RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
MATN3-201ENST00000407540 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
MATN3-201ENST00000407540 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
MATN3-201ENST00000407540 C11orf95C9JLR9 678 aaPredicted RBP24.08■■□□□ 1.45
MATN3-201ENST00000407540 AKNAQ7Z591 1439 aa24.08■■□□□ 1.45
MATN3-201ENST00000407540 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.44
MATN3-201ENST00000407540 EIF4G3O43432 1585 aaKnown RBP24.07■■□□□ 1.44
MATN3-201ENST00000407540 NBPF8Q3BBV2 869 aa24.06■■□□□ 1.44
MATN3-201ENST00000407540 TSHZ2Q9NRE2 1034 aa24.06■■□□□ 1.44
MATN3-201ENST00000407540 PLB1Q6P1J6 1458 aa24.05■■□□□ 1.44
MATN3-201ENST00000407540 EIF4G2P78344 907 aaKnown RBP eCLIP24.05■■□□□ 1.44
MATN3-201ENST00000407540 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
MATN3-201ENST00000407540 RAPGEF6Q8TEU7 1601 aa24.03■■□□□ 1.44
MATN3-201ENST00000407540 ERCC6Q03468 1493 aa24.02■■□□□ 1.44
MATN3-201ENST00000407540 CDK11AQ9UQ88 783 aaPredicted RBP24.02■■□□□ 1.44
MATN3-201ENST00000407540 ANKRD30BQ9BXX2 1392 aa24.02■■□□□ 1.44
MATN3-201ENST00000407540 CFDP1Q9UEE9 299 aaPredicted RBP24.01■■□□□ 1.43
MATN3-201ENST00000407540 CCDC184Q52MB2 194 aa24.01■■□□□ 1.43
MATN3-201ENST00000407540 ROCK1Q13464 1354 aa23.98■■□□□ 1.43
MATN3-201ENST00000407540 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
MATN3-201ENST00000407540 DNMT1P26358 1616 aaKnown RBP23.97■■□□□ 1.43
MATN3-201ENST00000407540 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
MATN3-201ENST00000407540 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
MATN3-201ENST00000407540 ANP32EQ9BTT0 268 aa23.94■■□□□ 1.42
MATN3-201ENST00000407540 TROQ12816 1431 aaPredicted RBP23.94■■□□□ 1.42
MATN3-201ENST00000407540 RPRD2Q5VT52 1461 aaKnown RBP23.92■■□□□ 1.42
MATN3-201ENST00000407540 CAMSAP2Q08AD1 1489 aa23.91■■□□□ 1.42
MATN3-201ENST00000407540 KIF14Q15058 1648 aa23.91■■□□□ 1.42
MATN3-201ENST00000407540 NEFLP07196 543 aa23.91■■□□□ 1.42
MATN3-201ENST00000407540 GPATCH8Q9UKJ3 1502 aaKnown RBP23.9■■□□□ 1.42
MATN3-201ENST00000407540 TEX14Q8IWB6 1497 aa23.89■■□□□ 1.42
MATN3-201ENST00000407540 CNGB1Q14028 1251 aaPredicted RBP23.89■■□□□ 1.41
MATN3-201ENST00000407540 ZNF326Q5BKZ1 582 aaKnown RBP23.89■■□□□ 1.41
MATN3-201ENST00000407540 SYNJ2O15056 1496 aa23.88■■□□□ 1.41
MATN3-201ENST00000407540 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
MATN3-201ENST00000407540 NCOA1Q15788 1441 aa23.88■■□□□ 1.41
MATN3-201ENST00000407540 CCDC7Q96M83 1385 aa23.87■■□□□ 1.41
MATN3-201ENST00000407540 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
MATN3-201ENST00000407540 PZPP20742 1482 aa23.87■■□□□ 1.41
MATN3-201ENST00000407540 CNTLNQ9NXG0 1405 aa23.85■■□□□ 1.41
MATN3-201ENST00000407540 PKD2Q13563 968 aa23.84■■□□□ 1.41
MATN3-201ENST00000407540 FAM9BQ8IZU0 186 aa23.82■■□□□ 1.4
MATN3-201ENST00000407540 KIF7Q2M1P5 1343 aa23.82■■□□□ 1.4
MATN3-201ENST00000407540 PRKRIP1Q9H875 184 aaPredicted RBP23.82■■□□□ 1.4
MATN3-201ENST00000407540 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
MATN3-201ENST00000407540 CARMIL2Q6F5E8 1435 aa23.8■■□□□ 1.4
MATN3-201ENST00000407540 PLEKHD1A6NEE1 506 aa23.79■■□□□ 1.4
MATN3-201ENST00000407540 SPATA31E1Q6ZUB1 1445 aa23.78■■□□□ 1.4
MATN3-201ENST00000407540 NUP160Q12769 1436 aa23.77■■□□□ 1.4
MATN3-201ENST00000407540 MRS2Q9HD23 443 aa23.76■■□□□ 1.39
MATN3-201ENST00000407540 HNRNPMP52272 730 aaKnown RBP eCLIP23.74■■□□□ 1.39
MATN3-201ENST00000407540 ATP10BO94823 1461 aa23.74■■□□□ 1.39
MATN3-201ENST00000407540 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
MATN3-201ENST00000407540 ANKRD50Q9ULJ7 1429 aa23.73■■□□□ 1.39
MATN3-201ENST00000407540 KIAA1107Q9UPP5 1409 aa23.73■■□□□ 1.39
MATN3-201ENST00000407540 ITSN2Q9NZM3 1697 aa23.72■■□□□ 1.39
MATN3-201ENST00000407540 NUP155O75694 1391 aa23.71■■□□□ 1.39
MATN3-201ENST00000407540 SENP3-EIF4A1A0A087X0R7 540 aa23.7■■□□□ 1.38
MATN3-201ENST00000407540 ADGRL2O95490 1459 aa23.69■■□□□ 1.38
MATN3-201ENST00000407540 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
MATN3-201ENST00000407540 KDM2AQ9Y2K7 1162 aa23.68■■□□□ 1.38
MATN3-201ENST00000407540 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
MATN3-201ENST00000407540 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
MATN3-201ENST00000407540 PRKCSHP14314 528 aaPredicted RBP23.66■■□□□ 1.38
MATN3-201ENST00000407540 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
MATN3-201ENST00000407540 USP47Q96K76 1375 aa23.66■■□□□ 1.38
MATN3-201ENST00000407540 ABCA8O94911 1581 aa23.66■■□□□ 1.38
MATN3-201ENST00000407540 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
MATN3-201ENST00000407540 CROCC2H7BZ55 1655 aa23.65■■□□□ 1.38
MATN3-201ENST00000407540 MBD5Q9P267 1494 aa23.64■■□□□ 1.38
MATN3-201ENST00000407540 TSPY4P0CV99 314 aa23.64■■□□□ 1.38
MATN3-201ENST00000407540 TSPY10P0CW01 314 aa23.64■■□□□ 1.38
MATN3-201ENST00000407540 RBM19Q9Y4C8 960 aaKnown RBP23.61■■□□□ 1.37
MATN3-201ENST00000407540 BCORL1Q5H9F3 1711 aa23.6■■□□□ 1.37
MATN3-201ENST00000407540 KIF15Q9NS87 1388 aa23.58■■□□□ 1.37
MATN3-201ENST00000407540 PTPRGP23470 1445 aa23.58■■□□□ 1.37
MATN3-201ENST00000407540 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.36
MATN3-201ENST00000407540 CARD11Q9BXL7 1154 aa23.57■■□□□ 1.36
MATN3-201ENST00000407540 DCAF11Q8TEB1 546 aa23.56■■□□□ 1.36
MATN3-201ENST00000407540 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
MATN3-201ENST00000407540 ST20-MTHFSA0A0A6YYL1 179 aa23.52■■□□□ 1.35
MATN3-201ENST00000407540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.35
MATN3-201ENST00000407540 SHANK2Q9UPX8 1470 aa23.5■■□□□ 1.35
MATN3-201ENST00000407540 KDM5CP41229 1560 aa23.49■■□□□ 1.35
MATN3-201ENST00000407540 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
MATN3-201ENST00000407540 POLR1AO95602 1720 aaPredicted RBP23.48■■□□□ 1.35
MATN3-201ENST00000407540 SAMD9LQ8IVG5 1584 aa23.46■■□□□ 1.35
MATN3-201ENST00000407540 UHRF1BP1Q6BDS2 1440 aa23.45■■□□□ 1.34
MATN3-201ENST00000407540 B4GALNT3Q6L9W6 998 aa23.44■■□□□ 1.34
MATN3-201ENST00000407540 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
MATN3-201ENST00000407540 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
MATN3-201ENST00000407540 CCDC141Q6ZP82 1450 aa23.41■■□□□ 1.34
MATN3-201ENST00000407540 NBPF1Q3BBV0 1214 aa23.4■■□□□ 1.34
MATN3-201ENST00000407540 ERCC6L2Q5T890 1561 aa23.39■■□□□ 1.34
MATN3-201ENST00000407540 PPP4R2Q9NY27 417 aa23.39■■□□□ 1.33
MATN3-201ENST00000407540 SYCP2Q9BX26 1530 aa23.39■■□□□ 1.33
MATN3-201ENST00000407540 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.33
MATN3-201ENST00000407540 ROCK2O75116 1388 aaKnown RBP23.39■■□□□ 1.33
MATN3-201ENST00000407540 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
MATN3-201ENST00000407540 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms