RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
FAM47DP-201ENST00000402340 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
FAM47DP-201ENST00000402340 L3MBTL2Q969R5 705 aa17.31■□□□□ 0.36
FAM47DP-201ENST00000402340 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
FAM47DP-201ENST00000402340 ABCC5O15440 1437 aa17.28■□□□□ 0.36
FAM47DP-201ENST00000402340 C11orf95C9JLR9 678 aaPredicted RBP17.27■□□□□ 0.36
FAM47DP-201ENST00000402340 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
FAM47DP-201ENST00000402340 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
FAM47DP-201ENST00000402340 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
FAM47DP-201ENST00000402340 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
FAM47DP-201ENST00000402340 NBPF8Q3BBV2 869 aa17.23■□□□□ 0.35
FAM47DP-201ENST00000402340 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
FAM47DP-201ENST00000402340 KIAA0586Q9BVV6 1533 aa17.23■□□□□ 0.35
FAM47DP-201ENST00000402340 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
FAM47DP-201ENST00000402340 MBD5Q9P267 1494 aa17.22■□□□□ 0.35
FAM47DP-201ENST00000402340 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
FAM47DP-201ENST00000402340 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.35
FAM47DP-201ENST00000402340 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
FAM47DP-201ENST00000402340 PZPP20742 1482 aa17.2■□□□□ 0.34
FAM47DP-201ENST00000402340 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
FAM47DP-201ENST00000402340 FOXD1Q16676 465 aa17.18■□□□□ 0.34
FAM47DP-201ENST00000402340 KIF7Q2M1P5 1343 aa17.18■□□□□ 0.34
FAM47DP-201ENST00000402340 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
FAM47DP-201ENST00000402340 MSH5O43196 834 aa17.17■□□□□ 0.34
FAM47DP-201ENST00000402340 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
FAM47DP-201ENST00000402340 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
FAM47DP-201ENST00000402340 ADGBQ8N7X0 1667 aa17.16■□□□□ 0.34
FAM47DP-201ENST00000402340 ADCY10Q96PN6 1610 aa17.15■□□□□ 0.34
FAM47DP-201ENST00000402340 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
FAM47DP-201ENST00000402340 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
FAM47DP-201ENST00000402340 ITSN2Q9NZM3 1697 aa17.14■□□□□ 0.33
FAM47DP-201ENST00000402340 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
FAM47DP-201ENST00000402340 ZNF644Q9H582 1327 aaPredicted RBP17.13■□□□□ 0.33
FAM47DP-201ENST00000402340 CAMSAP2Q08AD1 1489 aa17.13■□□□□ 0.33
FAM47DP-201ENST00000402340 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
FAM47DP-201ENST00000402340 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
FAM47DP-201ENST00000402340 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
FAM47DP-201ENST00000402340 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
FAM47DP-201ENST00000402340 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
FAM47DP-201ENST00000402340 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
FAM47DP-201ENST00000402340 KIF14Q15058 1648 aa17.11■□□□□ 0.33
FAM47DP-201ENST00000402340 KIAA1107Q9UPP5 1409 aa17.11■□□□□ 0.33
FAM47DP-201ENST00000402340 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
FAM47DP-201ENST00000402340 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
FAM47DP-201ENST00000402340 BCORL1Q5H9F3 1711 aa17.09■□□□□ 0.33
FAM47DP-201ENST00000402340 KDM5CP41229 1560 aa17.09■□□□□ 0.33
FAM47DP-201ENST00000402340 UHRF1BP1Q6BDS2 1440 aa17.09■□□□□ 0.33
FAM47DP-201ENST00000402340 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.33
FAM47DP-201ENST00000402340 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
FAM47DP-201ENST00000402340 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
FAM47DP-201ENST00000402340 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
FAM47DP-201ENST00000402340 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
FAM47DP-201ENST00000402340 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
FAM47DP-201ENST00000402340 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
FAM47DP-201ENST00000402340 USP47Q96K76 1375 aa17.03■□□□□ 0.32
FAM47DP-201ENST00000402340 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
FAM47DP-201ENST00000402340 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
FAM47DP-201ENST00000402340 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
FAM47DP-201ENST00000402340 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
FAM47DP-201ENST00000402340 MAGI1Q96QZ7 1491 aaPredicted RBP17■□□□□ 0.31
FAM47DP-201ENST00000402340 CEP170Q5SW79 1584 aa17■□□□□ 0.31
FAM47DP-201ENST00000402340 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
FAM47DP-201ENST00000402340 ANKRD30AQ9BXX3 1397 aa17■□□□□ 0.31
FAM47DP-201ENST00000402340 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
FAM47DP-201ENST00000402340 ANKRD50Q9ULJ7 1429 aa16.98■□□□□ 0.31
FAM47DP-201ENST00000402340 CDC42BPAQ5VT25 1732 aa16.98■□□□□ 0.31
FAM47DP-201ENST00000402340 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
FAM47DP-201ENST00000402340 PTPRGP23470 1445 aa16.97■□□□□ 0.31
FAM47DP-201ENST00000402340 NUDCQ9Y266 331 aa16.97■□□□□ 0.31
FAM47DP-201ENST00000402340 PKD2Q13563 968 aa16.96■□□□□ 0.31
FAM47DP-201ENST00000402340 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
FAM47DP-201ENST00000402340 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
FAM47DP-201ENST00000402340 ABCA8O94911 1581 aa16.94■□□□□ 0.3
FAM47DP-201ENST00000402340 NUP160Q12769 1436 aa16.94■□□□□ 0.3
FAM47DP-201ENST00000402340 E9PCH4 1651 aa16.94■□□□□ 0.3
FAM47DP-201ENST00000402340 PNISRQ8TF01 805 aaKnown RBP16.94■□□□□ 0.3
FAM47DP-201ENST00000402340 LRPPRCP42704 1394 aaKnown RBP16.94■□□□□ 0.3
FAM47DP-201ENST00000402340 KTN1Q86UP2 1357 aaKnown RBP16.94■□□□□ 0.3
FAM47DP-201ENST00000402340 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
FAM47DP-201ENST00000402340 C9orf84Q5VXU9 1444 aa16.91■□□□□ 0.3
FAM47DP-201ENST00000402340 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
FAM47DP-201ENST00000402340 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
FAM47DP-201ENST00000402340 KIF15Q9NS87 1388 aa16.89■□□□□ 0.3
FAM47DP-201ENST00000402340 BRD4O60885 1362 aaPredicted RBP16.88■□□□□ 0.29
FAM47DP-201ENST00000402340 NUP155O75694 1391 aa16.87■□□□□ 0.29
FAM47DP-201ENST00000402340 ATP10BO94823 1461 aa16.87■□□□□ 0.29
FAM47DP-201ENST00000402340 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
FAM47DP-201ENST00000402340 ZNF777Q9ULD5 760 aaPredicted RBP16.84■□□□□ 0.29
FAM47DP-201ENST00000402340 RALBP1Q15311 655 aa16.84■□□□□ 0.29
FAM47DP-201ENST00000402340 CARD11Q9BXL7 1154 aa16.84■□□□□ 0.29
FAM47DP-201ENST00000402340 JPH4Q96JJ6 628 aa16.83■□□□□ 0.29
FAM47DP-201ENST00000402340 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.29
FAM47DP-201ENST00000402340 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
FAM47DP-201ENST00000402340 TRPM1Q7Z4N2 1603 aa16.82■□□□□ 0.28
FAM47DP-201ENST00000402340 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
FAM47DP-201ENST00000402340 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
FAM47DP-201ENST00000402340 LAMC1P11047 1609 aa16.81■□□□□ 0.28
FAM47DP-201ENST00000402340 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
FAM47DP-201ENST00000402340 TMC1Q8TDI8 760 aa16.8■□□□□ 0.28
FAM47DP-201ENST00000402340 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms