RNA–Protein interactions for RNA: ENST00000403946.7

OTOF-205, Transcript of otoferlin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OTOF, Length 6,937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-205ENST00000403946 GOLGA3Q08378 1498 aa14.21□□□□□ -0.14
OTOF-205ENST00000403946 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.14
OTOF-205ENST00000403946 G3V3G9 751 aa14.2□□□□□ -0.14
OTOF-205ENST00000403946 DCAF8Q5TAQ9 597 aa14.2□□□□□ -0.14
OTOF-205ENST00000403946 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
OTOF-205ENST00000403946 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
OTOF-205ENST00000403946 HNRNPMP52272 730 aaKnown RBP eCLIP14.19□□□□□ -0.14
OTOF-205ENST00000403946 OS9Q13438 667 aaPredicted RBP14.18□□□□□ -0.14
OTOF-205ENST00000403946 SPAG9O60271 1321 aaKnown RBP14.16□□□□□ -0.14
OTOF-205ENST00000403946 CC2D1BQ5T0F9 858 aaKnown RBP14.15□□□□□ -0.14
OTOF-205ENST00000403946 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
OTOF-205ENST00000403946 HDGFL2Q7Z4V5 671 aaPredicted RBP14.15□□□□□ -0.14
OTOF-205ENST00000403946 RTF1Q92541 710 aaKnown RBP14.14□□□□□ -0.15
OTOF-205ENST00000403946 L1TD1Q5T7N2 865 aaKnown RBP14.13□□□□□ -0.15
OTOF-205ENST00000403946 PIP4K2BP78356 416 aa14.13□□□□□ -0.15
OTOF-205ENST00000403946 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
OTOF-205ENST00000403946 SUPT16HQ9Y5B9 1047 aaKnown RBP14.1□□□□□ -0.15
OTOF-205ENST00000403946 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
OTOF-205ENST00000403946 MSNP26038 577 aaKnown RBP14.09□□□□□ -0.15
OTOF-205ENST00000403946 EEA1Q15075 1411 aa14.09□□□□□ -0.15
OTOF-205ENST00000403946 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
OTOF-205ENST00000403946 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
OTOF-205ENST00000403946 CHAF1AQ13111 956 aaPredicted RBP14.07□□□□□ -0.16
OTOF-205ENST00000403946 SF3B2Q13435 895 aaKnown RBP14.07□□□□□ -0.16
OTOF-205ENST00000403946 CLSTN1O94985 981 aa14.06□□□□□ -0.16
OTOF-205ENST00000403946 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
OTOF-205ENST00000403946 PTPRGP23470 1445 aa14.06□□□□□ -0.16
OTOF-205ENST00000403946 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
OTOF-205ENST00000403946 ATF3P18847 181 aa14.05□□□□□ -0.16
OTOF-205ENST00000403946 PPP1R1BQ9UD71 204 aaPredicted RBP14.05□□□□□ -0.16
OTOF-205ENST00000403946 TMF1P82094 1093 aa14.05□□□□□ -0.16
OTOF-205ENST00000403946 PKD2Q13563 968 aa14.05□□□□□ -0.16
OTOF-205ENST00000403946 FOXD1Q16676 465 aa14.04□□□□□ -0.16
OTOF-205ENST00000403946 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
OTOF-205ENST00000403946 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
OTOF-205ENST00000403946 NUTM2BA6NNL0 878 aaPredicted RBP14.04□□□□□ -0.16
OTOF-205ENST00000403946 NUTM2EB1AL46 878 aaPredicted RBP14.04□□□□□ -0.16
OTOF-205ENST00000403946 NUTM2AQ8IVF1 878 aaPredicted RBP14.04□□□□□ -0.16
OTOF-205ENST00000403946 TNNT3P45378 269 aaPredicted RBP14.04□□□□□ -0.16
OTOF-205ENST00000403946 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
OTOF-205ENST00000403946 AMPHP49418 695 aa14.03□□□□□ -0.16
OTOF-205ENST00000403946 PPP4R2Q9NY27 417 aa14.03□□□□□ -0.16
OTOF-205ENST00000403946 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.16
OTOF-205ENST00000403946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.01□□□□□ -0.17
OTOF-205ENST00000403946 RBM19Q9Y4C8 960 aaKnown RBP14.01□□□□□ -0.17
OTOF-205ENST00000403946 CHMP3Q9Y3E7 222 aa14.01□□□□□ -0.17
OTOF-205ENST00000403946 ZRSR1Q15695 479 aaKnown RBP14.01□□□□□ -0.17
OTOF-205ENST00000403946 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
OTOF-205ENST00000403946 GOLGA6L6A8MZA4 724 aa13.99□□□□□ -0.17
OTOF-205ENST00000403946 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
OTOF-205ENST00000403946 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
OTOF-205ENST00000403946 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
OTOF-205ENST00000403946 NUP155O75694 1391 aa13.99□□□□□ -0.17
OTOF-205ENST00000403946 PSME1Q06323 249 aa13.98□□□□□ -0.17
OTOF-205ENST00000403946 FGD1P98174 961 aa13.98□□□□□ -0.17
OTOF-205ENST00000403946 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
OTOF-205ENST00000403946 TAF7LQ5H9L4 462 aa13.97□□□□□ -0.17
OTOF-205ENST00000403946 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
OTOF-205ENST00000403946 HSP90AA2PQ14568 343 aaPredicted RBP13.96□□□□□ -0.18
OTOF-205ENST00000403946 ARID3AQ99856 593 aa13.96□□□□□ -0.18
OTOF-205ENST00000403946 KCNJ4P48050 445 aa13.95□□□□□ -0.18
OTOF-205ENST00000403946 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
OTOF-205ENST00000403946 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
OTOF-205ENST00000403946 FRAT2O75474 233 aaPredicted RBP13.94□□□□□ -0.18
OTOF-205ENST00000403946 TRAK1Q9UPV9 953 aa13.94□□□□□ -0.18
OTOF-205ENST00000403946 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
OTOF-205ENST00000403946 ANKRD30AQ9BXX3 1397 aa13.93□□□□□ -0.18
OTOF-205ENST00000403946 USP35Q9P2H5 1018 aa13.92□□□□□ -0.18
OTOF-205ENST00000403946 NRDCO43847 1150 aa13.91□□□□□ -0.18
OTOF-205ENST00000403946 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.18
OTOF-205ENST00000403946 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
OTOF-205ENST00000403946 GORABQ5T7V8 394 aa13.9□□□□□ -0.18
OTOF-205ENST00000403946 PROSER2Q86WR7 435 aaPredicted RBP13.9□□□□□ -0.18
OTOF-205ENST00000403946 FBXW7Q969H0 707 aa13.9□□□□□ -0.19
OTOF-205ENST00000403946 TERF2IPQ9NYB0 399 aa13.89□□□□□ -0.19
OTOF-205ENST00000403946 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
OTOF-205ENST00000403946 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
OTOF-205ENST00000403946 APBB1O00213 710 aa13.87□□□□□ -0.19
OTOF-205ENST00000403946 U2AF1L5P0DN76 240 aaPredicted RBP13.87□□□□□ -0.19
OTOF-205ENST00000403946 U2AF1Q01081 240 aaKnown RBP eCLIP13.87□□□□□ -0.19
OTOF-205ENST00000403946 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
OTOF-205ENST00000403946 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
OTOF-205ENST00000403946 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
OTOF-205ENST00000403946 AQRO60306 1485 aaKnown RBP eCLIP13.86□□□□□ -0.19
OTOF-205ENST00000403946 FMN1Q68DA7 1419 aa13.86□□□□□ -0.19
OTOF-205ENST00000403946 C1orf141Q5JVX7 400 aa13.86□□□□□ -0.19
OTOF-205ENST00000403946 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
OTOF-205ENST00000403946 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
OTOF-205ENST00000403946 NUTM2GQ5VZR2 741 aa13.85□□□□□ -0.19
OTOF-205ENST00000403946 B4GALNT3Q6L9W6 998 aa13.85□□□□□ -0.19
OTOF-205ENST00000403946 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
OTOF-205ENST00000403946 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
OTOF-205ENST00000403946 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.19
OTOF-205ENST00000403946 HSCBQ8IWL3 235 aa13.83□□□□□ -0.2
OTOF-205ENST00000403946 STRN4Q9NRL3 753 aa13.83□□□□□ -0.2
OTOF-205ENST00000403946 CWC22Q9HCG8 908 aaKnown RBP13.82□□□□□ -0.2
OTOF-205ENST00000403946 RGS3P49796 1198 aa13.82□□□□□ -0.2
OTOF-205ENST00000403946 PTMSP20962 102 aa13.81□□□□□ -0.2
OTOF-205ENST00000403946 DRC7Q8IY82 874 aa13.81□□□□□ -0.2
OTOF-205ENST00000403946 VGFO15240 615 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms