RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 KANK1Q14678 1352 aa17.01■□□□□ 0.31
SNED1-205ENST00000405547 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
SNED1-205ENST00000405547 U2SURPO15042 1029 aaKnown RBP17.01■□□□□ 0.31
SNED1-205ENST00000405547 POGKQ9P215 609 aa17.01■□□□□ 0.31
SNED1-205ENST00000405547 PLCB2Q00722 1185 aa17■□□□□ 0.31
SNED1-205ENST00000405547 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
SNED1-205ENST00000405547 MCCP23508 829 aa16.99■□□□□ 0.31
SNED1-205ENST00000405547 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
SNED1-205ENST00000405547 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
SNED1-205ENST00000405547 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
SNED1-205ENST00000405547 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
SNED1-205ENST00000405547 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
SNED1-205ENST00000405547 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.3
SNED1-205ENST00000405547 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
SNED1-205ENST00000405547 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
SNED1-205ENST00000405547 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
SNED1-205ENST00000405547 PKD2Q13563 968 aa16.95■□□□□ 0.3
SNED1-205ENST00000405547 KCNJ4P48050 445 aa16.94■□□□□ 0.3
SNED1-205ENST00000405547 GOLGA6L4A6NEF3 574 aa16.94■□□□□ 0.3
SNED1-205ENST00000405547 PHLDB1Q86UU1 1377 aa16.93■□□□□ 0.3
SNED1-205ENST00000405547 FGD1P98174 961 aa16.93■□□□□ 0.3
SNED1-205ENST00000405547 RWDD1Q9H446 243 aaPredicted RBP16.93■□□□□ 0.3
SNED1-205ENST00000405547 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
SNED1-205ENST00000405547 OS9Q13438 667 aaPredicted RBP16.92■□□□□ 0.3
SNED1-205ENST00000405547 PMFBP1Q8TBY8 1022 aa16.92■□□□□ 0.3
SNED1-205ENST00000405547 SPRYD3Q8NCJ5 442 aa16.9■□□□□ 0.3
SNED1-205ENST00000405547 FOXD1Q16676 465 aa16.9■□□□□ 0.3
SNED1-205ENST00000405547 NLRP13Q86W25 1043 aa16.89■□□□□ 0.29
SNED1-205ENST00000405547 CALD1Q05682 793 aaKnown RBP16.89■□□□□ 0.29
SNED1-205ENST00000405547 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
SNED1-205ENST00000405547 ANKRD30AQ9BXX3 1397 aa16.88■□□□□ 0.29
SNED1-205ENST00000405547 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
SNED1-205ENST00000405547 RAPGEF2Q9Y4G8 1499 aa16.87■□□□□ 0.29
SNED1-205ENST00000405547 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
SNED1-205ENST00000405547 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
SNED1-205ENST00000405547 NUP155O75694 1391 aa16.86■□□□□ 0.29
SNED1-205ENST00000405547 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
SNED1-205ENST00000405547 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
SNED1-205ENST00000405547 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
SNED1-205ENST00000405547 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
SNED1-205ENST00000405547 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
SNED1-205ENST00000405547 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
SNED1-205ENST00000405547 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
SNED1-205ENST00000405547 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
SNED1-205ENST00000405547 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
SNED1-205ENST00000405547 GOLGA6L3A6NEY3 463 aa16.84■□□□□ 0.29
SNED1-205ENST00000405547 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.29
SNED1-205ENST00000405547 DRC7Q8IY82 874 aa16.83■□□□□ 0.29
SNED1-205ENST00000405547 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.29
SNED1-205ENST00000405547 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
SNED1-205ENST00000405547 A0A0G2JS52 829 aa16.82■□□□□ 0.28
SNED1-205ENST00000405547 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
SNED1-205ENST00000405547 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
SNED1-205ENST00000405547 ITPRIPQ8IWB1 547 aa16.8■□□□□ 0.28
SNED1-205ENST00000405547 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
SNED1-205ENST00000405547 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNED1-205ENST00000405547 HDGFP51858 240 aaKnown RBP16.78■□□□□ 0.28
SNED1-205ENST00000405547 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
SNED1-205ENST00000405547 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
SNED1-205ENST00000405547 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
SNED1-205ENST00000405547 MYBBP1AQ9BQG0 1328 aaKnown RBP16.78■□□□□ 0.28
SNED1-205ENST00000405547 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.28
SNED1-205ENST00000405547 CENPJQ9HC77 1338 aaPredicted RBP16.76■□□□□ 0.27
SNED1-205ENST00000405547 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
SNED1-205ENST00000405547 RSPH4AQ5TD94 716 aa16.74■□□□□ 0.27
SNED1-205ENST00000405547 PRKRIP1Q9H875 184 aaPredicted RBP16.74■□□□□ 0.27
SNED1-205ENST00000405547 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
SNED1-205ENST00000405547 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
SNED1-205ENST00000405547 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
SNED1-205ENST00000405547 MFAP1P55081 439 aaKnown RBP16.73■□□□□ 0.27
SNED1-205ENST00000405547 DDX11L8A8MPP1 907 aa16.73■□□□□ 0.27
SNED1-205ENST00000405547 FAM161AQ3B820 660 aa16.73■□□□□ 0.27
SNED1-205ENST00000405547 FHOD3Q2V2M9 1422 aa16.72■□□□□ 0.27
SNED1-205ENST00000405547 PDE4AP27815 886 aa16.72■□□□□ 0.27
SNED1-205ENST00000405547 PHF14O94880 888 aa16.72■□□□□ 0.27
SNED1-205ENST00000405547 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
SNED1-205ENST00000405547 PDS5BQ9NTI5 1447 aa16.71■□□□□ 0.27
SNED1-205ENST00000405547 GSE1Q14687 1217 aa16.71■□□□□ 0.27
SNED1-205ENST00000405547 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
SNED1-205ENST00000405547 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
SNED1-205ENST00000405547 HMMRO75330 724 aa16.69■□□□□ 0.26
SNED1-205ENST00000405547 SAFB2Q14151 953 aaKnown RBP eCLIP16.68■□□□□ 0.26
SNED1-205ENST00000405547 APBB1O00213 710 aa16.68■□□□□ 0.26
SNED1-205ENST00000405547 ST18O60284 1047 aa16.67■□□□□ 0.26
SNED1-205ENST00000405547 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
SNED1-205ENST00000405547 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
SNED1-205ENST00000405547 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
SNED1-205ENST00000405547 TERF2IPQ9NYB0 399 aa16.66■□□□□ 0.26
SNED1-205ENST00000405547 USP47Q96K76 1375 aa16.66■□□□□ 0.26
SNED1-205ENST00000405547 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
SNED1-205ENST00000405547 GNL2Q13823 731 aaKnown RBP16.65■□□□□ 0.26
SNED1-205ENST00000405547 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
SNED1-205ENST00000405547 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
SNED1-205ENST00000405547 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
SNED1-205ENST00000405547 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
SNED1-205ENST00000405547 SKOR2Q2VWA4 1001 aaPredicted RBP16.65■□□□□ 0.26
SNED1-205ENST00000405547 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.25
SNED1-205ENST00000405547 CUX1P39880 1505 aa16.64■□□□□ 0.25
SNED1-205ENST00000405547 STK26Q9P289 416 aa16.64■□□□□ 0.25
SNED1-205ENST00000405547 CGNL1Q0VF96 1302 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms