RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
TNFSF11-204ENST00000405262 GLI2P10070 1586 aa13.39□□□□□ -0.27
TNFSF11-204ENST00000405262 USP35Q9P2H5 1018 aa13.39□□□□□ -0.27
TNFSF11-204ENST00000405262 KDM6BO15054 1643 aa13.38□□□□□ -0.27
TNFSF11-204ENST00000405262 PPRC1Q5VV67 1664 aaKnown RBP13.38□□□□□ -0.27
TNFSF11-204ENST00000405262 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
TNFSF11-204ENST00000405262 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
TNFSF11-204ENST00000405262 IPO9Q96P70 1041 aaKnown RBP13.38□□□□□ -0.27
TNFSF11-204ENST00000405262 ABCA8O94911 1581 aa13.38□□□□□ -0.27
TNFSF11-204ENST00000405262 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
TNFSF11-204ENST00000405262 EPRSP07814 1512 aaKnown RBP13.37□□□□□ -0.27
TNFSF11-204ENST00000405262 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
TNFSF11-204ENST00000405262 ANP32AP39687 249 aaKnown RBP13.36□□□□□ -0.27
TNFSF11-204ENST00000405262 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
TNFSF11-204ENST00000405262 WASHC2CQ9Y4E1 1318 aa13.34□□□□□ -0.27
TNFSF11-204ENST00000405262 MAP3K4Q9Y6R4 1608 aa13.34□□□□□ -0.27
TNFSF11-204ENST00000405262 WDR7Q9Y4E6 1490 aa13.33□□□□□ -0.27
TNFSF11-204ENST00000405262 SAMD9Q5K651 1589 aa13.33□□□□□ -0.28
TNFSF11-204ENST00000405262 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
TNFSF11-204ENST00000405262 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
TNFSF11-204ENST00000405262 HNRNPUQ00839 825 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNFSF11-204ENST00000405262 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
TNFSF11-204ENST00000405262 ARID3CA6NKF2 412 aa13.29□□□□□ -0.28
TNFSF11-204ENST00000405262 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
TNFSF11-204ENST00000405262 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
TNFSF11-204ENST00000405262 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
TNFSF11-204ENST00000405262 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
TNFSF11-204ENST00000405262 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
TNFSF11-204ENST00000405262 ATP10BO94823 1461 aa13.26□□□□□ -0.29
TNFSF11-204ENST00000405262 TEX14Q8IWB6 1497 aa13.26□□□□□ -0.29
TNFSF11-204ENST00000405262 FHOD3Q2V2M9 1422 aa13.25□□□□□ -0.29
TNFSF11-204ENST00000405262 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
TNFSF11-204ENST00000405262 KANK4Q5T7N3 995 aaPredicted RBP13.24□□□□□ -0.29
TNFSF11-204ENST00000405262 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
TNFSF11-204ENST00000405262 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
TNFSF11-204ENST00000405262 B4GALNT3Q6L9W6 998 aa13.24□□□□□ -0.29
TNFSF11-204ENST00000405262 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
TNFSF11-204ENST00000405262 PKNOX2Q96KN3 472 aa13.23□□□□□ -0.29
TNFSF11-204ENST00000405262 RSPH6AQ9H0K4 717 aa13.23□□□□□ -0.29
TNFSF11-204ENST00000405262 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
TNFSF11-204ENST00000405262 MAGI3Q5TCQ9 1506 aa13.22□□□□□ -0.29
TNFSF11-204ENST00000405262 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
TNFSF11-204ENST00000405262 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
TNFSF11-204ENST00000405262 ZBED9Q6R2W3 1325 aa13.21□□□□□ -0.29
TNFSF11-204ENST00000405262 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.29
TNFSF11-204ENST00000405262 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
TNFSF11-204ENST00000405262 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
TNFSF11-204ENST00000405262 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
TNFSF11-204ENST00000405262 NEFMP07197 916 aa13.16□□□□□ -0.3
TNFSF11-204ENST00000405262 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
TNFSF11-204ENST00000405262 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
TNFSF11-204ENST00000405262 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
TNFSF11-204ENST00000405262 ADGRL1O94910 1474 aa13.14□□□□□ -0.31
TNFSF11-204ENST00000405262 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
TNFSF11-204ENST00000405262 NCOA2Q15596 1464 aa13.13□□□□□ -0.31
TNFSF11-204ENST00000405262 ARHGAP35Q9NRY4 1499 aa13.12□□□□□ -0.31
TNFSF11-204ENST00000405262 GSE1Q14687 1217 aa13.12□□□□□ -0.31
TNFSF11-204ENST00000405262 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
TNFSF11-204ENST00000405262 FAM43AQ8N2R8 423 aa13.11□□□□□ -0.31
TNFSF11-204ENST00000405262 CDK13Q14004 1512 aaKnown RBP13.11□□□□□ -0.31
TNFSF11-204ENST00000405262 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
TNFSF11-204ENST00000405262 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
TNFSF11-204ENST00000405262 TIAM1Q13009 1591 aa13.09□□□□□ -0.31
TNFSF11-204ENST00000405262 CNTLNQ9NXG0 1405 aa13.08□□□□□ -0.32
TNFSF11-204ENST00000405262 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
TNFSF11-204ENST00000405262 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
TNFSF11-204ENST00000405262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNFSF11-204ENST00000405262 TCERG1O14776 1098 aaKnown RBP13.07□□□□□ -0.32
TNFSF11-204ENST00000405262 NEO1Q92859 1461 aa13.07□□□□□ -0.32
TNFSF11-204ENST00000405262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNFSF11-204ENST00000405262 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
TNFSF11-204ENST00000405262 FMN1Q68DA7 1419 aa13.06□□□□□ -0.32
TNFSF11-204ENST00000405262 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
TNFSF11-204ENST00000405262 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
TNFSF11-204ENST00000405262 MS4A1P11836 297 aa13.06□□□□□ -0.32
TNFSF11-204ENST00000405262 DDRGK1Q96HY6 314 aa13.06□□□□□ -0.32
TNFSF11-204ENST00000405262 FRMPD1Q5SYB0 1578 aa13.05□□□□□ -0.32
TNFSF11-204ENST00000405262 HECW1Q76N89 1606 aa13.05□□□□□ -0.32
TNFSF11-204ENST00000405262 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
TNFSF11-204ENST00000405262 NUDCQ9Y266 331 aa13.03□□□□□ -0.32
TNFSF11-204ENST00000405262 LAS1LQ9Y4W2 734 aaKnown RBP13.03□□□□□ -0.32
TNFSF11-204ENST00000405262 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
TNFSF11-204ENST00000405262 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.33
TNFSF11-204ENST00000405262 FANCAO15360 1455 aa13.01□□□□□ -0.33
TNFSF11-204ENST00000405262 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
TNFSF11-204ENST00000405262 AKNAQ7Z591 1439 aa13□□□□□ -0.33
TNFSF11-204ENST00000405262 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
TNFSF11-204ENST00000405262 BACH2Q9BYV9 841 aa12.99□□□□□ -0.33
TNFSF11-204ENST00000405262 KIF14Q15058 1648 aa12.99□□□□□ -0.33
TNFSF11-204ENST00000405262 CFAP74Q9C0B2 1584 aa12.99□□□□□ -0.33
TNFSF11-204ENST00000405262 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
TNFSF11-204ENST00000405262 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
TNFSF11-204ENST00000405262 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
TNFSF11-204ENST00000405262 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
TNFSF11-204ENST00000405262 PDE4AP27815 886 aa12.98□□□□□ -0.33
TNFSF11-204ENST00000405262 PLCH2O75038 1416 aa12.96□□□□□ -0.33
TNFSF11-204ENST00000405262 NFKBIBQ15653 356 aa12.96□□□□□ -0.33
TNFSF11-204ENST00000405262 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
TNFSF11-204ENST00000405262 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
TNFSF11-204ENST00000405262 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms