RNA–Protein interactions for RNA: ENST00000405666.5

ESRRA-202, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-202ENST00000405666 CLASP1Q7Z460 1538 aa29.82■■■□□ 2.36
ESRRA-202ENST00000405666 ERCC6L2Q5T890 1561 aa29.82■■■□□ 2.36
ESRRA-202ENST00000405666 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
ESRRA-202ENST00000405666 ROCK1Q13464 1354 aa29.8■■■□□ 2.36
ESRRA-202ENST00000405666 CAMSAP2Q08AD1 1489 aa29.79■■■□□ 2.36
ESRRA-202ENST00000405666 ABCC10Q5T3U5 1492 aa29.79■■■□□ 2.36
ESRRA-202ENST00000405666 KDM6BO15054 1643 aa29.77■■■□□ 2.36
ESRRA-202ENST00000405666 NEUROD1Q13562 356 aa29.75■■■□□ 2.35
ESRRA-202ENST00000405666 TIMELESSQ9UNS1 1208 aa29.75■■■□□ 2.35
ESRRA-202ENST00000405666 CDC42BPAQ5VT25 1732 aa29.72■■■□□ 2.35
ESRRA-202ENST00000405666 ABCC2Q92887 1545 aa29.67■■■□□ 2.34
ESRRA-202ENST00000405666 DENND4BO75064 1496 aaPredicted RBP29.66■■■□□ 2.34
ESRRA-202ENST00000405666 ZNF777Q9ULD5 760 aaPredicted RBP29.66■■■□□ 2.34
ESRRA-202ENST00000405666 CROCC2H7BZ55 1655 aa29.61■■■□□ 2.33
ESRRA-202ENST00000405666 TRIM52Q96A61 297 aa29.6■■■□□ 2.33
ESRRA-202ENST00000405666 NCOA1Q15788 1441 aa29.6■■■□□ 2.33
ESRRA-202ENST00000405666 ADGRL2O95490 1459 aa29.6■■■□□ 2.33
ESRRA-202ENST00000405666 ACIN1Q9UKV3 1341 aaKnown RBP29.59■■■□□ 2.33
ESRRA-202ENST00000405666 ADGBQ8N7X0 1667 aa29.58■■■□□ 2.33
ESRRA-202ENST00000405666 PPP1R15AO75807 674 aaPredicted RBP29.57■■■□□ 2.32
ESRRA-202ENST00000405666 MPHOSPH9Q99550 1183 aa29.55■■■□□ 2.32
ESRRA-202ENST00000405666 UHRF1BP1LA0JNW5 1464 aa29.55■■■□□ 2.32
ESRRA-202ENST00000405666 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
ESRRA-202ENST00000405666 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
ESRRA-202ENST00000405666 SHANK2Q9UPX8 1470 aa29.51■■■□□ 2.32
ESRRA-202ENST00000405666 CDC42BPBQ9Y5S2 1711 aa29.51■■■□□ 2.31
ESRRA-202ENST00000405666 ANKRD30AQ9BXX3 1397 aa29.49■■■□□ 2.31
ESRRA-202ENST00000405666 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.48■■■□□ 2.316e-7■■■■□ 21.3
ESRRA-202ENST00000405666 KDM5BQ9UGL1 1544 aa29.48■■■□□ 2.31
ESRRA-202ENST00000405666 TTC37Q6PGP7 1564 aa29.48■■■□□ 2.31
ESRRA-202ENST00000405666 MBD5Q9P267 1494 aa29.47■■■□□ 2.31
ESRRA-202ENST00000405666 ARHGEF5Q12774 1597 aa29.46■■■□□ 2.31
ESRRA-202ENST00000405666 SAMD9LQ8IVG5 1584 aa29.46■■■□□ 2.31
ESRRA-202ENST00000405666 MIER1Q8N108 512 aa29.46■■■□□ 2.31
ESRRA-202ENST00000405666 ZCCHC11Q5TAX3 1644 aaKnown RBP29.46■■■□□ 2.31
ESRRA-202ENST00000405666 C9orf84Q5VXU9 1444 aa29.45■■■□□ 2.31
ESRRA-202ENST00000405666 HNRNPMP52272 730 aaKnown RBP eCLIP29.42■■■□□ 2.32e-7■■□□□ 13.6
ESRRA-202ENST00000405666 ANKRD50Q9ULJ7 1429 aa29.39■■■□□ 2.3
ESRRA-202ENST00000405666 PZPP20742 1482 aa29.39■■■□□ 2.29
ESRRA-202ENST00000405666 TSPY4P0CV99 314 aa29.38■■■□□ 2.29
ESRRA-202ENST00000405666 TSPY10P0CW01 314 aa29.38■■■□□ 2.29
ESRRA-202ENST00000405666 FOXD1Q16676 465 aa29.38■■■□□ 2.29
ESRRA-202ENST00000405666 ANKRD30BQ9BXX2 1392 aa29.38■■■□□ 2.29
ESRRA-202ENST00000405666 CCDC141Q6ZP82 1450 aa29.37■■■□□ 2.29
ESRRA-202ENST00000405666 SLC4A1APQ9BWU0 796 aaKnown RBP29.36■■■□□ 2.29
ESRRA-202ENST00000405666 ARHGAP5Q13017 1502 aa29.36■■■□□ 2.29
ESRRA-202ENST00000405666 MYO5CQ9NQX4 1742 aa29.35■■■□□ 2.29
ESRRA-202ENST00000405666 RSPH4AQ5TD94 716 aa29.34■■■□□ 2.29
ESRRA-202ENST00000405666 KCNH8Q96L42 1107 aa29.34■■■□□ 2.29
ESRRA-202ENST00000405666 BCL11AQ9H165 835 aa29.32■■■□□ 2.28
ESRRA-202ENST00000405666 SYCP2Q9BX26 1530 aa29.31■■■□□ 2.28
ESRRA-202ENST00000405666 KIF15Q9NS87 1388 aa29.29■■■□□ 2.28
ESRRA-202ENST00000405666 RPRD2Q5VT52 1461 aaKnown RBP29.28■■■□□ 2.28
ESRRA-202ENST00000405666 PLCH2O75038 1416 aa29.28■■■□□ 2.28
ESRRA-202ENST00000405666 KIAA1107Q9UPP5 1409 aa29.28■■■□□ 2.28
ESRRA-202ENST00000405666 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
ESRRA-202ENST00000405666 PLEKHH2Q8IVE3 1493 aa29.26■■■□□ 2.27
ESRRA-202ENST00000405666 MAST1Q9Y2H9 1570 aa29.24■■■□□ 2.27
ESRRA-202ENST00000405666 CENPBP07199 599 aaPredicted RBP29.23■■■□□ 2.27
ESRRA-202ENST00000405666 KDM5DQ9BY66 1539 aa29.21■■■□□ 2.27
ESRRA-202ENST00000405666 L3MBTL2Q969R5 705 aa29.21■■■□□ 2.27
ESRRA-202ENST00000405666 ARHGEF12Q9NZN5 1544 aa29.2■■■□□ 2.27
ESRRA-202ENST00000405666 NUP155O75694 1391 aa29.19■■■□□ 2.26
ESRRA-202ENST00000405666 TEX14Q8IWB6 1497 aa29.18■■■□□ 2.26
ESRRA-202ENST00000405666 WDR7Q9Y4E6 1490 aa29.18■■■□□ 2.26
ESRRA-202ENST00000405666 PKD2Q13563 968 aa29.17■■■□□ 2.26
ESRRA-202ENST00000405666 GTF3C3Q9Y5Q9 886 aa29.17■■■□□ 2.26
ESRRA-202ENST00000405666 EFCAB2Q5VUJ9 269 aa29.17■■■□□ 2.26
ESRRA-202ENST00000405666 HIRIP3Q9BW71 556 aaPredicted RBP29.17■■■□□ 2.26
ESRRA-202ENST00000405666 PRKCSHP14314 528 aaPredicted RBP29.16■■■□□ 2.26
ESRRA-202ENST00000405666 ARAP3Q8WWN8 1544 aa29.14■■■□□ 2.26
ESRRA-202ENST00000405666 ABCC1P33527 1531 aa29.14■■■□□ 2.25
ESRRA-202ENST00000405666 PLXNC1O60486 1568 aa29.12■■■□□ 2.25
ESRRA-202ENST00000405666 DDX10Q13206 875 aaKnown RBP29.07■■■□□ 2.24
ESRRA-202ENST00000405666 ASXL2Q76L83 1435 aa29.05■■■□□ 2.24
ESRRA-202ENST00000405666 TRAPPC8Q9Y2L5 1435 aa29.05■■■□□ 2.24
ESRRA-202ENST00000405666 ABCA9Q8IUA7 1624 aa29.05■■■□□ 2.24
ESRRA-202ENST00000405666 YTHDC1Q96MU7 727 aaKnown RBP29.04■■■□□ 2.24
ESRRA-202ENST00000405666 FAM135AQ9P2D6 1515 aa29.03■■■□□ 2.24
ESRRA-202ENST00000405666 NBPF8Q3BBV2 869 aa29.02■■■□□ 2.24
ESRRA-202ENST00000405666 UNC13BO14795 1591 aa29.02■■■□□ 2.24
ESRRA-202ENST00000405666 DUOX2Q9NRD8 1548 aa29.01■■■□□ 2.24
ESRRA-202ENST00000405666 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
ESRRA-202ENST00000405666 ERBINQ96RT1 1412 aa28.97■■■□□ 2.23
ESRRA-202ENST00000405666 FANCAO15360 1455 aa28.96■■■□□ 2.23
ESRRA-202ENST00000405666 EIF4G2P78344 907 aaKnown RBP eCLIP28.95■■■□□ 2.223e-8■■■■□ 24.1
ESRRA-202ENST00000405666 RTEL1-TNFRSF6BF6WH68 1400 aa28.93■■■□□ 2.22
ESRRA-202ENST00000405666 AFAP1Q8N556 730 aa28.92■■■□□ 2.22
ESRRA-202ENST00000405666 MAGI2Q86UL8 1455 aa28.92■■■□□ 2.22
ESRRA-202ENST00000405666 IQGAP3Q86VI3 1631 aa28.91■■■□□ 2.22
ESRRA-202ENST00000405666 SPAG9O60271 1321 aaKnown RBP28.91■■■□□ 2.22
ESRRA-202ENST00000405666 ZFYVE16Q7Z3T8 1539 aa28.91■■■□□ 2.22
ESRRA-202ENST00000405666 NPM1P06748 294 aaKnown RBP eCLIP28.9■■■□□ 2.22
ESRRA-202ENST00000405666 ERICH6Q7L0X2 663 aa28.87■■■□□ 2.21
ESRRA-202ENST00000405666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.86■■■□□ 2.21
ESRRA-202ENST00000405666 ADGRL1O94910 1474 aa28.84■■■□□ 2.21
ESRRA-202ENST00000405666 SPATA31E1Q6ZUB1 1445 aa28.84■■■□□ 2.21
ESRRA-202ENST00000405666 WASHC2AQ641Q2 1341 aa28.84■■■□□ 2.21
ESRRA-202ENST00000405666 UHRF1BP1Q6BDS2 1440 aa28.82■■■□□ 2.2
ESRRA-202ENST00000405666 SCAPERQ9BY12 1400 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms