RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 NCOA2Q15596 1464 aa28.16■■■□□ 2.1
CCDC47-202ENST00000403162 PPP1R15AO75807 674 aaPredicted RBP28.16■■■□□ 2.1
CCDC47-202ENST00000403162 DDX10Q13206 875 aaKnown RBP28.14■■■□□ 2.09
CCDC47-202ENST00000403162 NPM1P06748 294 aaKnown RBP eCLIP28.11■■■□□ 2.09
CCDC47-202ENST00000403162 FGD6Q6ZV73 1430 aa28.11■■■□□ 2.09
CCDC47-202ENST00000403162 TSHZ2Q9NRE2 1034 aa28.08■■■□□ 2.09
CCDC47-202ENST00000403162 KIF14Q15058 1648 aa28.07■■■□□ 2.08
CCDC47-202ENST00000403162 CCER2I3L3R5 266 aa28.04■■■□□ 2.08
CCDC47-202ENST00000403162 HFM1A2PYH4 1435 aa28.02■■■□□ 2.08
CCDC47-202ENST00000403162 MYOM3Q5VTT5 1437 aa28.02■■■□□ 2.08
CCDC47-202ENST00000403162 PTPN23Q9H3S7 1636 aa28■■■□□ 2.07
CCDC47-202ENST00000403162 ASXL2Q76L83 1435 aa27.99■■■□□ 2.07
CCDC47-202ENST00000403162 WDR7Q9Y4E6 1490 aa27.98■■■□□ 2.07
CCDC47-202ENST00000403162 TONSLQ96HA7 1378 aa27.96■■■□□ 2.07
CCDC47-202ENST00000403162 ABCC10Q5T3U5 1492 aa27.95■■■□□ 2.06
CCDC47-202ENST00000403162 PTPRKQ15262 1439 aa27.94■■■□□ 2.06
CCDC47-202ENST00000403162 ANP32CO43423 234 aa27.93■■■□□ 2.06
CCDC47-202ENST00000403162 GPATCH8Q9UKJ3 1502 aaKnown RBP27.91■■■□□ 2.06
CCDC47-202ENST00000403162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.9■■■□□ 2.062e-9■■■■□ 23.9
CCDC47-202ENST00000403162 NAIPQ13075 1403 aa27.89■■■□□ 2.06
CCDC47-202ENST00000403162 FKBP8Q14318 412 aa27.88■■■□□ 2.05
CCDC47-202ENST00000403162 TTC37Q6PGP7 1564 aa27.88■■■□□ 2.05
CCDC47-202ENST00000403162 MIA2Q96PC5 1412 aa27.88■■■□□ 2.05
CCDC47-202ENST00000403162 DNAJC5Q9H3Z4 198 aa27.87■■■□□ 2.05
CCDC47-202ENST00000403162 ITSN2Q9NZM3 1697 aa27.87■■■□□ 2.05
CCDC47-202ENST00000403162 HIRIP3Q9BW71 556 aaPredicted RBP27.87■■■□□ 2.05
CCDC47-202ENST00000403162 CFDP1Q9UEE9 299 aaPredicted RBP27.87■■■□□ 2.05
CCDC47-202ENST00000403162 CDC42BPAQ5VT25 1732 aa27.85■■■□□ 2.05
CCDC47-202ENST00000403162 ZNF777Q9ULD5 760 aaPredicted RBP27.81■■■□□ 2.04
CCDC47-202ENST00000403162 TCOF1Q13428 1488 aaKnown RBP27.8■■■□□ 2.04
CCDC47-202ENST00000403162 NEFLP07196 543 aa27.79■■■□□ 2.04
CCDC47-202ENST00000403162 ZNF644Q9H582 1327 aaPredicted RBP27.79■■■□□ 2.04
CCDC47-202ENST00000403162 BCANQ96GW7 911 aa27.79■■■□□ 2.04
CCDC47-202ENST00000403162 PREX2Q70Z35 1606 aa27.78■■■□□ 2.04
CCDC47-202ENST00000403162 MYO5CQ9NQX4 1742 aa27.77■■■□□ 2.04
CCDC47-202ENST00000403162 GCC2Q8IWJ2 1684 aa27.76■■■□□ 2.03
CCDC47-202ENST00000403162 ABCA9Q8IUA7 1624 aa27.75■■■□□ 2.03
CCDC47-202ENST00000403162 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
CCDC47-202ENST00000403162 ARHGAP5Q13017 1502 aa27.75■■■□□ 2.03
CCDC47-202ENST00000403162 PLCH2O75038 1416 aa27.74■■■□□ 2.03
CCDC47-202ENST00000403162 TRIM52Q96A61 297 aa27.73■■■□□ 2.03
CCDC47-202ENST00000403162 CAMSAP2Q08AD1 1489 aa27.73■■■□□ 2.03
CCDC47-202ENST00000403162 AKNAQ7Z591 1439 aa27.7■■■□□ 2.02
CCDC47-202ENST00000403162 ANP32EQ9BTT0 268 aa27.69■■■□□ 2.02
CCDC47-202ENST00000403162 EFCAB2Q5VUJ9 269 aa27.66■■■□□ 2.02
CCDC47-202ENST00000403162 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
CCDC47-202ENST00000403162 CD109Q6YHK3 1445 aa27.65■■■□□ 2.02
CCDC47-202ENST00000403162 ARAP3Q8WWN8 1544 aa27.63■■■□□ 2.01
CCDC47-202ENST00000403162 DENND4BO75064 1496 aaPredicted RBP27.63■■■□□ 2.01
CCDC47-202ENST00000403162 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
CCDC47-202ENST00000403162 HNRNPMP52272 730 aaKnown RBP eCLIP27.6■■■□□ 2.01
CCDC47-202ENST00000403162 DAPK1P53355 1430 aa27.6■■■□□ 2.01
CCDC47-202ENST00000403162 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
CCDC47-202ENST00000403162 GLI2P10070 1586 aa27.6■■■□□ 2.01
CCDC47-202ENST00000403162 DNMT1P26358 1616 aaKnown RBP27.6■■■□□ 2.01
CCDC47-202ENST00000403162 FANCAO15360 1455 aa27.59■■■□□ 2.01
CCDC47-202ENST00000403162 ABCC5O15440 1437 aa27.59■■■□□ 2.01
CCDC47-202ENST00000403162 CHIC2Q9UKJ5 165 aa27.58■■■□□ 2
CCDC47-202ENST00000403162 PLEKHH2Q8IVE3 1493 aa27.57■■■□□ 2
CCDC47-202ENST00000403162 SYCP2Q9BX26 1530 aa27.55■■■□□ 2
CCDC47-202ENST00000403162 KDM6BO15054 1643 aa27.54■■■□□ 2
CCDC47-202ENST00000403162 MAP3K4Q9Y6R4 1608 aa27.54■■■□□ 2
CCDC47-202ENST00000403162 RRP7BPQ9NSQ0 103 aa27.54■■■□□ 2
CCDC47-202ENST00000403162 WASHC2AQ641Q2 1341 aa27.54■■■□□ 2
CCDC47-202ENST00000403162 MBD5Q9P267 1494 aa27.54■■■□□ 2
CCDC47-202ENST00000403162 KIAA1107Q9UPP5 1409 aa27.53■■■□□ 2
CCDC47-202ENST00000403162 HSPA5P11021 654 aaKnown RBP27.53■■■□□ 2
CCDC47-202ENST00000403162 ABCC1P33527 1531 aa27.51■■■□□ 2
CCDC47-202ENST00000403162 ARHGEF5Q12774 1597 aa27.51■■□□□ 1.99
CCDC47-202ENST00000403162 RBM19Q9Y4C8 960 aaKnown RBP27.5■■□□□ 1.99
CCDC47-202ENST00000403162 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
CCDC47-202ENST00000403162 RSPH4AQ5TD94 716 aa27.49■■□□□ 1.99
CCDC47-202ENST00000403162 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
CCDC47-202ENST00000403162 CROCC2H7BZ55 1655 aa27.48■■□□□ 1.99
CCDC47-202ENST00000403162 TSPY4P0CV99 314 aa27.48■■□□□ 1.99
CCDC47-202ENST00000403162 TSPY10P0CW01 314 aa27.48■■□□□ 1.99
CCDC47-202ENST00000403162 EIF4G2P78344 907 aaKnown RBP eCLIP27.47■■□□□ 1.99
CCDC47-202ENST00000403162 CNTLNQ9NXG0 1405 aa27.47■■□□□ 1.99
CCDC47-202ENST00000403162 CFAP74Q9C0B2 1584 aa27.47■■□□□ 1.99
CCDC47-202ENST00000403162 ADGRL1O94910 1474 aa27.46■■□□□ 1.99
CCDC47-202ENST00000403162 HNRNPUQ00839 825 aaKnown RBP eCLIP27.46■■□□□ 1.99
CCDC47-202ENST00000403162 KIF13AQ9H1H9 1805 aa27.45■■□□□ 1.99
CCDC47-202ENST00000403162 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
CCDC47-202ENST00000403162 SCAPERQ9BY12 1400 aa27.44■■□□□ 1.98
CCDC47-202ENST00000403162 MPHOSPH9Q99550 1183 aa27.43■■□□□ 1.98
CCDC47-202ENST00000403162 SHANK2Q9UPX8 1470 aa27.43■■□□□ 1.98
CCDC47-202ENST00000403162 TRAPPC8Q9Y2L5 1435 aa27.43■■□□□ 1.98
CCDC47-202ENST00000403162 ROCK1Q13464 1354 aa27.42■■□□□ 1.98
CCDC47-202ENST00000403162 TSPOAP1O95153 1857 aa27.42■■□□□ 1.98
CCDC47-202ENST00000403162 NEO1Q92859 1461 aa27.41■■□□□ 1.98
CCDC47-202ENST00000403162 NCOA1Q15788 1441 aa27.41■■□□□ 1.98
CCDC47-202ENST00000403162 ADGBQ8N7X0 1667 aa27.39■■□□□ 1.98
CCDC47-202ENST00000403162 AFAP1Q8N556 730 aa27.39■■□□□ 1.97
CCDC47-202ENST00000403162 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
CCDC47-202ENST00000403162 ADGRL2O95490 1459 aa27.37■■□□□ 1.97
CCDC47-202ENST00000403162 L3MBTL2Q969R5 705 aa27.37■■□□□ 1.97
CCDC47-202ENST00000403162 RPRD2Q5VT52 1461 aaKnown RBP27.36■■□□□ 1.97
CCDC47-202ENST00000403162 PPRC1Q5VV67 1664 aaKnown RBP27.35■■□□□ 1.97
CCDC47-202ENST00000403162 ERICH6BQ5W0A0 696 aa27.35■■□□□ 1.97
CCDC47-202ENST00000403162 TEX14Q8IWB6 1497 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms