RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 GRIN2AQ12879 1464 aa10.76□□□□□ -0.69
LTBP1-202ENST00000404525 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
LTBP1-202ENST00000404525 CCDC136Q96JN2 1154 aa10.76□□□□□ -0.69
LTBP1-202ENST00000404525 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
LTBP1-202ENST00000404525 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
LTBP1-202ENST00000404525 KANK1Q14678 1352 aa10.75□□□□□ -0.69
LTBP1-202ENST00000404525 IQGAP2Q13576 1575 aa10.75□□□□□ -0.69
LTBP1-202ENST00000404525 WDR62O43379 1518 aa10.75□□□□□ -0.69
LTBP1-202ENST00000404525 CASKIN1Q8WXD9 1431 aa10.74□□□□□ -0.69
LTBP1-202ENST00000404525 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
LTBP1-202ENST00000404525 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
LTBP1-202ENST00000404525 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
LTBP1-202ENST00000404525 ANKRD30AQ9BXX3 1397 aa10.72□□□□□ -0.69
LTBP1-202ENST00000404525 HSP90AA1P07900 732 aaKnown RBP10.72□□□□□ -0.69
LTBP1-202ENST00000404525 FYCO1Q9BQS8 1478 aa10.72□□□□□ -0.69
LTBP1-202ENST00000404525 MRS2Q9HD23 443 aa10.71□□□□□ -0.69
LTBP1-202ENST00000404525 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.7
LTBP1-202ENST00000404525 TMC1Q8TDI8 760 aa10.7□□□□□ -0.7
LTBP1-202ENST00000404525 IPO9Q96P70 1041 aaKnown RBP10.69□□□□□ -0.7
LTBP1-202ENST00000404525 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
LTBP1-202ENST00000404525 SPAG9O60271 1321 aaKnown RBP10.69□□□□□ -0.7
LTBP1-202ENST00000404525 HNRNPMP52272 730 aaKnown RBP eCLIP10.68□□□□□ -0.7
LTBP1-202ENST00000404525 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
LTBP1-202ENST00000404525 HECW1Q76N89 1606 aa10.68□□□□□ -0.7
LTBP1-202ENST00000404525 SALL2Q9Y467 1007 aaPredicted RBP10.67□□□□□ -0.7
LTBP1-202ENST00000404525 RRBP1Q9P2E9 1410 aaKnown RBP10.66□□□□□ -0.7
LTBP1-202ENST00000404525 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
LTBP1-202ENST00000404525 PPM1GO15355 546 aaPredicted RBP10.65□□□□□ -0.7
LTBP1-202ENST00000404525 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
LTBP1-202ENST00000404525 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
LTBP1-202ENST00000404525 EIF4G3O43432 1585 aaKnown RBP10.64□□□□□ -0.71
LTBP1-202ENST00000404525 MLECQ14165 292 aa10.64□□□□□ -0.71
LTBP1-202ENST00000404525 GGT6Q6P531 493 aa10.64□□□□□ -0.71
LTBP1-202ENST00000404525 UACAQ9BZF9 1416 aa10.64□□□□□ -0.71
LTBP1-202ENST00000404525 WDR97A6NE52 1622 aa10.64□□□□□ -0.71
LTBP1-202ENST00000404525 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
LTBP1-202ENST00000404525 EIF4G2P78344 907 aaKnown RBP eCLIP10.63□□□□□ -0.71
LTBP1-202ENST00000404525 RGL3Q3MIN7 710 aa10.63□□□□□ -0.71
LTBP1-202ENST00000404525 MYOM3Q5VTT5 1437 aa10.63□□□□□ -0.71
LTBP1-202ENST00000404525 ADAMTS12P58397 1594 aa10.62□□□□□ -0.71
LTBP1-202ENST00000404525 WDR43Q15061 677 aaKnown RBP eCLIP10.62□□□□□ -0.71
LTBP1-202ENST00000404525 EHBP1L1Q8N3D4 1523 aa10.61□□□□□ -0.71
LTBP1-202ENST00000404525 PAK3O75914 559 aaPredicted RBP10.61□□□□□ -0.71
LTBP1-202ENST00000404525 KIF3BO15066 747 aa10.6□□□□□ -0.71
LTBP1-202ENST00000404525 NCOA2Q15596 1464 aa10.6□□□□□ -0.71
LTBP1-202ENST00000404525 NUP155O75694 1391 aa10.6□□□□□ -0.71
LTBP1-202ENST00000404525 FGD6Q6ZV73 1430 aa10.6□□□□□ -0.71
LTBP1-202ENST00000404525 TROQ12816 1431 aaPredicted RBP10.59□□□□□ -0.71
LTBP1-202ENST00000404525 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
LTBP1-202ENST00000404525 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
LTBP1-202ENST00000404525 PBRM1Q86U86 1689 aa10.59□□□□□ -0.71
LTBP1-202ENST00000404525 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
LTBP1-202ENST00000404525 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
LTBP1-202ENST00000404525 PKD2Q13563 968 aa10.58□□□□□ -0.72
LTBP1-202ENST00000404525 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
LTBP1-202ENST00000404525 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
LTBP1-202ENST00000404525 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
LTBP1-202ENST00000404525 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
LTBP1-202ENST00000404525 ABCA5Q8WWZ7 1642 aa10.57□□□□□ -0.72
LTBP1-202ENST00000404525 ZBED9Q6R2W3 1325 aa10.56□□□□□ -0.72
LTBP1-202ENST00000404525 MPHOSPH9Q99550 1183 aa10.56□□□□□ -0.72
LTBP1-202ENST00000404525 HSPA5P11021 654 aaKnown RBP10.55□□□□□ -0.72
LTBP1-202ENST00000404525 WASHC2CQ9Y4E1 1318 aa10.55□□□□□ -0.72
LTBP1-202ENST00000404525 PLEKHH2Q8IVE3 1493 aa10.55□□□□□ -0.72
LTBP1-202ENST00000404525 PHLDB1Q86UU1 1377 aa10.55□□□□□ -0.72
LTBP1-202ENST00000404525 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
LTBP1-202ENST00000404525 SUPT6HQ7KZ85 1726 aaKnown RBP10.54□□□□□ -0.72
LTBP1-202ENST00000404525 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
LTBP1-202ENST00000404525 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
LTBP1-202ENST00000404525 MIA2Q96PC5 1412 aa10.53□□□□□ -0.72
LTBP1-202ENST00000404525 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
LTBP1-202ENST00000404525 BECN1Q14457 450 aa10.53□□□□□ -0.72
LTBP1-202ENST00000404525 THOC2Q8NI27 1593 aaKnown RBP10.52□□□□□ -0.73
LTBP1-202ENST00000404525 CARD11Q9BXL7 1154 aa10.52□□□□□ -0.73
LTBP1-202ENST00000404525 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
LTBP1-202ENST00000404525 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
LTBP1-202ENST00000404525 ZNF644Q9H582 1327 aaPredicted RBP10.51□□□□□ -0.73
LTBP1-202ENST00000404525 UGGT2Q9NYU1 1516 aa10.51□□□□□ -0.73
LTBP1-202ENST00000404525 SENP3Q9H4L4 574 aaPredicted RBP10.51□□□□□ -0.73
LTBP1-202ENST00000404525 MAPKBP1O60336 1514 aa10.51□□□□□ -0.73
LTBP1-202ENST00000404525 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
LTBP1-202ENST00000404525 DCAF11Q8TEB1 546 aa10.51□□□□□ -0.73
LTBP1-202ENST00000404525 MYH16Q9H6N6 1097 aa10.51□□□□□ -0.73
LTBP1-202ENST00000404525 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
LTBP1-202ENST00000404525 NUP160Q12769 1436 aa10.5□□□□□ -0.73
LTBP1-202ENST00000404525 MAP3K1Q13233 1512 aa10.5□□□□□ -0.73
LTBP1-202ENST00000404525 KIF15Q9NS87 1388 aa10.49□□□□□ -0.73
LTBP1-202ENST00000404525 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
LTBP1-202ENST00000404525 KIF14Q15058 1648 aa10.49□□□□□ -0.73
LTBP1-202ENST00000404525 ARXQ96QS3 562 aa10.48□□□□□ -0.73
LTBP1-202ENST00000404525 FOXD1Q16676 465 aa10.48□□□□□ -0.73
LTBP1-202ENST00000404525 KIAA0556O60303 1618 aa10.48□□□□□ -0.73
LTBP1-202ENST00000404525 RAPGEF6Q8TEU7 1601 aa10.48□□□□□ -0.73
LTBP1-202ENST00000404525 GSE1Q14687 1217 aa10.48□□□□□ -0.73
LTBP1-202ENST00000404525 UBE2Q2Q8WVN8 375 aa10.47□□□□□ -0.73
LTBP1-202ENST00000404525 POGKQ9P215 609 aa10.47□□□□□ -0.73
LTBP1-202ENST00000404525 SENP3-EIF4A1A0A087X0R7 540 aa10.46□□□□□ -0.73
LTBP1-202ENST00000404525 GOLGA6L22H0YM25 854 aa10.46□□□□□ -0.73
LTBP1-202ENST00000404525 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.74
LTBP1-202ENST00000404525 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms