.34
AFF3-202ENST00000409236 MYO6Q9UM54 1294 aa17.15■□□□□ 0.34
AFF3-202ENST00000409236 ANKRD20A12PQ8NF67 263 aa17.15■□□□□ 0.34
AFF3-202ENST00000409236 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.15■□□□□ 0.34
AFF3-202ENST00000409236 CREBRFQ8IUR6 639 aa17.14■□□□□ 0.33
AFF3-202ENST00000409236 ZRSR2Q15696 482 aaKnown RBP17.14■□□□□ 0.33
AFF3-202ENST00000409236 TAF3Q5VWG9 929 aa17.14■□□□□ 0.33
AFF3-202ENST00000409236 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
AFF3-202ENST00000409236 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
AFF3-202ENST00000409236 NEFHP12036 1026 aa17.13■□□□□ 0.33
AFF3-202ENST00000409236 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
AFF3-202ENST00000409236 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
AFF3-202ENST00000409236 PES1O00541 588 aaKnown RBP17.12■□□□□ 0.33
AFF3-202ENST00000409236 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
AFF3-202ENST00000409236 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
AFF3-202ENST00000409236 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
AFF3-202ENST00000409236 BECN2A8MW95 431 aa17.1■□□□□ 0.33
AFF3-202ENST00000409236 GSE1Q14687 1217 aa17.1■□□□□ 0.33
AFF3-202ENST00000409236 ERCC4Q92889 916 aaPredicted RBP17.09■□□□□ 0.33
AFF3-202ENST00000409236 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
AFF3-202ENST00000409236 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
AFF3-202ENST00000409236 GOLGA6L7A0A1B0GV03 622 aa17.08■□□□□ 0.32
AFF3-202ENST00000409236 DYDC1Q8WWB3 177 aa17.07■□□□□ 0.32
AFF3-202ENST00000409236 CARD11Q9BXL7 1154 aa17.07■□□□□ 0.32
AFF3-202ENST00000409236 SF3A1Q15459 793 aaKnown RBP17.07■□□□□ 0.32
AFF3-202ENST00000409236 ZNF592Q92610 1267 aa17.06■□□□□ 0.32
AFF3-202ENST00000409236 PODXL2Q9NZ53 605 aa17.06■□□□□ 0.32
AFF3-202ENST00000409236 CLIP1P30622 1438 aa17.06■□□□□ 0.32
AFF3-202ENST00000409236 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
AFF3-202ENST00000409236 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
AFF3-202ENST00000409236 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
AFF3-202ENST00000409236 LEKR1Q6ZMV7 388 aa17.05■□□□□ 0.32
AFF3-202ENST00000409236 H3BQV1 296 aa17.05■□□□□ 0.32
AFF3-202ENST00000409236 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
AFF3-202ENST00000409236 USP8P40818 1118 aa17.05■□□□□ 0.32
AFF3-202ENST00000409236 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
AFF3-202ENST00000409236 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
AFF3-202ENST00000409236 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
AFF3-202ENST00000409236 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
AFF3-202ENST00000409236 KTN1Q86UP2 1357 aaKnown RBP17.03■□□□□ 0.32
AFF3-202ENST00000409236 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
AFF3-202ENST00000409236 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
AFF3-202ENST00000409236 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.31
AFF3-202ENST00000409236 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
AFF3-202ENST00000409236 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
AFF3-202ENST00000409236 TRIM6-TRIM34B2RNG4 842 aa17■□□□□ 0.31
AFF3-202ENST00000409236 MNS1Q8NEH6 495 aa17■□□□□ 0.31
AFF3-202ENST00000409236 MEX3CQ5U5Q3 659 aaKnown RBP17■□□□□ 0.31
AFF3-202ENST00000409236 EEA1Q15075 1411 aa17■□□□□ 0.31
AFF3-202ENST00000409236 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
AFF3-202ENST00000409236 CCP110O43303 1012 aa16.98■□□□□ 0.31
AFF3-202ENST00000409236 KIAA0754O94854 1291 aa16.98■□□□□ 0.31
AFF3-202ENST00000409236 MARCH6O60337 910 aa16.97■□□□□ 0.31
AFF3-202ENST00000409236 TCEAL9Q9UHQ7 104 aa16.97■□□□□ 0.31
AFF3-202ENST00000409236 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
AFF3-202ENST00000409236 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
AFF3-202ENST00000409236 VPS53Q5VIR6 699 aa16.97■□□□□ 0.31
AFF3-202ENST00000409236 FBXO3Q9UK99 471 aa16.97■□□□□ 0.31
AFF3-202ENST00000409236 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
AFF3-202ENST00000409236 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms