RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 HSP90AA2PQ14568 343 aaPredicted RBP16.9■□□□□ 0.3
HERC3-203ENST00000407637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.3
HERC3-203ENST00000407637 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.29
HERC3-203ENST00000407637 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
HERC3-203ENST00000407637 NAP1L5Q96NT1 182 aaPredicted RBP16.88■□□□□ 0.29
HERC3-203ENST00000407637 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
HERC3-203ENST00000407637 RRP9O43818 475 aaKnown RBP16.85■□□□□ 0.29
HERC3-203ENST00000407637 NAIPQ13075 1403 aa16.84■□□□□ 0.29
HERC3-203ENST00000407637 FGD6Q6ZV73 1430 aa16.84■□□□□ 0.29
HERC3-203ENST00000407637 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.29
HERC3-203ENST00000407637 POGKQ9P215 609 aa16.83■□□□□ 0.28
HERC3-203ENST00000407637 DHX29Q7Z478 1369 aaKnown RBP16.83■□□□□ 0.28
HERC3-203ENST00000407637 RCAN3Q9UKA8 241 aa16.83■□□□□ 0.28
HERC3-203ENST00000407637 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
HERC3-203ENST00000407637 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
HERC3-203ENST00000407637 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
HERC3-203ENST00000407637 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
HERC3-203ENST00000407637 CUX1P39880 1505 aa16.8■□□□□ 0.28
HERC3-203ENST00000407637 DENND4BO75064 1496 aaPredicted RBP16.79■□□□□ 0.28
HERC3-203ENST00000407637 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
HERC3-203ENST00000407637 HECW1Q76N89 1606 aa16.78■□□□□ 0.28
HERC3-203ENST00000407637 POLR3GLQ9BT43 218 aa16.76■□□□□ 0.27
HERC3-203ENST00000407637 SPATA31E1Q6ZUB1 1445 aa16.75■□□□□ 0.27
HERC3-203ENST00000407637 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
HERC3-203ENST00000407637 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
HERC3-203ENST00000407637 ARXQ96QS3 562 aa16.75■□□□□ 0.27
HERC3-203ENST00000407637 PLIN1O60240 522 aa16.74■□□□□ 0.27
HERC3-203ENST00000407637 L1TD1Q5T7N2 865 aaKnown RBP16.74■□□□□ 0.27
HERC3-203ENST00000407637 CRBNQ96SW2 442 aa16.73■□□□□ 0.27
HERC3-203ENST00000407637 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
HERC3-203ENST00000407637 CLCN1P35523 988 aa16.72■□□□□ 0.27
HERC3-203ENST00000407637 C8orf34Q49A92 452 aa16.72■□□□□ 0.27
HERC3-203ENST00000407637 LRPPRCP42704 1394 aaKnown RBP16.71■□□□□ 0.26
HERC3-203ENST00000407637 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
HERC3-203ENST00000407637 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
HERC3-203ENST00000407637 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
HERC3-203ENST00000407637 BCORL1Q5H9F3 1711 aa16.69■□□□□ 0.26
HERC3-203ENST00000407637 FOXD1Q16676 465 aa16.69■□□□□ 0.26
HERC3-203ENST00000407637 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
HERC3-203ENST00000407637 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
HERC3-203ENST00000407637 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
HERC3-203ENST00000407637 KDM6BO15054 1643 aa16.67■□□□□ 0.26
HERC3-203ENST00000407637 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
HERC3-203ENST00000407637 TEX14Q8IWB6 1497 aa16.66■□□□□ 0.26
HERC3-203ENST00000407637 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
HERC3-203ENST00000407637 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
HERC3-203ENST00000407637 XRCC6P12956 609 aaKnown RBP eCLIP16.65■□□□□ 0.26
HERC3-203ENST00000407637 PANK2Q9BZ23 570 aa16.65■□□□□ 0.26
HERC3-203ENST00000407637 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
HERC3-203ENST00000407637 IGF1RP08069 1367 aa16.65■□□□□ 0.26
HERC3-203ENST00000407637 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
HERC3-203ENST00000407637 CASKIN1Q8WXD9 1431 aa16.64■□□□□ 0.26
HERC3-203ENST00000407637 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
HERC3-203ENST00000407637 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
HERC3-203ENST00000407637 MTUS2Q5JR59 1369 aa16.62■□□□□ 0.25
HERC3-203ENST00000407637 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
HERC3-203ENST00000407637 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
HERC3-203ENST00000407637 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
HERC3-203ENST00000407637 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
HERC3-203ENST00000407637 RBM10P98175 930 aaKnown RBP16.61■□□□□ 0.25
HERC3-203ENST00000407637 C20orf194Q5TEA3 1177 aa16.61■□□□□ 0.25
HERC3-203ENST00000407637 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
HERC3-203ENST00000407637 RPRD2Q5VT52 1461 aaKnown RBP16.61■□□□□ 0.25
HERC3-203ENST00000407637 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
HERC3-203ENST00000407637 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
HERC3-203ENST00000407637 RGS3P49796 1198 aa16.6■□□□□ 0.25
HERC3-203ENST00000407637 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
HERC3-203ENST00000407637 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
HERC3-203ENST00000407637 PDE3BQ13370 1112 aa16.59■□□□□ 0.25
HERC3-203ENST00000407637 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
HERC3-203ENST00000407637 USP47Q96K76 1375 aa16.57■□□□□ 0.24
HERC3-203ENST00000407637 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
HERC3-203ENST00000407637 KIF15Q9NS87 1388 aa16.56■□□□□ 0.24
HERC3-203ENST00000407637 GZF1Q9H116 711 aaPredicted RBP16.55■□□□□ 0.24
HERC3-203ENST00000407637 LRRIQ1Q96JM4 1722 aa16.55■□□□□ 0.24
HERC3-203ENST00000407637 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
HERC3-203ENST00000407637 ANKRD30BQ9BXX2 1392 aa16.54■□□□□ 0.24
HERC3-203ENST00000407637 USP19O94966 1318 aa16.54■□□□□ 0.24
HERC3-203ENST00000407637 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
HERC3-203ENST00000407637 PRDM4Q9UKN5 801 aa16.54■□□□□ 0.24
HERC3-203ENST00000407637 AAMPQ13685 434 aa16.53■□□□□ 0.24
HERC3-203ENST00000407637 PDCL3Q9H2J4 239 aa16.53■□□□□ 0.24
HERC3-203ENST00000407637 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
HERC3-203ENST00000407637 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
HERC3-203ENST00000407637 SUPT6HQ7KZ85 1726 aaKnown RBP16.53■□□□□ 0.24
HERC3-203ENST00000407637 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
HERC3-203ENST00000407637 KDM5CP41229 1560 aa16.52■□□□□ 0.23
HERC3-203ENST00000407637 ESPNB1AK53 854 aa16.51■□□□□ 0.23
HERC3-203ENST00000407637 CFTRP13569 1480 aa16.51■□□□□ 0.23
HERC3-203ENST00000407637 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
HERC3-203ENST00000407637 TPM2P07951 284 aa16.5■□□□□ 0.23
HERC3-203ENST00000407637 BECN1Q14457 450 aa16.5■□□□□ 0.23
HERC3-203ENST00000407637 ZNF326Q5BKZ1 582 aaKnown RBP16.5■□□□□ 0.23
HERC3-203ENST00000407637 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
HERC3-203ENST00000407637 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
HERC3-203ENST00000407637 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
HERC3-203ENST00000407637 RALBP1Q15311 655 aa16.48■□□□□ 0.23
HERC3-203ENST00000407637 SEC24BO95487 1268 aa16.47■□□□□ 0.23
HERC3-203ENST00000407637 KIF14Q15058 1648 aa16.46■□□□□ 0.22
HERC3-203ENST00000407637 MRE11P49959 708 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms