RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 FKBP8Q14318 412 aa10.57□□□□□ -0.72
NLRC4-204ENST00000404025 PRG4Q92954 1404 aaPredicted RBP10.57□□□□□ -0.72
NLRC4-204ENST00000404025 NUP153P49790 1475 aaKnown RBP10.56□□□□□ -0.72
NLRC4-204ENST00000404025 NEFLP07196 543 aa10.56□□□□□ -0.72
NLRC4-204ENST00000404025 DAPK1P53355 1430 aa10.56□□□□□ -0.72
NLRC4-204ENST00000404025 KIAA0556O60303 1618 aa10.56□□□□□ -0.72
NLRC4-204ENST00000404025 ZNF326Q5BKZ1 582 aaKnown RBP10.55□□□□□ -0.72
NLRC4-204ENST00000404025 PLEKHD1A6NEE1 506 aa10.55□□□□□ -0.72
NLRC4-204ENST00000404025 KDM6BO15054 1643 aa10.55□□□□□ -0.72
NLRC4-204ENST00000404025 ABCC5O15440 1437 aa10.55□□□□□ -0.72
NLRC4-204ENST00000404025 EIF4G3O43432 1585 aaKnown RBP10.55□□□□□ -0.72
NLRC4-204ENST00000404025 PLB1Q6P1J6 1458 aa10.55□□□□□ -0.72
NLRC4-204ENST00000404025 CARMIL2Q6F5E8 1435 aa10.54□□□□□ -0.72
NLRC4-204ENST00000404025 CNGB1Q14028 1251 aaPredicted RBP10.54□□□□□ -0.72
NLRC4-204ENST00000404025 POLR3GLQ9BT43 218 aa10.54□□□□□ -0.72
NLRC4-204ENST00000404025 AKNAQ7Z591 1439 aa10.53□□□□□ -0.72
NLRC4-204ENST00000404025 WASHC2AQ641Q2 1341 aa10.53□□□□□ -0.72
NLRC4-204ENST00000404025 HNRNPUQ00839 825 aaKnown RBP eCLIP10.52□□□□□ -0.72
NLRC4-204ENST00000404025 TROQ12816 1431 aaPredicted RBP10.52□□□□□ -0.72
NLRC4-204ENST00000404025 RAPGEF6Q8TEU7 1601 aa10.52□□□□□ -0.73
NLRC4-204ENST00000404025 SYNJ2O15056 1496 aa10.52□□□□□ -0.73
NLRC4-204ENST00000404025 DENND4BO75064 1496 aaPredicted RBP10.52□□□□□ -0.73
NLRC4-204ENST00000404025 ROCK1Q13464 1354 aa10.51□□□□□ -0.73
NLRC4-204ENST00000404025 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
NLRC4-204ENST00000404025 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
NLRC4-204ENST00000404025 GCC2Q8IWJ2 1684 aa10.5□□□□□ -0.73
NLRC4-204ENST00000404025 ANKRD30BQ9BXX2 1392 aa10.5□□□□□ -0.73
NLRC4-204ENST00000404025 PKD2Q13563 968 aa10.49□□□□□ -0.73
NLRC4-204ENST00000404025 TSPY4P0CV99 314 aa10.49□□□□□ -0.73
NLRC4-204ENST00000404025 TSPY10P0CW01 314 aa10.49□□□□□ -0.73
NLRC4-204ENST00000404025 KDM5BQ9UGL1 1544 aa10.48□□□□□ -0.73
NLRC4-204ENST00000404025 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
NLRC4-204ENST00000404025 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
NLRC4-204ENST00000404025 CAMSAP2Q08AD1 1489 aa10.48□□□□□ -0.73
NLRC4-204ENST00000404025 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
NLRC4-204ENST00000404025 GPATCH8Q9UKJ3 1502 aaKnown RBP10.47□□□□□ -0.73
NLRC4-204ENST00000404025 FAM9BQ8IZU0 186 aa10.47□□□□□ -0.73
NLRC4-204ENST00000404025 DNMT1P26358 1616 aaKnown RBP10.46□□□□□ -0.73
NLRC4-204ENST00000404025 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.73
NLRC4-204ENST00000404025 NCOA1Q15788 1441 aa10.46□□□□□ -0.74
NLRC4-204ENST00000404025 RPRD2Q5VT52 1461 aaKnown RBP10.45□□□□□ -0.74
NLRC4-204ENST00000404025 MRS2Q9HD23 443 aa10.45□□□□□ -0.74
NLRC4-204ENST00000404025 NUP155O75694 1391 aa10.44□□□□□ -0.74
NLRC4-204ENST00000404025 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
NLRC4-204ENST00000404025 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
NLRC4-204ENST00000404025 CCDC184Q52MB2 194 aa10.44□□□□□ -0.74
NLRC4-204ENST00000404025 NUP160Q12769 1436 aa10.43□□□□□ -0.74
NLRC4-204ENST00000404025 KIF14Q15058 1648 aa10.43□□□□□ -0.74
NLRC4-204ENST00000404025 PTPRGP23470 1445 aa10.43□□□□□ -0.74
NLRC4-204ENST00000404025 IRX6P78412 446 aaPredicted RBP10.43□□□□□ -0.74
NLRC4-204ENST00000404025 TSHZ2Q9NRE2 1034 aa10.43□□□□□ -0.74
NLRC4-204ENST00000404025 ANKRD50Q9ULJ7 1429 aa10.43□□□□□ -0.74
NLRC4-204ENST00000404025 CNTLNQ9NXG0 1405 aa10.43□□□□□ -0.74
NLRC4-204ENST00000404025 PRKRIP1Q9H875 184 aaPredicted RBP10.42□□□□□ -0.74
NLRC4-204ENST00000404025 KIF7Q2M1P5 1343 aa10.42□□□□□ -0.74
NLRC4-204ENST00000404025 ATP10BO94823 1461 aa10.41□□□□□ -0.74
NLRC4-204ENST00000404025 PZPP20742 1482 aa10.41□□□□□ -0.74
NLRC4-204ENST00000404025 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
NLRC4-204ENST00000404025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.4□□□□□ -0.74
NLRC4-204ENST00000404025 TEX14Q8IWB6 1497 aa10.4□□□□□ -0.75
NLRC4-204ENST00000404025 C9orf84Q5VXU9 1444 aa10.39□□□□□ -0.75
NLRC4-204ENST00000404025 ITSN2Q9NZM3 1697 aa10.39□□□□□ -0.75
NLRC4-204ENST00000404025 CARD11Q9BXL7 1154 aa10.39□□□□□ -0.75
NLRC4-204ENST00000404025 DCAF11Q8TEB1 546 aa10.38□□□□□ -0.75
NLRC4-204ENST00000404025 KIF15Q9NS87 1388 aa10.38□□□□□ -0.75
NLRC4-204ENST00000404025 USP47Q96K76 1375 aa10.37□□□□□ -0.75
NLRC4-204ENST00000404025 RGL3Q3MIN7 710 aa10.36□□□□□ -0.75
NLRC4-204ENST00000404025 ADGRL2O95490 1459 aa10.36□□□□□ -0.75
NLRC4-204ENST00000404025 SENP3-EIF4A1A0A087X0R7 540 aa10.36□□□□□ -0.75
NLRC4-204ENST00000404025 ERICH6Q7L0X2 663 aa10.35□□□□□ -0.75
NLRC4-204ENST00000404025 ABCA8O94911 1581 aa10.35□□□□□ -0.75
NLRC4-204ENST00000404025 ABCC10Q5T3U5 1492 aa10.34□□□□□ -0.75
NLRC4-204ENST00000404025 SPATA31E1Q6ZUB1 1445 aa10.34□□□□□ -0.75
NLRC4-204ENST00000404025 ADGBQ8N7X0 1667 aa10.33□□□□□ -0.76
NLRC4-204ENST00000404025 ADCY10Q96PN6 1610 aa10.33□□□□□ -0.76
NLRC4-204ENST00000404025 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
NLRC4-204ENST00000404025 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
NLRC4-204ENST00000404025 CDC42BPAQ5VT25 1732 aa10.31□□□□□ -0.76
NLRC4-204ENST00000404025 TMC1Q8TDI8 760 aa10.31□□□□□ -0.76
NLRC4-204ENST00000404025 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
NLRC4-204ENST00000404025 SHANK2Q9UPX8 1470 aa10.29□□□□□ -0.76
NLRC4-204ENST00000404025 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
NLRC4-204ENST00000404025 MYT1LQ9UL68 1186 aa10.29□□□□□ -0.76
NLRC4-204ENST00000404025 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
NLRC4-204ENST00000404025 ZBED9Q6R2W3 1325 aa10.29□□□□□ -0.76
NLRC4-204ENST00000404025 CROCC2H7BZ55 1655 aa10.28□□□□□ -0.76
NLRC4-204ENST00000404025 MBD5Q9P267 1494 aa10.28□□□□□ -0.76
NLRC4-204ENST00000404025 CCDC144AA2RUR9 1427 aa10.27□□□□□ -0.77
NLRC4-204ENST00000404025 RBM19Q9Y4C8 960 aaKnown RBP10.27□□□□□ -0.77
NLRC4-204ENST00000404025 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
NLRC4-204ENST00000404025 EFCAB2Q5VUJ9 269 aa10.26□□□□□ -0.77
NLRC4-204ENST00000404025 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
NLRC4-204ENST00000404025 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
NLRC4-204ENST00000404025 SYCP2Q9BX26 1530 aa10.25□□□□□ -0.77
NLRC4-204ENST00000404025 PPP4R2Q9NY27 417 aa10.25□□□□□ -0.77
NLRC4-204ENST00000404025 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
NLRC4-204ENST00000404025 RALGAPBQ86X10 1494 aa10.24□□□□□ -0.77
NLRC4-204ENST00000404025 SAMD9LQ8IVG5 1584 aa10.24□□□□□ -0.77
NLRC4-204ENST00000404025 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
NLRC4-204ENST00000404025 UHRF1BP1Q6BDS2 1440 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms